Miyakogusa Predicted Gene
- Lj1g3v2124820.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2124820.1 CUFF.28553.1
(349 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g111810.1 | transducin/WD-40 repeat protein | HC | chr4:46... 616 e-177
Medtr4g111810.2 | transducin/WD-40 repeat protein | HC | chr4:46... 592 e-169
Medtr4g077783.1 | transducin/WD-40 repeat protein | HC | chr4:29... 591 e-169
Medtr4g077783.2 | transducin/WD-40 repeat protein | HC | chr4:29... 534 e-152
Medtr1g076780.1 | transducin/WD-40 repeat protein | HC | chr1:34... 283 2e-76
Medtr4g119620.1 | transducin/WD40 repeat protein | HC | chr4:495... 64 2e-10
Medtr7g086360.1 | U5 small nuclear ribonucleoprotein 40 kDa-like... 62 9e-10
Medtr4g011950.1 | coatomer subunit beta-like protein | HC | chr4... 54 3e-07
Medtr2g102277.4 | coatomer subunit beta-like protein | HC | chr2... 53 3e-07
Medtr2g102277.1 | coatomer subunit beta-like protein | HC | chr2... 53 3e-07
Medtr2g102277.2 | coatomer subunit beta-like protein | HC | chr2... 53 4e-07
Medtr2g102277.3 | coatomer subunit beta-like protein | HC | chr2... 53 4e-07
Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protei... 52 7e-07
Medtr2g016690.1 | transducin/WD-like repeat-protein | HC | chr2:... 52 9e-07
Medtr7g114370.1 | transducin/WD40 repeat protein | HC | chr7:472... 50 5e-06
>Medtr4g111810.1 | transducin/WD-40 repeat protein | HC |
chr4:46200399-46208312 | 20130731
Length = 420
Score = 616 bits (1589), Expect = e-177, Method: Compositional matrix adjust.
Identities = 300/359 (83%), Positives = 325/359 (90%), Gaps = 10/359 (2%)
Query: 1 MEINLGKLGFDIDFHPSDNLVAAGLISGDFHIYRYSSDSNDNDPVRLLEVHAHTESCRAA 60
MEINLGKL FDIDFHPS+NLVA+GLI GD H+YRYSSD+ ++DPVR+LEVHAHTESCRAA
Sbjct: 62 MEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAA 121
Query: 61 RFINGGRVLLTGSPDCSILATDVETGSTITRIDNAHEAAINRLINLTESTVASGDDEGCI 120
RFINGGR +LTGSPD SILATDVETGSTI R+DNAHEAA+NRLINLTESTVASGDD+GCI
Sbjct: 122 RFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 181
Query: 121 KVWDIREQSCCNSFDVHEDYISDMTFASDAMKLLATSGDGTLSVCNLRRNKVQAQSEFSE 180
KVWD RE+SCCNSF+ HEDYISD+TFASDAMK+LATSGDGTLSVCNLRRNKVQAQSEFSE
Sbjct: 182 KVWDTRERSCCNSFEAHEDYISDITFASDAMKILATSGDGTLSVCNLRRNKVQAQSEFSE 241
Query: 181 DELLSVVLMKNGRKVVCGSQTGIILLYSWGCFKDCSDRFVDLSSNSLDTMVKLDEDRIIT 240
DELLSVVLMKNGRKVVCGSQTGI+LLYSWGCFKDCSDRFVDL+SNS+DTM+KLDEDRIIT
Sbjct: 242 DELLSVVLMKNGRKVVCGSQTGILLLYSWGCFKDCSDRFVDLASNSIDTMLKLDEDRIIT 301
Query: 241 GSENGMINLVGILPNRIIQPIAEHSEYPVERLAFSHDRKFLGSIAHDQLLKLWDLDNILQ 300
GSENGMINLVGILPNRII+PIAEHSEYPVERLAFSHDRKFLGSI HDQ+LKLWDLDNILQ
Sbjct: 302 GSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDNILQ 361
Query: 301 DSRSTQRNETGVIXXXXXX-----XXXXXXPSKFSEGNKRKDANNG-----SNNFFADL 349
SRSTQRNETGV+ SKFS+GNKRK+A+NG SNNFFADL
Sbjct: 362 GSRSTQRNETGVVANDGDSDDGDEMDVDNSASKFSKGNKRKNASNGHAVGDSNNFFADL 420
>Medtr4g111810.2 | transducin/WD-40 repeat protein | HC |
chr4:46200399-46207528 | 20130731
Length = 400
Score = 592 bits (1526), Expect = e-169, Method: Compositional matrix adjust.
Identities = 280/313 (89%), Positives = 302/313 (96%)
Query: 1 MEINLGKLGFDIDFHPSDNLVAAGLISGDFHIYRYSSDSNDNDPVRLLEVHAHTESCRAA 60
MEINLGKL FDIDFHPS+NLVA+GLI GD H+YRYSSD+ ++DPVR+LEVHAHTESCRAA
Sbjct: 62 MEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAA 121
Query: 61 RFINGGRVLLTGSPDCSILATDVETGSTITRIDNAHEAAINRLINLTESTVASGDDEGCI 120
RFINGGR +LTGSPD SILATDVETGSTI R+DNAHEAA+NRLINLTESTVASGDD+GCI
Sbjct: 122 RFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 181
Query: 121 KVWDIREQSCCNSFDVHEDYISDMTFASDAMKLLATSGDGTLSVCNLRRNKVQAQSEFSE 180
KVWD RE+SCCNSF+ HEDYISD+TFASDAMK+LATSGDGTLSVCNLRRNKVQAQSEFSE
Sbjct: 182 KVWDTRERSCCNSFEAHEDYISDITFASDAMKILATSGDGTLSVCNLRRNKVQAQSEFSE 241
Query: 181 DELLSVVLMKNGRKVVCGSQTGIILLYSWGCFKDCSDRFVDLSSNSLDTMVKLDEDRIIT 240
DELLSVVLMKNGRKVVCGSQTGI+LLYSWGCFKDCSDRFVDL+SNS+DTM+KLDEDRIIT
Sbjct: 242 DELLSVVLMKNGRKVVCGSQTGILLLYSWGCFKDCSDRFVDLASNSIDTMLKLDEDRIIT 301
Query: 241 GSENGMINLVGILPNRIIQPIAEHSEYPVERLAFSHDRKFLGSIAHDQLLKLWDLDNILQ 300
GSENGMINLVGILPNRII+PIAEHSEYPVERLAFSHDRKFLGSI HDQ+LKLWDLDNILQ
Sbjct: 302 GSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDNILQ 361
Query: 301 DSRSTQRNETGVI 313
SRSTQRNETGV+
Sbjct: 362 GSRSTQRNETGVV 374
>Medtr4g077783.1 | transducin/WD-40 repeat protein | HC |
chr4:29842283-29835238 | 20130731
Length = 505
Score = 591 bits (1524), Expect = e-169, Method: Compositional matrix adjust.
Identities = 280/311 (90%), Positives = 299/311 (96%)
Query: 1 MEINLGKLGFDIDFHPSDNLVAAGLISGDFHIYRYSSDSNDNDPVRLLEVHAHTESCRAA 60
MEINLGKL FDIDFHPSDNLVA GLI GD H+YRYSSD+ ++DPVRLLE+HAHTESCRAA
Sbjct: 1 MEINLGKLAFDIDFHPSDNLVATGLIDGDLHLYRYSSDNTNSDPVRLLEIHAHTESCRAA 60
Query: 61 RFINGGRVLLTGSPDCSILATDVETGSTITRIDNAHEAAINRLINLTESTVASGDDEGCI 120
RFINGGR LLTGSPD SILATDVETGSTI R+DNAHEAA+NRL+NLTESTVASGDD+GCI
Sbjct: 61 RFINGGRALLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLVNLTESTVASGDDDGCI 120
Query: 121 KVWDIREQSCCNSFDVHEDYISDMTFASDAMKLLATSGDGTLSVCNLRRNKVQAQSEFSE 180
KVWD RE+SCCNSF+ HEDYISD+TFASDAMKLLATSGDGTLSVCNLRRNKVQAQSEFSE
Sbjct: 121 KVWDTRERSCCNSFEAHEDYISDITFASDAMKLLATSGDGTLSVCNLRRNKVQAQSEFSE 180
Query: 181 DELLSVVLMKNGRKVVCGSQTGIILLYSWGCFKDCSDRFVDLSSNSLDTMVKLDEDRIIT 240
DELLSVVLMKNGRKVVCGSQTGI+LLYSWGCFKDCSDRFVDLSSNS+DTM+KLDEDRIIT
Sbjct: 181 DELLSVVLMKNGRKVVCGSQTGIMLLYSWGCFKDCSDRFVDLSSNSIDTMLKLDEDRIIT 240
Query: 241 GSENGMINLVGILPNRIIQPIAEHSEYPVERLAFSHDRKFLGSIAHDQLLKLWDLDNILQ 300
GSENGMINLVGILPNR+IQP+AEHSEYPVERLAFSHDRKFLGSIAHDQ+LKLWDLDNILQ
Sbjct: 241 GSENGMINLVGILPNRVIQPVAEHSEYPVERLAFSHDRKFLGSIAHDQMLKLWDLDNILQ 300
Query: 301 DSRSTQRNETG 311
SR+TQRNE G
Sbjct: 301 GSRNTQRNENG 311
>Medtr4g077783.2 | transducin/WD-40 repeat protein | HC |
chr4:29843059-29835238 | 20130731
Length = 483
Score = 534 bits (1375), Expect = e-152, Method: Compositional matrix adjust.
Identities = 253/279 (90%), Positives = 271/279 (97%)
Query: 33 YRYSSDSNDNDPVRLLEVHAHTESCRAARFINGGRVLLTGSPDCSILATDVETGSTITRI 92
YRYSSD+ ++DPVRLLE+HAHTESCRAARFINGGR LLTGSPD SILATDVETGSTI R+
Sbjct: 11 YRYSSDNTNSDPVRLLEIHAHTESCRAARFINGGRALLTGSPDFSILATDVETGSTIARL 70
Query: 93 DNAHEAAINRLINLTESTVASGDDEGCIKVWDIREQSCCNSFDVHEDYISDMTFASDAMK 152
DNAHEAA+NRL+NLTESTVASGDD+GCIKVWD RE+SCCNSF+ HEDYISD+TFASDAMK
Sbjct: 71 DNAHEAAVNRLVNLTESTVASGDDDGCIKVWDTRERSCCNSFEAHEDYISDITFASDAMK 130
Query: 153 LLATSGDGTLSVCNLRRNKVQAQSEFSEDELLSVVLMKNGRKVVCGSQTGIILLYSWGCF 212
LLATSGDGTLSVCNLRRNKVQAQSEFSEDELLSVVLMKNGRKVVCGSQTGI+LLYSWGCF
Sbjct: 131 LLATSGDGTLSVCNLRRNKVQAQSEFSEDELLSVVLMKNGRKVVCGSQTGIMLLYSWGCF 190
Query: 213 KDCSDRFVDLSSNSLDTMVKLDEDRIITGSENGMINLVGILPNRIIQPIAEHSEYPVERL 272
KDCSDRFVDLSSNS+DTM+KLDEDRIITGSENGMINLVGILPNR+IQP+AEHSEYPVERL
Sbjct: 191 KDCSDRFVDLSSNSIDTMLKLDEDRIITGSENGMINLVGILPNRVIQPVAEHSEYPVERL 250
Query: 273 AFSHDRKFLGSIAHDQLLKLWDLDNILQDSRSTQRNETG 311
AFSHDRKFLGSIAHDQ+LKLWDLDNILQ SR+TQRNE G
Sbjct: 251 AFSHDRKFLGSIAHDQMLKLWDLDNILQGSRNTQRNENG 289
>Medtr1g076780.1 | transducin/WD-40 repeat protein | HC |
chr1:34279139-34277007 | 20130731
Length = 157
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 132/156 (84%), Positives = 147/156 (94%)
Query: 1 MEINLGKLGFDIDFHPSDNLVAAGLISGDFHIYRYSSDSNDNDPVRLLEVHAHTESCRAA 60
MEINLGKL FDIDFHPS+NLVA+GLI GD H+YRYSSD+ ++DPVR+LEVHAHTESCRAA
Sbjct: 1 MEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAA 60
Query: 61 RFINGGRVLLTGSPDCSILATDVETGSTITRIDNAHEAAINRLINLTESTVASGDDEGCI 120
RFINGGR +LTGSPD SILATDVETGSTI R+DNAHEAA+NRLINLTESTVASGDD+GCI
Sbjct: 61 RFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 120
Query: 121 KVWDIREQSCCNSFDVHEDYISDMTFASDAMKLLAT 156
KVWD RE+SCCNSF+ HEDYISD+TFASDAMK+LAT
Sbjct: 121 KVWDTRERSCCNSFEAHEDYISDITFASDAMKILAT 156
>Medtr4g119620.1 | transducin/WD40 repeat protein | HC |
chr4:49575751-49578750 | 20130731
Length = 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 124/297 (41%), Gaps = 23/297 (7%)
Query: 12 IDFHPSDNLVAAGLISGDFHIYRYS-SDSNDND----PVRLLEVHAHTESCRAARFINGG 66
+ F + L+A+ Y ++ SDS+ N P++ E H H S A F +
Sbjct: 33 VKFSSNGRLLASSSADKTLRTYGFTNSDSDSNSLTLSPMQQYEGHQHGVSDLA--FSSDS 90
Query: 67 RVLLTGSPDCSILATDVETGSTITRIDNAHEAAINRLINLTESTVASGDDEGCIKVWDIR 126
R L++ S D +I DV TGS + + N + + SG + ++VWD++
Sbjct: 91 RYLVSASDDKTIRLWDVPTGSLVKTLHGHTNYVFCVNFNPQSNVIVSGSFDETVRVWDVK 150
Query: 127 EQSCCNSFDVHEDYISDMTFASDAMKLLATSGDGTLSVCNLRRNKVQAQSEFSEDELLSV 186
C H D ++ + F D ++++S DG + + E+ +S
Sbjct: 151 SGKCLKVLPAHSDPVTAVDFNRDGTLIVSSSYDGLCRIWDASTGHCIKTLIDDENPPVSY 210
Query: 187 V-LMKNGRKVVCGSQTGIILL--YSWGCFKDCSDRFVDLSSNSLDTMVKLDEDRIITGSE 243
V N + ++ G+ + L YS G F V+ + + ++ GSE
Sbjct: 211 VKFSPNAKFILVGTLDNNLRLWNYSTGKFLKTYTGHVNSKYCISSSFSITNGKYVVGGSE 270
Query: 244 NGMINLVGILPNRIIQPIAEHSE-------YPVERLAFSHDRKFLGSIAHDQLLKLW 293
+ I L G+ +I+Q + H++ +P E + S G++ +D+ +K+W
Sbjct: 271 DNCIYLWGLQSRKIVQKLEGHTDSVVSVSCHPTENMIAS------GALGNDKTVKIW 321
>Medtr7g086360.1 | U5 small nuclear ribonucleoprotein 40 kDa-like
protein | HC | chr7:33509053-33512350 | 20130731
Length = 345
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 125/293 (42%), Gaps = 19/293 (6%)
Query: 10 FDIDFHPSDNLVAAGLISGDFHIYRYSSDSNDNDPVRLLEVHAHTESCRAARFINGGRVL 69
+ + F+P+ ++VA+G + ++ D + + + H + + + G +
Sbjct: 59 YTMKFNPTGSVVASGSHDKEIFLWNVHGDCKN-----FMVLKGHKNAVLDLHWTSDGTQI 113
Query: 70 LTGSPDCSILATDVETGSTITRIDNAHEAAINRLINLTEST--VASGDDEGCIKVWDIRE 127
++ SPD ++ D ETG I ++ H + +N V SG D+G K+WD+R+
Sbjct: 114 ISASPDKTLRLWDTETGKQIKKMVE-HLSYVNSCCPTRRGPPLVVSGSDDGTAKLWDMRQ 172
Query: 128 QSCCNSF-DVHEDYISDMTFASDAMKLLATSGDGTLSVCNLRRNKVQAQSEFSEDELLSV 186
+ +F D ++ I+ ++F+ + K+ D + + +LR+ +V + +D + S+
Sbjct: 173 RGSIQTFPDKYQ--ITAVSFSDASDKIYTGGIDNDVKIWDLRKGEVTMTLQGHQDMITSM 230
Query: 187 VLMKNGRKVVCGSQTGIILLYSW-------GCFKDCSDRFVDLSSNSLDTMVKLDEDRII 239
L +G ++ + ++ C K + N L D ++
Sbjct: 231 QLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVT 290
Query: 240 TGSENGMINLVGILPNRIIQPIAEHSEYPVERLAFSHDRKFLGSIAHDQLLKL 292
GS + M+ + RI+ + H+ V F + +GS + D+ + L
Sbjct: 291 AGSSDRMVYIWDTTSRRILYKLPGHNGS-VNECVFHPNEPIVGSCSSDKQIYL 342
>Medtr4g011950.1 | coatomer subunit beta-like protein | HC |
chr4:3146350-3132249 | 20130731
Length = 931
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Query: 12 IDFHPSDNLVAAGLISGDFHIYRYSSDSNDNDPVRLLEVHAHTE-SCRAARFINGGRVLL 70
+D HP++ + A L SG I+ Y S + + EV TE R+A+FI + ++
Sbjct: 21 VDLHPTEPWILASLYSGTVCIWNYQSQTM----AKSFEV---TELPVRSAKFIARKQWVV 73
Query: 71 TGSPDCSILATDVETGSTITRIDNAHEAAINRL-INLTESTVASGDDEGCIKVWDIREQS 129
G+ D I + T + ++ AH I + ++ T V S D+ IK+WD +
Sbjct: 74 AGADDMFIRVYNYNTMDKV-KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 132
Query: 130 CCNS-FDVHEDYISDMTF-ASDAMKLLATSGDGTLSVCNL 167
C F+ H Y+ +TF D + S D T+ + NL
Sbjct: 133 ICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 94 NAHEAAINRLINLT---ESTVASGDDEGCIKVWDIREQSCCNSFDVHEDYISDMTFASDA 150
+AH+ +N + T + + +G D+ KVWD + +SC + D H +S + F +
Sbjct: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPEL 241
Query: 151 MKLLATSGDGTLSVCNLRRNKVQAQSEFSEDELLSVVLMKNGRKVVCGSQTGIILL 206
++ S DGT+ + + +++ + + + ++ MK R+VV G G I++
Sbjct: 242 PIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMKGSRRVVIGYDEGTIMV 297
>Medtr2g102277.4 | coatomer subunit beta-like protein | HC |
chr2:44045802-44056312 | 20130731
Length = 917
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Query: 12 IDFHPSDNLVAAGLISGDFHIYRYSSDSNDNDPVRLLEVHAHTE-SCRAARFINGGRVLL 70
+D HP++ + A L SG I+ Y S + + EV TE R+A+F+ + ++
Sbjct: 21 VDLHPTEPWILASLYSGTVCIWNYQSQTM----AKSFEV---TELPVRSAKFVARKQWVV 73
Query: 71 TGSPDCSILATDVETGSTITRIDNAHEAAINRL-INLTESTVASGDDEGCIKVWDIREQS 129
G+ D I + T + ++ AH I + ++ T V S D+ IK+WD +
Sbjct: 74 AGADDMFIRVYNYNTMDKV-KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 132
Query: 130 CCNS-FDVHEDYISDMTF-ASDAMKLLATSGDGTLSVCNL 167
C F+ H Y+ +TF D + S D T+ + NL
Sbjct: 133 ICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
>Medtr2g102277.1 | coatomer subunit beta-like protein | HC |
chr2:44045802-44056791 | 20130731
Length = 917
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Query: 12 IDFHPSDNLVAAGLISGDFHIYRYSSDSNDNDPVRLLEVHAHTE-SCRAARFINGGRVLL 70
+D HP++ + A L SG I+ Y S + + EV TE R+A+F+ + ++
Sbjct: 21 VDLHPTEPWILASLYSGTVCIWNYQSQTM----AKSFEV---TELPVRSAKFVARKQWVV 73
Query: 71 TGSPDCSILATDVETGSTITRIDNAHEAAINRL-INLTESTVASGDDEGCIKVWDIREQS 129
G+ D I + T + ++ AH I + ++ T V S D+ IK+WD +
Sbjct: 74 AGADDMFIRVYNYNTMDKV-KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 132
Query: 130 CCNS-FDVHEDYISDMTF-ASDAMKLLATSGDGTLSVCNL 167
C F+ H Y+ +TF D + S D T+ + NL
Sbjct: 133 ICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
>Medtr2g102277.2 | coatomer subunit beta-like protein | HC |
chr2:44045802-44056791 | 20130731
Length = 921
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Query: 12 IDFHPSDNLVAAGLISGDFHIYRYSSDSNDNDPVRLLEVHAHTE-SCRAARFINGGRVLL 70
+D HP++ + A L SG I+ Y S + + EV TE R+A+F+ + ++
Sbjct: 21 VDLHPTEPWILASLYSGTVCIWNYQSQTM----AKSFEV---TELPVRSAKFVARKQWVV 73
Query: 71 TGSPDCSILATDVETGSTITRIDNAHEAAINRL-INLTESTVASGDDEGCIKVWDIREQS 129
G+ D I + T + ++ AH I + ++ T V S D+ IK+WD +
Sbjct: 74 AGADDMFIRVYNYNTMDKV-KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 132
Query: 130 CCNS-FDVHEDYISDMTF-ASDAMKLLATSGDGTLSVCNL 167
C F+ H Y+ +TF D + S D T+ + NL
Sbjct: 133 ICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
>Medtr2g102277.3 | coatomer subunit beta-like protein | HC |
chr2:44045802-44056785 | 20130731
Length = 921
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Query: 12 IDFHPSDNLVAAGLISGDFHIYRYSSDSNDNDPVRLLEVHAHTE-SCRAARFINGGRVLL 70
+D HP++ + A L SG I+ Y S + + EV TE R+A+F+ + ++
Sbjct: 21 VDLHPTEPWILASLYSGTVCIWNYQSQTM----AKSFEV---TELPVRSAKFVARKQWVV 73
Query: 71 TGSPDCSILATDVETGSTITRIDNAHEAAINRL-INLTESTVASGDDEGCIKVWDIREQS 129
G+ D I + T + ++ AH I + ++ T V S D+ IK+WD +
Sbjct: 74 AGADDMFIRVYNYNTMDKV-KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 132
Query: 130 CCNS-FDVHEDYISDMTF-ASDAMKLLATSGDGTLSVCNL 167
C F+ H Y+ +TF D + S D T+ + NL
Sbjct: 133 ICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
>Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr6:91770-77124 | 20130731
Length = 760
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 12/208 (5%)
Query: 12 IDFHPSDNLVAAGLISGDFHIYRYSSDSNDNDPVRLLEVHAHTESCRAARFINGGRVLLT 71
++F S+ LVAAG SG ++ D + VR L H +C + F G +
Sbjct: 65 VNFDSSEVLVAAGAASGTIKLW----DLEEAKIVRTLT--GHRSNCTSVDFHPFGEFFAS 118
Query: 72 GSPDCSILATDVETGSTITRIDNAHEAAINRLINLTE--STVASGDDEGCIKVWDIREQS 129
GS D ++ D+ I H +N I T V SG ++ +K+WD+
Sbjct: 119 GSLDTNLKIWDIRKKGCI-HTYKGHTRGVN-AIRFTPDGRWVVSGGEDNTVKLWDLTAGK 176
Query: 130 CCNSFDVHEDYISDMTFASDAMKLLATSGDGTLSVCNLRRNKVQAQSEFSEDELLSVVLM 189
+ F HE I + F L S D T+ +L ++ + + S+
Sbjct: 177 LLHDFKSHEGQIQCIDFHPSEFLLATGSADRTVKFWDLETFELIGSAGPETTGVRSLTFS 236
Query: 190 KNGRKVVCGSQTGIILLYSWGCFKDCSD 217
+GR ++CG + ++SW + C D
Sbjct: 237 PDGRTLLCGLHES-LKVFSWEPIR-CHD 262
>Medtr2g016690.1 | transducin/WD-like repeat-protein | HC |
chr2:5155282-5150008 | 20130731
Length = 331
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 13/188 (6%)
Query: 12 IDFHPSDNLVAAGLISGDFHIYRYSSDSNDNDPVRLLEVHAHTESCRAARFINGGRVLLT 71
++ P +AA +G+ HI + D N N P ++ HT + A F G + +
Sbjct: 56 LEITPDKRYLAA---AGNPHIRLF--DVNSNSPQPVMSYDGHTSNVMAVGFQCDGNWMYS 110
Query: 72 GSPDCSILATDVETGSTITRIDNAHEAAINRLI-NLTESTVASGDDEGCIKVWDIREQSC 130
GS D ++ D+ ++ AA+N ++ + ++ + SGD G I+VWD+ SC
Sbjct: 111 GSEDGTVKIWDLRAPGCQREYES--RAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSC 168
Query: 131 -CNSFDVHEDYISDMTFASDAMKLLATSGDGTLSVCNLRRNKVQAQSEFSEDELLSVVLM 189
C + + +T D ++A + +GT V L R Q + F E L +
Sbjct: 169 SCELVPEVDTAVRSLTVMWDGSLVVAANNNGTCYVWRLLRG-TQTMTNF---EPLHKLQA 224
Query: 190 KNGRKVVC 197
NG + C
Sbjct: 225 HNGYILKC 232
>Medtr7g114370.1 | transducin/WD40 repeat protein | HC |
chr7:47215859-47206309 | 20130731
Length = 771
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%)
Query: 48 LEVHAHTESCRAARFINGGRVLLTGSPDCSILATDVETGSTITRIDNAHEAAINRLINLT 107
+ H ES A GG +L++G + + D +GS I ++ + L++ T
Sbjct: 217 IAAKGHKESVYALAMDEGGSILVSGGTEKVVRVWDTRSGSKILKLKGHTDNIRALLLDST 276
Query: 108 ESTVASGDDEGCIKVWDIREQSCCNSFDVHEDYI 141
SG + I++WDI +Q C +S+ VH D +
Sbjct: 277 GRYCLSGSSDSMIRLWDIGQQRCVHSYAVHTDSV 310