Miyakogusa Predicted Gene

Lj1g3v2096250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2096250.1 Non Characterized Hit- tr|B9R6Q7|B9R6Q7_RICCO
Putative uncharacterized protein OS=Ricinus communis G,62.88,0,ARM
repeat,Armadillo-type fold; seg,NULL; no description,Armadillo-like
helical; Symplekin_C,Symplek,CUFF.28634.1
         (1339 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g111090.1 | symplekin tight junction protein carboxy-termi...  1984   0.0  
Medtr4g015850.1 | symplekin tight junction protein carboxy-termi...   575   e-163

>Medtr3g111090.1 | symplekin tight junction protein carboxy-terminal
            protein | HC | chr3:51920629-51901963 | 20130731
          Length = 1338

 Score = 1984 bits (5141), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1001/1342 (74%), Positives = 1085/1342 (80%), Gaps = 7/1342 (0%)

Query: 1    MAAPPPTKDQVLSLLAAANNHGDLSVKTSSLKQAKXXXXXXXXXXXXXXYPYLLELQSSP 60
            MAAPPPTKDQVLSLLAAANNHGD+SVKT+SLKQAK              +PYLLELQSS 
Sbjct: 1    MAAPPPTKDQVLSLLAAANNHGDISVKTTSLKQAKDLLLSIDPSLAADLFPYLLELQSSH 60

Query: 61   ESLVRKLLIQIIEEIGFKAAEDSPKLISVLLTFLRDSDVEVVKQSIVSGSNIFCSGFEEL 120
            + LVRKLLIQIIEEIGF+A + SP LIS LLTFLRD+D  VVKQSI+SG+NIFC+ FEEL
Sbjct: 61   QPLVRKLLIQIIEEIGFRAVQHSPTLISSLLTFLRDTDATVVKQSIISGTNIFCACFEEL 120

Query: 121  VVQFQQCGKVERWLEEIWMWMHRFKDAVFGIALEPGAVGIKLLALKFLETFILLFTSDNS 180
            ++QFQQCGKVERWLEEIWMWM +FK+AVF IALE G+VGIKLLALKFLE F+LLFTSD S
Sbjct: 121  ILQFQQCGKVERWLEEIWMWMFKFKEAVFEIALEGGSVGIKLLALKFLEIFVLLFTSDIS 180

Query: 181  NPDKPATEGVRKAVNISWLVGGHPVLDPVVLMSEANRTLGTLLNLLQSAGSLPGCLTITV 240
            + +K ATEGVR+AVNISWLVG HPVLDP+VLM+EANRT+G LL LLQ AG+ PGCLTITV
Sbjct: 181  DSEKSATEGVRQAVNISWLVGSHPVLDPMVLMTEANRTIGILLKLLQCAGNTPGCLTITV 240

Query: 241  VNCLAAIARKRPQHYDTILSAMLDFNPNFQTVKGCHVASIQYSLRTTFLGFLRCTYSPXX 300
            VNCLAAIARKR QHYDTILSA+LDF+PN QTVKGCHV SIQYSLRT FLGFLRCTYSP  
Sbjct: 241  VNCLAAIARKRSQHYDTILSALLDFDPNVQTVKGCHVPSIQYSLRTAFLGFLRCTYSPII 300

Query: 301  XXXXXXXXXXXGMNAGDAADQVIRQVDKMIKNGDRSTRDARASKDEVPSTQSPVSGELSR 360
                        MNAGDAADQVIRQVDKMIK+ DR  RDAR +KD+ PS Q PVSGE SR
Sbjct: 301  ESRERLIRSLRAMNAGDAADQVIRQVDKMIKSADRFIRDARVNKDDQPSNQLPVSGESSR 360

Query: 361  KRPVPQDNEQLANGHEAISKRIRSGPDPYLTLSAQINESGKDLXXXXXXXXXXXXLDSDL 420
            KRPVP DNEQLANGHEAI+KRIRSGPD   TL AQ+N+SG+D             L+S+L
Sbjct: 361  KRPVPHDNEQLANGHEAIAKRIRSGPDSDFTLPAQVNDSGRDHSSVNGVSPNVPVLESEL 420

Query: 421  NAVEQMIAVIGALLAEGERGAESLEILISNIHPDLLADIVITNMKHLPKTPPPLARLGNX 480
             AVEQMIAVIGAL+AEGERGA+SLEILIS IHPDLLADIVI NMKHLPK PPPLARL + 
Sbjct: 421  TAVEQMIAVIGALIAEGERGAKSLEILISQIHPDLLADIVIANMKHLPKAPPPLARLESP 480

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXLAVTDQXXXXXXXXXXXXXXXX--XXXXXXNQP 538
                                       L V+ Q                        N P
Sbjct: 481  SVTRPVGSLVSQSHVITTSASMSSVQSLTVSAQAQVSSTTAISAATTSSPSDTSNFSNLP 540

Query: 539  ADSKXXXXXXXXXXXXXXGAISPGGVAASTTDDTGATKLEVDDPVSSNTPVSHPVASTND 598
            ADSK              GAI+PGG A S TDDT AT LE +DPVS   P SH VAST+D
Sbjct: 541  ADSKRDPRRDPRRLDPRRGAITPGGAAVSVTDDTAATHLESEDPVSFIKPASHHVASTDD 600

Query: 599  NTPSDLTMKIKNDDMVSEGPPVSAPDGITPKTEVVERPGEVHQNMEENAFLDPSIPLSDL 658
            +  S+LT+KI+NDDM+SEGPPV  PD ++PKTE +E PG+ HQ ME NA +DP +  +D 
Sbjct: 601  DIQSNLTIKIENDDMISEGPPVPGPDRVSPKTETLEGPGD-HQIMEANASMDPEVYSTDS 659

Query: 659  RDEDISTEKLSDDTGTNGPDSPSMLEFDEFSPDVQVASTSEDTCLELPQLPPYVQQSKEQ 718
            +DE++ST  L DD  TNG DS S+LEFD+FS DVQV+ TSEDTCLELPQLPPY+Q S+EQ
Sbjct: 660  KDENLSTANLLDDNETNGIDSSSILEFDQFSVDVQVSPTSEDTCLELPQLPPYIQLSQEQ 719

Query: 719  ESKVKHMAIMHIIESYKHLHGTDCQQFCMPLLARLVAQIDDDNEIIVMLQKHILEDQWQK 778
            ESKVKHMAI HIIESY HL G DCQQFCMPLLARLVAQID+DN II MLQKHILED W+K
Sbjct: 720  ESKVKHMAISHIIESYNHLQGADCQQFCMPLLARLVAQIDNDNVIITMLQKHILEDHWRK 779

Query: 779  GXXXXXXXXXXXXXXXXXDSDGKSSSSAVLYENFLLGVAKALLEYFPASDKSFSRLLGEA 838
            G                 DS G +SSSAVLY+NFLLGVAK +L+ FPASDKSFS+LLGE 
Sbjct: 780  GHELVLHVLYHLHSLMILDSAGNTSSSAVLYDNFLLGVAKTVLDSFPASDKSFSKLLGEV 839

Query: 839  PFLPESTLKILNDLCYSDVIDHDGRISRDIERVTQGLGAIWGLILGRPQNRQACLEIALK 898
            PFLPES LKIL+DLCYSDV+DHDG+I RDIERVTQGLGAIW LILGRPQNRQ CL IALK
Sbjct: 840  PFLPESALKILDDLCYSDVVDHDGKIIRDIERVTQGLGAIWSLILGRPQNRQGCLGIALK 899

Query: 899  CAVHPQDEIRAKAIRLVTNKLFQLSYISEDVEKFATKMLLSAVDREVLDAVQSRPAEPRA 958
            CAVHPQDEIRAKAIRLVTNKLFQLSYI+EDVEKFATKMLLSAVD EV +A QS P E R 
Sbjct: 900  CAVHPQDEIRAKAIRLVTNKLFQLSYIAEDVEKFATKMLLSAVDHEVSNAAQSGPTEQRT 959

Query: 959  EAQVESHEVSSTSQVSEPTISENDSARVAKPMIQSPSISFS-EAQRFISLFFALCTKKPI 1017
            EAQVES E+S TSQV EP   +ND A VAKP  QS S     EAQR ISLFFALCTKKP 
Sbjct: 960  EAQVESLEISGTSQVKEP---KNDPAGVAKPSSQSVSSISFSEAQRLISLFFALCTKKPS 1016

Query: 1018 LLQIVFDVYGKAPRTVKQAFHRHIPILVRALGQSYSELLPIISDPPEGSENLLTLVLQIL 1077
            LLQIVFDVYG+A RTVKQAFHRHIP LVRALGQSYSELL IISDPP+GSENLLTLVLQIL
Sbjct: 1017 LLQIVFDVYGQASRTVKQAFHRHIPNLVRALGQSYSELLHIISDPPKGSENLLTLVLQIL 1076

Query: 1078 TQDTTPSSDLISTVKHLYETKFKDVTILVPLLSSLSKKEVLPIFPRLVDLPLEKFQRALA 1137
            TQDTTPSSDLISTVKHLYETKF+DVTILVPLLSSLSK EVLPIFPRLVDLPLEKFQRALA
Sbjct: 1077 TQDTTPSSDLISTVKHLYETKFRDVTILVPLLSSLSKTEVLPIFPRLVDLPLEKFQRALA 1136

Query: 1138 HILQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKAL 1197
            HILQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKAL
Sbjct: 1137 HILQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKAL 1196

Query: 1198 NQMVDQTPLPLLFMRTVIQSIDAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQT 1257
            NQMVDQTPLPLLFMRT+IQ++DAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQT
Sbjct: 1197 NQMVDQTPLPLLFMRTIIQAVDAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQT 1256

Query: 1258 QPRSFHVLLQLPPQQLESALNKHANLRAPLASYASQPTVKSSLTRSTLAVLGLANETHVQ 1317
            QPRSFHVLLQLPPQQLESALNKHANLR PLASYA+QPTVKSSL+RSTL VLGLANETHVQ
Sbjct: 1257 QPRSFHVLLQLPPQQLESALNKHANLRGPLASYANQPTVKSSLSRSTLVVLGLANETHVQ 1316

Query: 1318 QHLSTSLHPSEASSSVSGATLT 1339
            QHL TSLH SE S+SVSGATLT
Sbjct: 1317 QHLPTSLHHSETSTSVSGATLT 1338


>Medtr4g015850.1 | symplekin tight junction protein carboxy-terminal
            protein | HC | chr4:4819906-4805018 | 20130731
          Length = 1338

 Score =  575 bits (1481), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 335/710 (47%), Positives = 453/710 (63%), Gaps = 25/710 (3%)

Query: 651  PSIPLSDLRDEDISTEK---LSDDTGTNGPDSPSMLEFDEFSP-----DVQVASTSEDTC 702
            PS+  +D++ ED S E+   L + + +N   S S  + +E SP     DV    +S  T 
Sbjct: 623  PSLASTDMQIEDASQEQATSLDNRSPSNLVPSMSADKSEELSPKAVAPDVNSLVSSTATS 682

Query: 703  LELPQ-------LPPYVQQSKEQESKVKHMAIMHIIESYKHLHGTDCQQFCMPLLARLVA 755
              LP        + P V  + EQ   ++    M II++YK +      +    +LA L  
Sbjct: 683  AVLPSRLVLPKMIAPVVDLADEQRDHLQTSCFMRIIDAYKQISVAGGSKVRFSILAYLGV 742

Query: 756  QIDDDNEIIVMLQKHILED-QWQKGXXXXXXXXXXXXXXXXXDSDGKSSSSAV-LYENFL 813
            +   + +   +LQKHIL D    +G                 + D  SS++A  +YE FL
Sbjct: 743  EFPLELDPWKLLQKHILIDYSGHEGHELTLRVLYRLFGEAEVEPDFFSSTTAASVYETFL 802

Query: 814  LGVAKALLEYFPASDKSFSRLLGEAPFLPESTLKILNDLCY---SDVIDHDGRISRDIER 870
            L VA+AL + FP SDKS S+LLGE+P+LP+S LKIL ++C     D I+ +   + +++R
Sbjct: 803  LTVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKILENMCSPGNGDKIEKESH-TLNVDR 861

Query: 871  VTQGLGAIWGLILGRPQNRQACLEIALKCAVHPQDEIRAKAIRLVTNKLFQLSYISEDVE 930
            VTQGL A+W LIL RP  R+ CL+IAL+ AVH  +E+R KAIRLV NKL+ LS IS+++E
Sbjct: 862  VTQGLSAVWSLILLRPPIRETCLKIALQSAVHHVEEVRMKAIRLVANKLYPLSSISKEIE 921

Query: 931  KFATKMLLSAVDREVLDAV-QSRPAEPRAEAQVESHEVSSTSQVSEPTISENDSARVAKP 989
             FA +M+ S +  +  +A  +   A+ +    VE   ++    +S  T   +D+ + +  
Sbjct: 922  DFAKEMVFSVMSSDASEATDEGSVADSQKGPDVE-KVINEPLSLSGSTKDVSDNRQSSTS 980

Query: 990  MIQSPSISFSEAQRFISLFFALCTKKPILLQIVFDVYGKAPRTVKQAFHRHIPILVRALG 1049
               SP +S SEAQR +SLFFALCTKK  L + +F +Y    +  KQA HR IPILVR LG
Sbjct: 981  EGTSP-LSVSEAQRGMSLFFALCTKKHSLFREIFVIYRSTSKAAKQAIHRQIPILVRTLG 1039

Query: 1050 QSYSELLPIISDPPEGSENLLTLVLQILTQDTTPSSDLISTVKHLYETKFKDVTILVPLL 1109
             S S+LL IISDPP GSENLL  VL  LT  T PS DLI  VK L+++K KD  IL+P+L
Sbjct: 1040 SS-SDLLEIISDPPNGSENLLMQVLHTLTDGTIPSKDLIVAVKRLHDSKLKDAEILIPIL 1098

Query: 1110 SSLSKKEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPALTPVEVLVAIHGIVPEKDGL 1169
              L K EV+ +FP +V+LP EKFQ AL  ILQGS+ +GP LTP EVL+AIHGI PE+DG+
Sbjct: 1099 PFLLKDEVMAVFPNIVNLPPEKFQGALGRILQGSSQSGPVLTPAEVLIAIHGIDPERDGI 1158

Query: 1170 ALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQSIDAFPALVDFVM 1229
             LKK+TDAC+ACFEQR  FTQ+VLAK LNQ+V+Q PLPLLFMRTV+Q+I AFP LVDF+M
Sbjct: 1159 PLKKVTDACNACFEQRQTFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVDFIM 1218

Query: 1230 EILSKLVTKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPQQLESALNKHANLRAPLAS 1289
             IL++LV KQVW+ PKLWVGFLKC+  T+P+SF VLLQLPP QLE+ALN+ A L+APL +
Sbjct: 1219 GILARLVKKQVWKYPKLWVGFLKCLQLTKPQSFGVLLQLPPPQLEAALNRIAALKAPLIA 1278

Query: 1290 YASQPTVKSSLTRSTLAVLGLANETHVQQHLSTSLHPSEASSSVSGATLT 1339
            +ASQP ++SSL RS L VLG+ +++ V     TS   +  +S+    T+T
Sbjct: 1279 HASQPDIQSSLPRSVLVVLGIVSDSQVPSQPQTSQTQTGETSNSDKDTMT 1328



 Score =  221 bits (562), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 153/474 (32%), Positives = 236/474 (49%), Gaps = 8/474 (1%)

Query: 7   TKDQVLSLLAAANNHGDLSVKTSSLKQAKXXXXXXXXXXXXXXYPYLLELQSSPESLVRK 66
           +++++ SL+ +A    D+  K  SL++ K               P + +  S   S VRK
Sbjct: 10  SREKLASLVHSAKLASDIPSKIESLRRLKIELPQEDPVLLTEFLPPIFDFLSDQFSPVRK 69

Query: 67  LLIQIIEEIGFKAAEDSPKLISVLLTFLRDSDVEVVKQSIVSGSNIFCSGFEELVVQFQQ 126
            + ++I EIG K  E  P ++ VL+  L D    VV+Q+I+ G  +F S  E++ +Q   
Sbjct: 70  FVTEMIGEIGLKNTEFLPDIVPVLIDVLDDDTPAVVRQAILCGIRLFRSTLEKIAIQGLF 129

Query: 127 CGKVERWLEEIWMWMHRFKDAVFGIALEPGAVGIKLLALKFLETFILLFTSD-NSNPDKP 185
              ++  +E  W WM +FKD V+ IA + G  G KLLALKF+E  I L+T D N + +  
Sbjct: 130 SSDLDSAVESAWEWMVKFKDKVYSIAFQNGRGGAKLLALKFVEAVIRLYTLDPNGSAEPN 189

Query: 186 ATEGVRKAVNISWLVGGHPVLDPVVLMSEANRTLGTLLNLLQ--SAGSLPGCLTITVVNC 243
           + +G R   NISWL   HPVL+   +  EA+ +LG LL+ L+  +  SL   + I ++  
Sbjct: 190 SHQGKRPVFNISWLRRDHPVLNIGDMSMEASNSLGLLLDQLRFPTVKSLGNSVIIVLIKS 249

Query: 244 LAAIARKRPQHYDTILSAMLDFNPNFQTVKGCHVASIQYSLRTTFLGFLRCTYSPXXXXX 303
           L+AIA +RP  Y  IL  +L   P+   V G  V++   +L+  FL    CT+       
Sbjct: 250 LSAIAIERPAFYGRILPVLLSLEPSTSVVNGVCVSAAHLALKKAFLTCTECTHPSAAPWR 309

Query: 304 XXXXXXXXGMNAGDAADQVIRQVDKMIKNGDRSTRDARAS--KDEVPSTQSPVSG--ELS 359
                    M +   ADQV   +    ++  +   D +    K+E  +  S  SG   L 
Sbjct: 310 DRLAGALKEMQSEGKADQVFHPISASNESILQREEDYQPVIIKEEDTAGSSFDSGHVNLG 369

Query: 360 RKRPVPQDNEQLANGHEAISKRIRSGPDPYLTLSAQINESGKDLXXXX-XXXXXXXXLDS 418
           RKR   Q+   LA   +   KR+R+  D   T   +++E   +               D 
Sbjct: 370 RKRSGSQNGSDLAEDADVPGKRVRTTTDGLKTPKMELDECTANTQNDTPSTVPAFSKGDV 429

Query: 419 DLNAVEQMIAVIGALLAEGERGAESLEILISNIHPDLLADIVITNMKHLPKTPP 472
           D   V+Q++A+ GAL+A+GE    SLEILISNI  DLLA++V+ NM++LP   P
Sbjct: 430 DNGPVQQLVAMFGALVAQGEMAVASLEILISNISADLLAEVVMANMRYLPPNCP 483