Miyakogusa Predicted Gene

Lj1g3v2126140.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2126140.1 Non Characterized Hit- tr|I1JDN0|I1JDN0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19114 PE,66.67,2e-19,
,CUFF.28573.1
         (128 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g082970.1 | transmembrane protein, putative | LC | chr7:31...    74   2e-14

>Medtr7g082970.1 | transmembrane protein, putative | LC |
           chr7:31836637-31834056 | 20130731
          Length = 211

 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/70 (64%), Positives = 49/70 (70%), Gaps = 5/70 (7%)

Query: 48  ALQSQRTPSSKANTTYTSLLQFPSIRCCSTLNQKNNIN--LRTCKNCKTQFDPALNHPRA 105
           A QSQ  PSSK N  +   LQFPSI+C S+ N K + N  LRTCKNCKTQFDP LNHP A
Sbjct: 22  AFQSQIIPSSKPNIHF---LQFPSIQCSSSSNNKTSSNINLRTCKNCKTQFDPQLNHPLA 78

Query: 106 GRFHTAHNGA 115
            RFHTAH G 
Sbjct: 79  CRFHTAHFGG 88