Miyakogusa Predicted Gene

Lj1g3v2143350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2143350.1 Non Characterized Hit- tr|I1KGM6|I1KGM6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,97.26,0,TIP49,TIP49,
C-terminal; P-loop containing nucleoside triphosphate hydrolases,NULL;
Nucleic acid-bin,CUFF.28641.1
         (401 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g104080.1 | DNA helicase TIP49 TBP-interacting protein | H...   795   0.0  
Medtr3g104080.2 | DNA helicase TIP49 TBP-interacting protein | H...   709   0.0  
Medtr6g023370.1 | DNA helicase TIP49 TBP-interacting protein | H...   704   0.0  
Medtr3g061640.1 | P-loop nucleoside triphosphate hydrolase super...   308   5e-84

>Medtr3g104080.1 | DNA helicase TIP49 TBP-interacting protein | HC |
           chr3:47958173-47951407 | 20130731
          Length = 458

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/401 (96%), Positives = 395/401 (98%)

Query: 1   MIRQKKMAGRALLLAGPPGTGKTALALGICQELGTKVPFCPMVGSEVYSSEVKKTEVLME 60
           MIRQKKMAG+ALLLAGPPGTGKTALALGICQELGTKVPFCPMVGSEVYS+EVKKTEVLME
Sbjct: 58  MIRQKKMAGKALLLAGPPGTGKTALALGICQELGTKVPFCPMVGSEVYSTEVKKTEVLME 117

Query: 61  NFRRAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDP 120
           NFRRAIGLRIKENKEVYEGEVTELSPEETES+TGGYGKSISHVIIGLKTVKGTKQLKLDP
Sbjct: 118 NFRRAIGLRIKENKEVYEGEVTELSPEETESITGGYGKSISHVIIGLKTVKGTKQLKLDP 177

Query: 121 TIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEI 180
           TIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEI
Sbjct: 178 TIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEI 237

Query: 181 VQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKVVNRYIDEGVAEL 240
           VQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQE+NKVVNRYIDEGVAEL
Sbjct: 238 VQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAEL 297

Query: 241 VPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMASPHGIPVDLL 300
           VPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGIC VRGTDM SPHGIPVDLL
Sbjct: 298 VPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICTVRGTDMTSPHGIPVDLL 357

Query: 301 DRLAIVRTLIYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQRTSLRHAVQLLSPASI 360
           DRL I+RT  YGPAE+IQILAIRAQVEEL VDEESLAFLGEIGQRTSLRHAVQLLSPAS+
Sbjct: 358 DRLVIIRTQTYGPAEIIQILAIRAQVEELAVDEESLAFLGEIGQRTSLRHAVQLLSPASV 417

Query: 361 VAKMNGRDNICKADLDEVCSLYLDAKSSAKLLQEQQEKYIT 401
           VAK+NGRDNICKADLDE+CSLYLDAKSSAKLLQEQQEKYI+
Sbjct: 418 VAKINGRDNICKADLDEICSLYLDAKSSAKLLQEQQEKYIS 458


>Medtr3g104080.2 | DNA helicase TIP49 TBP-interacting protein | HC |
           chr3:47958148-47951408 | 20130731
          Length = 360

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/360 (95%), Positives = 354/360 (98%)

Query: 42  MVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSIS 101
           MVGSEVYS+EVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEETES+TGGYGKSIS
Sbjct: 1   MVGSEVYSTEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEETESITGGYGKSIS 60

Query: 102 HVIIGLKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDL 161
           HVIIGLKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDL
Sbjct: 61  HVIIGLKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDL 120

Query: 162 EAEEYVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKL 221
           EAEEYVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKL
Sbjct: 121 EAEEYVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKL 180

Query: 222 RQEVNKVVNRYIDEGVAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGI 281
           RQE+NKVVNRYIDEGVAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGI
Sbjct: 181 RQEINKVVNRYIDEGVAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGI 240

Query: 282 CNVRGTDMASPHGIPVDLLDRLAIVRTLIYGPAEMIQILAIRAQVEELVVDEESLAFLGE 341
           C VRGTDM SPHGIPVDLLDRL I+RT  YGPAE+IQILAIRAQVEEL VDEESLAFLGE
Sbjct: 241 CTVRGTDMTSPHGIPVDLLDRLVIIRTQTYGPAEIIQILAIRAQVEELAVDEESLAFLGE 300

Query: 342 IGQRTSLRHAVQLLSPASIVAKMNGRDNICKADLDEVCSLYLDAKSSAKLLQEQQEKYIT 401
           IGQRTSLRHAVQLLSPAS+VAK+NGRDNICKADLDE+CSLYLDAKSSAKLLQEQQEKYI+
Sbjct: 301 IGQRTSLRHAVQLLSPASVVAKINGRDNICKADLDEICSLYLDAKSSAKLLQEQQEKYIS 360


>Medtr6g023370.1 | DNA helicase TIP49 TBP-interacting protein | HC |
           chr6:8152582-8155828 | 20130731
          Length = 433

 Score =  704 bits (1818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/401 (87%), Positives = 364/401 (90%), Gaps = 22/401 (5%)

Query: 1   MIRQKKMAGRALLLAGPPGTGKTALALGICQELGTKVPFCPMVGSEVYSSEVKKTEVLME 60
           MIRQKKMAG+ALLLAGPPGTGKTALALGICQ++                       VLME
Sbjct: 55  MIRQKKMAGKALLLAGPPGTGKTALALGICQDI--------------------LNGVLME 94

Query: 61  NFRRAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDP 120
           NFRRAIGLRIKENKEVYEGEVTELSPEETES+T  YGKSISHVIIGLKTVKGTKQLKLDP
Sbjct: 95  NFRRAIGLRIKENKEVYEGEVTELSPEETESITEDYGKSISHVIIGLKTVKGTKQLKLDP 154

Query: 121 TIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEI 180
           TIYDALIKEKVAV DVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEI
Sbjct: 155 TIYDALIKEKVAVRDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEI 214

Query: 181 VQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKVVNRYIDEGVAEL 240
             DVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQE+NKVVNRYIDEGVAEL
Sbjct: 215 --DVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAEL 272

Query: 241 VPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMASPHGIPVDLL 300
           VPGVLFIDEVHMLDMECFSYLNRALESSLS IVIFATNRGIC VRGTDM SPHGIPVDLL
Sbjct: 273 VPGVLFIDEVHMLDMECFSYLNRALESSLSSIVIFATNRGICTVRGTDMTSPHGIPVDLL 332

Query: 301 DRLAIVRTLIYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQRTSLRHAVQLLSPASI 360
           DRL I+RT  YGPAE+IQILAIRAQVEELVVDEESLAFLGEIGQ TSLRHAVQLLSPAS+
Sbjct: 333 DRLVIIRTHTYGPAEIIQILAIRAQVEELVVDEESLAFLGEIGQWTSLRHAVQLLSPASV 392

Query: 361 VAKMNGRDNICKADLDEVCSLYLDAKSSAKLLQEQQEKYIT 401
           V K+NGRDNICKADL+E+CSLYLDAKSSAKLL EQQEKYI+
Sbjct: 393 VTKINGRDNICKADLEEICSLYLDAKSSAKLLHEQQEKYIS 433


>Medtr3g061640.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr3:24606207-24601804 |
           20130731
          Length = 465

 Score =  308 bits (790), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 183/409 (44%), Positives = 263/409 (64%), Gaps = 27/409 (6%)

Query: 1   MIRQKKMAGRALLLAGPPGTGKTALALGICQELGTKVPFCPMVGSEVYSSEVKKTEVLME 60
           MI+  K+AGRA+LLAG PGTGKTA+A+G+ + LG + PF  + GSE++S E+ KTE L +
Sbjct: 58  MIKDGKIAGRAVLLAGQPGTGKTAIAMGMAKSLGLETPFAMIAGSELFSLEMSKTEALTQ 117

Query: 61  NFRRAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDP 120
            FR+AIG+RIKE  EV EGEV E+  +   +V G   K+      G  T+K T+      
Sbjct: 118 AFRKAIGVRIKEETEVIEGEVVEVQIDRP-AVAGAAAKT------GKLTLKSTEM----E 166

Query: 121 TIYD-------ALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPK 171
           T+YD       A+ KEKV  GDVI I+  SG + ++GRS + + +FD    +  +V  P 
Sbjct: 167 TVYDLGAKMIEAIGKEKVTSGDVIAIDKASGKITKLGRSFSRSRDFDAMGPQVKFVQCPD 226

Query: 172 GEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKVVNR 231
           GE+ K+KE+V  VTLH++D  N+R QG    L+L          EI  ++R++++  V  
Sbjct: 227 GELQKRKEVVHCVTLHEIDVINSRTQG---FLALF----TGDTGEIRAEVREQIDTKVAE 279

Query: 232 YIDEGVAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMAS 291
           + +EG AE+VPGVLFIDEVHMLD+ECFS+LNRALE+ +SPI++ ATNRGI  +RGT+  S
Sbjct: 280 WKEEGKAEIVPGVLFIDEVHMLDIECFSFLNRALENEMSPILVVATNRGITTIRGTNYKS 339

Query: 292 PHGIPVDLLDRLAIVRTLIYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQRTSLRHA 351
           PHGIP+DLLDRL I+ T  Y   E+ +IL IR Q E++ + E +   L +IG  TSLR+A
Sbjct: 340 PHGIPIDLLDRLLIISTQPYTEDEIRKILDIRCQEEDVDMSEGAKHLLTKIGVETSLRYA 399

Query: 352 VQLLSPASIVAKMNGRDNICKADLDEVCSLYLDAKSSAKLLQEQQEKYI 400
           + L++ A++  +      +   D++ V +L+LD K S + L E Q +Y+
Sbjct: 400 IHLITAAALACQKRKGKTVELDDINRVYNLFLDVKRSTQYLMEYQSQYM 448