Miyakogusa Predicted Gene

Lj1g3v2124920.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2124920.2 Non Characterized Hit- tr|I1KQB7|I1KQB7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45155
PE,83.22,0,seg,NULL; NUCLEOPORIN 155,NULL; NUCLEAR PORE COMPLEX
PROTEIN NUP155,Nucleoporin, Nup155-like; Nucleo,CUFF.28560.2
         (1026 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g105290.1 | nuclear pore complex Nup155-like protein | HC ...  1615   0.0  

>Medtr8g105290.1 | nuclear pore complex Nup155-like protein | HC |
            chr8:44427185-44416638 | 20130731
          Length = 1484

 Score = 1615 bits (4181), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 815/1043 (78%), Positives = 880/1043 (84%), Gaps = 18/1043 (1%)

Query: 1    MALAGRPQNKDLSLKVEAAYYSAGTLILSDASPSTMPSLLVLNRDSSTQSSPSGNLGTGI 60
            MALAGRPQN+DLSLKVEAAYYSAGTLILSDASP TMPSLLVLNRDSSTQSSPSGNLGTG 
Sbjct: 397  MALAGRPQNEDLSLKVEAAYYSAGTLILSDASPPTMPSLLVLNRDSSTQSSPSGNLGTGT 456

Query: 61   RSSRASRESVSCLPVEGRMLSAADVLPLPDNAATMWSLYSEIEFGGYENLMESCERASGK 120
            RSSRA RE+VS LPVEGRMLS ADVLPLPD +AT+ SLYSEIEFGGYE+ MESCERASGK
Sbjct: 457  RSSRALRETVSSLPVEGRMLSVADVLPLPDTSATVQSLYSEIEFGGYESSMESCERASGK 516

Query: 121  LWARGDLSTQHILPRRRLVVFSTMGMMEIVFNRPLDILRRLLESNSPRSVLEDFFNHFGA 180
            LWARGDLSTQHILPRRR+V+FSTMGMMEIVFNRPLDILRRLLES+SPRSVLEDFFN FGA
Sbjct: 517  LWARGDLSTQHILPRRRIVIFSTMGMMEIVFNRPLDILRRLLESSSPRSVLEDFFNRFGA 576

Query: 181  DEAAAMCLLLAARIVHSENLISNVISEKAAEAFEDPGLVGMPQLEGS-------STAGGC 233
             EA+AMCL+LA+RIVHSEN ISNVI+EKAAEAFEDP LVGMPQLEGS       + AGG 
Sbjct: 577  GEASAMCLMLASRIVHSENFISNVIAEKAAEAFEDPRLVGMPQLEGSNALSNTRTAAGGF 636

Query: 234  SMGLVVQEAEPVFSSTYEGLCLCSSRLLFPLWELSVMVVKGSLGPSGTLSENGVVVCRFS 293
            SMG VVQEAEPVFS  +EGLCLCSSRLLFPLWEL VMV+KGSL  SGT  ENGVVVCR S
Sbjct: 637  SMGQVVQEAEPVFSGAHEGLCLCSSRLLFPLWELPVMVIKGSLSASGTSFENGVVVCRLS 696

Query: 294  VGAMQVLELKLRSLEKFLXXXXXXXXGLYGCLAGLGDVXXXXXXXXXXXXXXXDQSMVRS 353
            + AMQVLE KLRSLEKFL        GLYGC+AGLGDV               D+SMVR+
Sbjct: 697  IEAMQVLEHKLRSLEKFLRSRRNQRRGLYGCVAGLGDVSGSILYGGGSALGAGDRSMVRT 756

Query: 354  LFGAYSRNMESNSGGNTNQRESFPYSPAELASLEVRAMECIRQLLLRSGEALFLLQLLSQ 413
            LFGAYS+NMESN GG  N+R+  PYSPAELA++EVRAMECIRQLLLRSGEALFLLQLLSQ
Sbjct: 757  LFGAYSKNMESNGGGAANKRQRLPYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQ 816

Query: 414  HQVTHLIQGFDANLQQALAQLTFHQLVCSEEGDRLATRLISAVMEYYTGPDGRGTVDDIS 473
            H VT LIQGFDANLQQAL QLTFHQLVCSEEGD LATRLISA+MEYYTG DGRGTVDDIS
Sbjct: 817  HHVTRLIQGFDANLQQALVQLTFHQLVCSEEGDHLATRLISALMEYYTGTDGRGTVDDIS 876

Query: 474  RRLREGCPSYYKESVYKFFLAVEALERAAVTVDADEKENLAREALNSLSEVPESANLRTV 533
            +RLREGCPSYYKES YKFFLAVEALERAAVT+D +EKE LAREALN+LS+VPESA+LRTV
Sbjct: 877  KRLREGCPSYYKESDYKFFLAVEALERAAVTIDDEEKETLAREALNALSKVPESADLRTV 936

Query: 534  CKRFEVLRFYEAVVFLPLQKALALDPEGDAYDDKIDATIRGQELAHREQCYEVIISALRS 593
            CKRFE LRFYEAVV LPLQKA A+DP GDAY+D+IDAT+R Q LA REQCYE+IISALRS
Sbjct: 937  CKRFEDLRFYEAVVCLPLQKAQAIDPAGDAYNDEIDATVREQALAQREQCYEIIISALRS 996

Query: 594  LKGDTFQKEFGSPIRSAASQSALDPASRRKYISKIVQLGVQSPDSIFHEYLYQAMIDXXX 653
            LKGD  +KEFGSPI SA SQSALDPASR+KYIS+IVQLGVQSPD IFHEYLYQAMID   
Sbjct: 997  LKGDPSRKEFGSPIGSA-SQSALDPASRKKYISQIVQLGVQSPDRIFHEYLYQAMIDLGL 1055

Query: 654  XXXXXXXXXPDLLPFLQSAGRKPIQEVCAVTATSSPIRNLEAPMSSNHAKFYELLARYYV 713
                     PDLLPFL+SAGR PI EV AVTAT+SP+    APMSSN  K++ELLARYYV
Sbjct: 1056 ENELLEYGGPDLLPFLKSAGRTPIHEVRAVTATTSPMGQSGAPMSSNQVKYFELLARYYV 1115

Query: 714  LKRQHMXXXXXXXXXXXXXSIDGVPTLEQRCQYLSNAVLQEKNATNNDRLVSSTRSSFDS 773
            LKRQHM             S DGVPTLEQRCQYLSNAVLQ KNATN+D LVSSTRSS D+
Sbjct: 1116 LKRQHMLAAHALLRLAGRPSTDGVPTLEQRCQYLSNAVLQAKNATNSDGLVSSTRSSSDT 1175

Query: 774  EFLDLLEGKLAVLRFQIKIKQELEAMTSRSEVLHGTPGSVQNDLVPEGSSTADANFVNAI 833
              LD+LEGKLAVLRFQIKIK+ELE M S SEVLH T  SV+N LV + S T DANF NA 
Sbjct: 1176 GLLDMLEGKLAVLRFQIKIKEELEHMASSSEVLHSTSNSVENGLVSDASPTVDANFANAT 1235

Query: 834  REKAKELSADLKSITQLYNEYAVPFELWEICLEMLYFAIHSGENDSSVVRETWARLIDQA 893
            REKAKELS+DLKSITQLYNEYAVPF+LWE CLEMLYFA +SG++DSS+VRETWARLIDQA
Sbjct: 1236 REKAKELSSDLKSITQLYNEYAVPFKLWETCLEMLYFANYSGDSDSSIVRETWARLIDQA 1295

Query: 894  ISRGGVAEACSVLKRVGPRIYLGDGAVLPLDIICFHLEKAGLERLNSGVEPVGDEDVARA 953
            IS GG+AEACSVLKR+GPR+Y GDG V  LDIIC HLEKA LERLN+GVE VGDEDVARA
Sbjct: 1296 ISGGGIAEACSVLKRLGPRLYPGDGTVFQLDIICLHLEKAALERLNTGVESVGDEDVARA 1355

Query: 954  LVSACNGAAEPVLDAYDQLLSNGAIFPSPNLRLRMLSSVLVILHEWAMSVYSQ------- 1006
            LVSAC GAAEPVL+AYDQLLSNGAI PSPNLRLRML SVLV+L EWAMS+YS        
Sbjct: 1356 LVSACKGAAEPVLNAYDQLLSNGAILPSPNLRLRMLRSVLVVLREWAMSIYSHRMGTGAT 1415

Query: 1007 ---ITMEGEFSLEHPVASQGLRD 1026
               I + G FSLE  VASQG+RD
Sbjct: 1416 GSSIIIGGGFSLERTVASQGIRD 1438