Miyakogusa Predicted Gene

Lj1g3v2095730.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2095730.1 tr|A9TFK0|A9TFK0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_144873,36.36,6e-18,seg,NULL; FAMILY NOT
NAMED,NULL,CUFF.28470.1
         (313 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g110460.4 | transmembrane protein, putative | HC | chr3:51...   356   2e-98
Medtr3g110460.1 | transmembrane protein, putative | HC | chr3:51...   355   3e-98
Medtr3g110460.2 | transmembrane protein, putative | HC | chr3:51...   355   3e-98
Medtr3g110460.3 | transmembrane protein, putative | HC | chr3:51...   354   5e-98
Medtr8g102160.1 | transmembrane protein, putative | HC | chr8:42...   176   4e-44
Medtr5g013800.1 | transmembrane protein, putative | HC | chr5:45...   149   3e-36

>Medtr3g110460.4 | transmembrane protein, putative | HC |
           chr3:51645798-51637416 | 20130731
          Length = 817

 Score =  356 bits (913), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 189/295 (64%), Positives = 210/295 (71%), Gaps = 5/295 (1%)

Query: 22  SRQCACDD-----EFSVTDLDWSVFHQDYSXXXXXXXXXXXXSVSCVDDLGGVGTLDTTC 76
           +R C CD+     EFSVTDLDW++FHQDYS            SVSCVDDLGGVG+LDTTC
Sbjct: 20  ARDCVCDELEEHEEFSVTDLDWNLFHQDYSPPAPPPPPPHPPSVSCVDDLGGVGSLDTTC 79

Query: 77  KITEDANLTRGVYIAGEGNFNILPGVRFHCEIPGCWITVNVTGNFSLGSNASIVTGAFEL 136
           +I  DANLTR VYIAG+GNFNILPGVRFHCEIPGC ITVNVTGNFSLG+N+SI+TGAF L
Sbjct: 80  QIANDANLTRDVYIAGKGNFNILPGVRFHCEIPGCIITVNVTGNFSLGNNSSILTGAFVL 139

Query: 137 ESEYAVFENGSVVNTTCMAGDPPPQTSXXXXXXXXXXXXXXXXXXXCLVDTKKLPEDVWG 196
           E+  A F N SVVNTT MAG PPPQTS                   CL DT KLPEDVWG
Sbjct: 140 EAANAGFGNFSVVNTTAMAGSPPPQTSGTPQGVDGGGGGHGGRGASCLEDTAKLPEDVWG 199

Query: 197 GDAYSWSSLQNPSSFGSRGASTSKESEYGGLGGGVVRLTIHKIVEMNASLLAEXXXXXXX 256
           GDAYSW++LQ P SFGS G STSKES+YGGLGGG+V + +HK++EMNASLLAE       
Sbjct: 200 GDAYSWATLQRPESFGSGGGSTSKESDYGGLGGGIVNMVVHKVLEMNASLLAEGGDGGTK 259

Query: 257 XXXXXXXSIYIKAYRMTGNGIISACXXXXXXXXXXXRVSVDVFSRHDEPKISVHG 311
                  SIYIK YRMTG+G+ISAC           RVSVDVFSRHDEPKI VHG
Sbjct: 260 GGGGSGGSIYIKGYRMTGSGMISACGGNGFAGGGGGRVSVDVFSRHDEPKIYVHG 314


>Medtr3g110460.1 | transmembrane protein, putative | HC |
           chr3:51645866-51631348 | 20130731
          Length = 1447

 Score =  355 bits (911), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 189/295 (64%), Positives = 210/295 (71%), Gaps = 5/295 (1%)

Query: 22  SRQCACDD-----EFSVTDLDWSVFHQDYSXXXXXXXXXXXXSVSCVDDLGGVGTLDTTC 76
           +R C CD+     EFSVTDLDW++FHQDYS            SVSCVDDLGGVG+LDTTC
Sbjct: 20  ARDCVCDELEEHEEFSVTDLDWNLFHQDYSPPAPPPPPPHPPSVSCVDDLGGVGSLDTTC 79

Query: 77  KITEDANLTRGVYIAGEGNFNILPGVRFHCEIPGCWITVNVTGNFSLGSNASIVTGAFEL 136
           +I  DANLTR VYIAG+GNFNILPGVRFHCEIPGC ITVNVTGNFSLG+N+SI+TGAF L
Sbjct: 80  QIANDANLTRDVYIAGKGNFNILPGVRFHCEIPGCIITVNVTGNFSLGNNSSILTGAFVL 139

Query: 137 ESEYAVFENGSVVNTTCMAGDPPPQTSXXXXXXXXXXXXXXXXXXXCLVDTKKLPEDVWG 196
           E+  A F N SVVNTT MAG PPPQTS                   CL DT KLPEDVWG
Sbjct: 140 EAANAGFGNFSVVNTTAMAGSPPPQTSGTPQGVDGGGGGHGGRGASCLEDTAKLPEDVWG 199

Query: 197 GDAYSWSSLQNPSSFGSRGASTSKESEYGGLGGGVVRLTIHKIVEMNASLLAEXXXXXXX 256
           GDAYSW++LQ P SFGS G STSKES+YGGLGGG+V + +HK++EMNASLLAE       
Sbjct: 200 GDAYSWATLQRPESFGSGGGSTSKESDYGGLGGGIVNMVVHKVLEMNASLLAEGGDGGTK 259

Query: 257 XXXXXXXSIYIKAYRMTGNGIISACXXXXXXXXXXXRVSVDVFSRHDEPKISVHG 311
                  SIYIK YRMTG+G+ISAC           RVSVDVFSRHDEPKI VHG
Sbjct: 260 GGGGSGGSIYIKGYRMTGSGMISACGGNGFAGGGGGRVSVDVFSRHDEPKIYVHG 314


>Medtr3g110460.2 | transmembrane protein, putative | HC |
           chr3:51645866-51631348 | 20130731
          Length = 1447

 Score =  355 bits (911), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 189/295 (64%), Positives = 210/295 (71%), Gaps = 5/295 (1%)

Query: 22  SRQCACDD-----EFSVTDLDWSVFHQDYSXXXXXXXXXXXXSVSCVDDLGGVGTLDTTC 76
           +R C CD+     EFSVTDLDW++FHQDYS            SVSCVDDLGGVG+LDTTC
Sbjct: 20  ARDCVCDELEEHEEFSVTDLDWNLFHQDYSPPAPPPPPPHPPSVSCVDDLGGVGSLDTTC 79

Query: 77  KITEDANLTRGVYIAGEGNFNILPGVRFHCEIPGCWITVNVTGNFSLGSNASIVTGAFEL 136
           +I  DANLTR VYIAG+GNFNILPGVRFHCEIPGC ITVNVTGNFSLG+N+SI+TGAF L
Sbjct: 80  QIANDANLTRDVYIAGKGNFNILPGVRFHCEIPGCIITVNVTGNFSLGNNSSILTGAFVL 139

Query: 137 ESEYAVFENGSVVNTTCMAGDPPPQTSXXXXXXXXXXXXXXXXXXXCLVDTKKLPEDVWG 196
           E+  A F N SVVNTT MAG PPPQTS                   CL DT KLPEDVWG
Sbjct: 140 EAANAGFGNFSVVNTTAMAGSPPPQTSGTPQGVDGGGGGHGGRGASCLEDTAKLPEDVWG 199

Query: 197 GDAYSWSSLQNPSSFGSRGASTSKESEYGGLGGGVVRLTIHKIVEMNASLLAEXXXXXXX 256
           GDAYSW++LQ P SFGS G STSKES+YGGLGGG+V + +HK++EMNASLLAE       
Sbjct: 200 GDAYSWATLQRPESFGSGGGSTSKESDYGGLGGGIVNMVVHKVLEMNASLLAEGGDGGTK 259

Query: 257 XXXXXXXSIYIKAYRMTGNGIISACXXXXXXXXXXXRVSVDVFSRHDEPKISVHG 311
                  SIYIK YRMTG+G+ISAC           RVSVDVFSRHDEPKI VHG
Sbjct: 260 GGGGSGGSIYIKGYRMTGSGMISACGGNGFAGGGGGRVSVDVFSRHDEPKIYVHG 314


>Medtr3g110460.3 | transmembrane protein, putative | HC |
           chr3:51645798-51635106 | 20130731
          Length = 1070

 Score =  354 bits (909), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 189/295 (64%), Positives = 210/295 (71%), Gaps = 5/295 (1%)

Query: 22  SRQCACDD-----EFSVTDLDWSVFHQDYSXXXXXXXXXXXXSVSCVDDLGGVGTLDTTC 76
           +R C CD+     EFSVTDLDW++FHQDYS            SVSCVDDLGGVG+LDTTC
Sbjct: 20  ARDCVCDELEEHEEFSVTDLDWNLFHQDYSPPAPPPPPPHPPSVSCVDDLGGVGSLDTTC 79

Query: 77  KITEDANLTRGVYIAGEGNFNILPGVRFHCEIPGCWITVNVTGNFSLGSNASIVTGAFEL 136
           +I  DANLTR VYIAG+GNFNILPGVRFHCEIPGC ITVNVTGNFSLG+N+SI+TGAF L
Sbjct: 80  QIANDANLTRDVYIAGKGNFNILPGVRFHCEIPGCIITVNVTGNFSLGNNSSILTGAFVL 139

Query: 137 ESEYAVFENGSVVNTTCMAGDPPPQTSXXXXXXXXXXXXXXXXXXXCLVDTKKLPEDVWG 196
           E+  A F N SVVNTT MAG PPPQTS                   CL DT KLPEDVWG
Sbjct: 140 EAANAGFGNFSVVNTTAMAGSPPPQTSGTPQGVDGGGGGHGGRGASCLEDTAKLPEDVWG 199

Query: 197 GDAYSWSSLQNPSSFGSRGASTSKESEYGGLGGGVVRLTIHKIVEMNASLLAEXXXXXXX 256
           GDAYSW++LQ P SFGS G STSKES+YGGLGGG+V + +HK++EMNASLLAE       
Sbjct: 200 GDAYSWATLQRPESFGSGGGSTSKESDYGGLGGGIVNMVVHKVLEMNASLLAEGGDGGTK 259

Query: 257 XXXXXXXSIYIKAYRMTGNGIISACXXXXXXXXXXXRVSVDVFSRHDEPKISVHG 311
                  SIYIK YRMTG+G+ISAC           RVSVDVFSRHDEPKI VHG
Sbjct: 260 GGGGSGGSIYIKGYRMTGSGMISACGGNGFAGGGGGRVSVDVFSRHDEPKIYVHG 314


>Medtr8g102160.1 | transmembrane protein, putative | HC |
           chr8:42960250-42971543 | 20130731
          Length = 1402

 Score =  176 bits (445), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/279 (37%), Positives = 146/279 (52%), Gaps = 2/279 (0%)

Query: 35  DLDWSVFHQDYSXXXXXXXXXXXX--SVSCVDDLGGVGTLDTTCKITEDANLTRGVYIAG 92
           D +++ F+ DY+              S+SC   L G+G+L T+C +         VYI G
Sbjct: 2   DSEFNSFYSDYTPPSPPPPPPEPHPPSLSCEQGLSGIGSLSTSCDLNSSIIFDGDVYIEG 61

Query: 93  EGNFNILPGVRFHCEIPGCWITVNVTGNFSLGSNASIVTGAFELESEYAVFENGSVVNTT 152
            G+ NILPGV   C I GC I +N++ +F+L +++ I+ G   + ++ A   +GSVVN T
Sbjct: 62  NGSLNILPGVNLTCPISGCVIKINMSEDFTLQNDSVIIAGTVYVAAKNANLFDGSVVNVT 121

Query: 153 CMAGDPPPQTSXXXXXXXXXXXXXXXXXXXCLVDTKKLPEDVWGGDAYSWSSLQNPSSFG 212
            +AG PP QTS                   C+ D  KLP+DVWGGDAYSWSSL  P S+G
Sbjct: 122 GLAGSPPAQTSGEPSGTQGAGGGYGGRGATCVSDNTKLPDDVWGGDAYSWSSLHEPWSYG 181

Query: 213 SRGASTSKESEYGGLGGGVVRLTIHKIVEMNASLLAEXXXXXXXXXXXXXXSIYIKAYRM 272
           S+G +T K   YGG GGG +   +   VE++  LLA               SI++KA+RM
Sbjct: 182 SKGGTTVKNESYGGGGGGRIWFEVVDTVEVSGDLLANGGDGGIKGGGGSGGSIFVKAHRM 241

Query: 273 TGNGIISACXXXXXXXXXXXRVSVDVFSRHDEPKISVHG 311
           TG G ISA            R+S+ VFSRHD     +HG
Sbjct: 242 TGTGTISATGGGGFAGGGGGRISIHVFSRHDNTDFFIHG 280


>Medtr5g013800.1 | transmembrane protein, putative | HC |
           chr5:4526714-4513931 | 20130731
          Length = 1437

 Score =  149 bits (376), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 127/253 (50%), Gaps = 5/253 (1%)

Query: 59  SVSCVDDLGGVGTLDTTCKITEDANLTRGVYIAGEGNFNILPGVRFHCEIPGCWITVNVT 118
           SVSC +DL GVG+ +TTC ++    L   + I G GN  IL  V   C +  C ITVNV+
Sbjct: 62  SVSC-EDLEGVGSFNTTCLLSSTHYLKSDILIYGTGNLEILSHVSLLCPVEECMITVNVS 120

Query: 119 GNFSLGSNASIVTGAFELESEYAVFENGSVVNTTCMAGDPPPQTSXXXXXXXXXXXXXXX 178
           GN  LG N+SIV  +  + +     +  S +N++ + G PP QTS               
Sbjct: 121 GNIKLGQNSSIVASSVIISAANVTMDYISSINSSSLGGAPPSQTSGTPVNNEGAGGGHGG 180

Query: 179 XXXXCLVDTKKLPEDVWGGDAYSWSSLQNPSSFGSRGASTSKESEYGGLGGGVVRLTIHK 238
               C    KK  +  WGGD Y+WSSL  P S+GS+G   S E +YGG GGG ++L    
Sbjct: 181 RGASC----KKTNKTNWGGDVYAWSSLAEPWSYGSKGGGKSAEQKYGGNGGGRIKLLAKD 236

Query: 239 IVEMNASLLAEXXXXXXXXXXXXXXSIYIKAYRMTGNGIISACXXXXXXXXXXXRVSVDV 298
            + +N S+ AE              SI + A ++ G GIISA            R+S++ 
Sbjct: 237 TIYLNGSVTAEGGDGGYDGGGGSGGSIIVNAVKLKGYGIISAAGGMGWGGGGGGRISLNC 296

Query: 299 FSRHDEPKISVHG 311
           +S  ++ KI+VHG
Sbjct: 297 YSIQEDFKITVHG 309