Miyakogusa Predicted Gene

Lj1g3v2096250.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2096250.2 Non Characterized Hit- tr|K3ZQ41|K3ZQ41_SETIT
Uncharacterized protein OS=Setaria italica GN=Si028720,32.24,6e-18,ARM
repeat,Armadillo-type fold; seg,NULL; no description,Armadillo-like
helical; DUF3453,Protein of ,CUFF.28634.2
         (273 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g111090.1 | symplekin tight junction protein carboxy-termi...   382   e-106
Medtr4g015850.1 | symplekin tight junction protein carboxy-termi...   125   4e-29

>Medtr3g111090.1 | symplekin tight junction protein carboxy-terminal
           protein | HC | chr3:51920629-51901963 | 20130731
          Length = 1338

 Score =  382 bits (980), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 185/244 (75%), Positives = 209/244 (85%)

Query: 1   MAAPPPTKDQVLSLLAAANNHGDLSVKTSSLKQAKXXXXXXXXXXXXXXYPYLLELQSSP 60
           MAAPPPTKDQVLSLLAAANNHGD+SVKT+SLKQAK              +PYLLELQSS 
Sbjct: 1   MAAPPPTKDQVLSLLAAANNHGDISVKTTSLKQAKDLLLSIDPSLAADLFPYLLELQSSH 60

Query: 61  ESLVRKLLIQIIEEIGFKAAEDSPKLISVLLTFLRDSDVEVVKQSIVSGSNIFCSGFEEL 120
           + LVRKLLIQIIEEIGF+A + SP LIS LLTFLRD+D  VVKQSI+SG+NIFC+ FEEL
Sbjct: 61  QPLVRKLLIQIIEEIGFRAVQHSPTLISSLLTFLRDTDATVVKQSIISGTNIFCACFEEL 120

Query: 121 VVQFQQCGKVERWLEEIWMWMHRFKDAVFGIALEPGAVGIKLLALKFLETFILLFTSDNS 180
           ++QFQQCGKVERWLEEIWMWM +FK+AVF IALE G+VGIKLLALKFLE F+LLFTSD S
Sbjct: 121 ILQFQQCGKVERWLEEIWMWMFKFKEAVFEIALEGGSVGIKLLALKFLEIFVLLFTSDIS 180

Query: 181 NPDKPATEGVRKAVNISWLVGGHPVLDPVVLMSEANRTLGTLLNLLQSAGSLPGCLTITV 240
           + +K ATEGVR+AVNISWLVG HPVLDP+VLM+EANRT+G LL LLQ AG+ PGCLTITV
Sbjct: 181 DSEKSATEGVRQAVNISWLVGSHPVLDPMVLMTEANRTIGILLKLLQCAGNTPGCLTITV 240

Query: 241 VNCV 244
           VNC+
Sbjct: 241 VNCL 244


>Medtr4g015850.1 | symplekin tight junction protein carboxy-terminal
           protein | HC | chr4:4819906-4805018 | 20130731
          Length = 1338

 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 120/222 (54%), Gaps = 1/222 (0%)

Query: 7   TKDQVLSLLAAANNHGDLSVKTSSLKQAKXXXXXXXXXXXXXXYPYLLELQSSPESLVRK 66
           +++++ SL+ +A    D+  K  SL++ K               P + +  S   S VRK
Sbjct: 10  SREKLASLVHSAKLASDIPSKIESLRRLKIELPQEDPVLLTEFLPPIFDFLSDQFSPVRK 69

Query: 67  LLIQIIEEIGFKAAEDSPKLISVLLTFLRDSDVEVVKQSIVSGSNIFCSGFEELVVQFQQ 126
            + ++I EIG K  E  P ++ VL+  L D    VV+Q+I+ G  +F S  E++ +Q   
Sbjct: 70  FVTEMIGEIGLKNTEFLPDIVPVLIDVLDDDTPAVVRQAILCGIRLFRSTLEKIAIQGLF 129

Query: 127 CGKVERWLEEIWMWMHRFKDAVFGIALEPGAVGIKLLALKFLETFILLFTSDNSNPDKP- 185
              ++  +E  W WM +FKD V+ IA + G  G KLLALKF+E  I L+T D +   +P 
Sbjct: 130 SSDLDSAVESAWEWMVKFKDKVYSIAFQNGRGGAKLLALKFVEAVIRLYTLDPNGSAEPN 189

Query: 186 ATEGVRKAVNISWLVGGHPVLDPVVLMSEANRTLGTLLNLLQ 227
           + +G R   NISWL   HPVL+   +  EA+ +LG LL+ L+
Sbjct: 190 SHQGKRPVFNISWLRRDHPVLNIGDMSMEASNSLGLLLDQLR 231