Miyakogusa Predicted Gene

Lj1g3v2095870.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2095870.1 Non Characterized Hit- tr|I3SNI8|I3SNI8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,52.94,0.000000000000009,Cysteine proteinases,NULL; Cathepsin
propeptide inhibitor domain (,Proteinase inhibitor I29,
catheps,CUFF.28498.1
         (261 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g086240.1 | cathepsin propeptide inhibitor domain protein ...    54   2e-07
Medtr3g112430.1 | papain family cysteine protease | HC | chr3:52...    50   3e-06

>Medtr7g086240.1 | cathepsin propeptide inhibitor domain protein |
           LC | chr7:33443869-33443288 | 20130731
          Length = 105

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 3/100 (3%)

Query: 156 DSDRLRSSEVENRNPNPDGSYFHSETEAR-ELFEIWCKQYHKTYPSEEEKLYRFGVFKKT 214
           ++ +LR+S+++    +     F+ + +A  E FE WCK+Y++TY SE+EK YRF VFKK 
Sbjct: 2   EATKLRASDLQELLVSRFQERFYPQYQATYENFEDWCKEYNRTYSSEKEKHYRFKVFKKR 61

Query: 215 HELCVRENQKHADPLYRSLGTNGFGDLTMDEKMEVFGAGP 254
           +    R NQ         L  N F DL+  E  ++    P
Sbjct: 62  YATVTRHNQIGNSG--SELSLNDFADLSWVELAQLREGRP 99


>Medtr3g112430.1 | papain family cysteine protease | HC |
           chr3:52684152-52681029 | 20130731
          Length = 443

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 2/64 (3%)

Query: 182 EARELFEIWCKQYHKTYPSEEEKLYRFGVFKKTHELCVRENQKHADPLYRSLGTNGFGDL 241
           +  +LF+ W KQ+ KTYPSEEEK YRF VF+  +   V ++ +  +  Y +L  N F DL
Sbjct: 31  DTSKLFQEWSKQHGKTYPSEEEKRYRFKVFQDNYAF-VSQHNEMGNSSY-TLSLNAFADL 88

Query: 242 TMDE 245
           T  E
Sbjct: 89  THHE 92