Miyakogusa Predicted Gene
- Lj1g3v2068760.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2068760.1 tr|G7J3F4|G7J3F4_MEDTR Dioxygenase RAMOSUS1
OS=Medicago truncatula GN=MTR_3g109610 PE=4
SV=1,83.13,0,RPE65,Carotenoid oxygenase; BETA-CAROTENE
DIOXYGENASE,NULL; BETA-CAROTENE DIOXYGENASE,Carotenoid
oxy,CUFF.28436.1
(566 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g109610.1 | carotenoid cleavage dioxygenase | HC | chr3:51... 977 0.0
Medtr7g063800.1 | carotenoid cleavage dioxygenase | HC | chr7:23... 965 0.0
Medtr3g109610.2 | carotenoid cleavage dioxygenase | HC | chr3:51... 834 0.0
Medtr5g025230.1 | carotenoid cleavage dioxygenase 4a-6 | HC | ch... 109 9e-24
Medtr5g025250.1 | carotenoid cleavage dioxygenase 4a-6 | HC | ch... 108 2e-23
Medtr5g025270.1 | carotenoid cleavage dioxygenase 4a-6 | HC | ch... 100 3e-21
Medtr2g070460.1 | 9-cis-epoxycarotenoid dioxygenase | HC | chr2:... 91 3e-18
Medtr8g037275.1 | carotenoid 9,10(9',10')-cleavage dioxygenase |... 87 4e-17
Medtr8g037290.1 | carotenoid 9,10(9',10')-cleavage dioxygenase |... 82 1e-15
Medtr8g037315.1 | carotenoid cleavage dioxygenase | HC | chr8:13... 82 2e-15
Medtr8g037310.1 | carotenoid 9,10(9',10')-cleavage dioxygenase |... 78 3e-14
Medtr7g045370.1 | carotenoid cleavage dioxygenase | HC | chr7:15... 54 3e-07
>Medtr3g109610.1 | carotenoid cleavage dioxygenase | HC |
chr3:51268479-51271917 | 20130731
Length = 565
Score = 977 bits (2525), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/569 (83%), Positives = 517/569 (90%), Gaps = 7/569 (1%)
Query: 1 MAFIASSPIM-NSISWPTMVVSDM-SHIVKDGFSFRNNNKGMHKGQHHLQG-LTVANVAS 57
MAF AS I+ N IS MVV DM + + FSFRN KG++KGQH+L+ LTV NV S
Sbjct: 1 MAFTASPAIIRNPISKQNMVVCDMLDNTCRKKFSFRN--KGIYKGQHNLRDHLTVTNVVS 58
Query: 58 PSVPVIAPQREEPSGTSDDGHSQHHHVAWTSIPRERWEGELAVQGQIPFWLKGTYIRNGP 117
PS VIAP P S+ HHVAWTSIP+ERWEGEL VQG IP WLKGTYIRNGP
Sbjct: 59 PSR-VIAPP-PPPEKRSETTGDHQHHVAWTSIPQERWEGELLVQGHIPLWLKGTYIRNGP 116
Query: 118 GMWHIGDYNFRHLFDGYATLVKLNFENGRLIAGHRQIESQAYEAAKKNQKICYREFSEVP 177
GMW+IGDYNFRHLFDGYATLV L+FE+GRL+AGHRQ+ESQAY+AAKKNQKICYREFSEVP
Sbjct: 117 GMWNIGDYNFRHLFDGYATLVGLHFEDGRLVAGHRQVESQAYQAAKKNQKICYREFSEVP 176
Query: 178 KAESFLAYVGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPDTLDTLRK 237
KAE+FLAYVGELA+LFSG+SLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPDTL+T+ K
Sbjct: 177 KAENFLAYVGELANLFSGSSLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPDTLETIGK 236
Query: 238 FEYSDSLGGLIHSAHPIVTDNEFLTLLPDLVRPGYLVVRMEPGTNERKVIGRVDCRGGPS 297
F+YSDSLGGLIHSAHPIVTDNEFLTL+PDLV+PGYLV RMEPG+NERKVIGRVDCRGG S
Sbjct: 237 FDYSDSLGGLIHSAHPIVTDNEFLTLIPDLVKPGYLVARMEPGSNERKVIGRVDCRGGTS 296
Query: 298 PGWVHSFPATDHYVIVPEMPLRYCAQNLLKAEPTPLYKFQWHPESKAFMHVMCKTSGKIV 357
PGWVHSFP T+HYVIVPEMPLRYCAQNLL+AEPTPLYKFQWHPESKAFMHVMCKTSGKIV
Sbjct: 297 PGWVHSFPVTEHYVIVPEMPLRYCAQNLLRAEPTPLYKFQWHPESKAFMHVMCKTSGKIV 356
Query: 358 ASVEVPLFITFHFINAYEEEDEDGRVTAVIADCCEHNSNTDILERLRLQNLRSFNGQDVL 417
ASVEVPLF+TFHFINAYEEEDEDGRVTAVIADCCEHNSNTDIL++LRLQNLRSFNG+DVL
Sbjct: 357 ASVEVPLFVTFHFINAYEEEDEDGRVTAVIADCCEHNSNTDILDKLRLQNLRSFNGEDVL 416
Query: 418 PDAKVGRFRIPLDGSPNGTLEPALDPNEHGKGMDMCSINPNYLGKKYRYAYACGANRPCN 477
PDA+VGRFRIPLDGSP GTL+ ALDPNEHGKGMDMCSINPNYLG KYRYAYACGA RPCN
Sbjct: 417 PDARVGRFRIPLDGSPYGTLDAALDPNEHGKGMDMCSINPNYLGLKYRYAYACGAQRPCN 476
Query: 478 FPNTLTKLDLELKKAKTWYDEGAVPSEPFFVARPGATEEDDGVVISIISGKNGEGYALLL 537
FPNTLTK+DL+ ++AK WY+EGAVPSEPFFV RPGAT+EDDGVVISIIS KNGEGYAL+L
Sbjct: 477 FPNTLTKIDLQSERAKNWYEEGAVPSEPFFVPRPGATKEDDGVVISIISEKNGEGYALVL 536
Query: 538 DGSTFEEIARAEFPHGIPYGLHGCWVPKK 566
DGSTFEEIARA+FP+G+PYGLHGCWVPK+
Sbjct: 537 DGSTFEEIARAKFPYGLPYGLHGCWVPKQ 565
>Medtr7g063800.1 | carotenoid cleavage dioxygenase | HC |
chr7:23306587-23309717 | 20130731
Length = 565
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/569 (81%), Positives = 509/569 (89%), Gaps = 7/569 (1%)
Query: 1 MAFIAS-SPIMNSISWPTMVVSDM-SHIVKDGFSFRNNNKGMHKGQHHLQG-LTVANVAS 57
MAF AS + I N IS +VV DM + +D FSFRN KG++KGQ +LQ LTVAN S
Sbjct: 1 MAFTASPALIRNPISKQNVVVCDMLDNTCRDKFSFRN--KGIYKGQRNLQDHLTVANAVS 58
Query: 58 PSVPVIAPQREEPSGTSDDGHSQHHHVAWTSIPRERWEGELAVQGQIPFWLKGTYIRNGP 117
PS ++ PQ P S+ HHVAWTSI +ERWEGEL VQG IP WLKGTY+RNGP
Sbjct: 59 PSCVIVPPQ--PPEKRSETTGDHQHHVAWTSIHQERWEGELLVQGHIPLWLKGTYLRNGP 116
Query: 118 GMWHIGDYNFRHLFDGYATLVKLNFENGRLIAGHRQIESQAYEAAKKNQKICYREFSEVP 177
GMW+IGDYNFRHLFDGYATLV L+FE+GRLIAGHRQ+ESQAY+AA KNQKICYREFSEVP
Sbjct: 117 GMWNIGDYNFRHLFDGYATLVGLHFEDGRLIAGHRQVESQAYQAAMKNQKICYREFSEVP 176
Query: 178 KAESFLAYVGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPDTLDTLRK 237
KAE+FLAYVGELASLFSG+SLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPDTL+T+ K
Sbjct: 177 KAENFLAYVGELASLFSGSSLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPDTLETIGK 236
Query: 238 FEYSDSLGGLIHSAHPIVTDNEFLTLLPDLVRPGYLVVRMEPGTNERKVIGRVDCRGGPS 297
FEYSDSLGGLIHSAHPIVTD EFLTL+PDL++PGY+V RMEPG+NERKVIGRVDCR G S
Sbjct: 237 FEYSDSLGGLIHSAHPIVTDKEFLTLIPDLIKPGYMVARMEPGSNERKVIGRVDCRAGTS 296
Query: 298 PGWVHSFPATDHYVIVPEMPLRYCAQNLLKAEPTPLYKFQWHPESKAFMHVMCKTSGKIV 357
PGWVHSFP T HYVIVPEMPLRYCAQNLL+AEPTPLYKFQWHPESKAFMHVMCKTSGKIV
Sbjct: 297 PGWVHSFPVTQHYVIVPEMPLRYCAQNLLRAEPTPLYKFQWHPESKAFMHVMCKTSGKIV 356
Query: 358 ASVEVPLFITFHFINAYEEEDEDGRVTAVIADCCEHNSNTDILERLRLQNLRSFNGQDVL 417
ASV VPLF+TFHFINAYEEEDEDGRVTAVIADCCEHNSNTDIL++L+LQNLRSFNG+DVL
Sbjct: 357 ASVNVPLFVTFHFINAYEEEDEDGRVTAVIADCCEHNSNTDILDKLKLQNLRSFNGKDVL 416
Query: 418 PDAKVGRFRIPLDGSPNGTLEPALDPNEHGKGMDMCSINPNYLGKKYRYAYACGANRPCN 477
PDA+VGRFRIPLDGSP GTLE LDPNEHGKGMDMCSINPNYLG KYRYAYACGA RPCN
Sbjct: 417 PDARVGRFRIPLDGSPYGTLEAELDPNEHGKGMDMCSINPNYLGLKYRYAYACGAQRPCN 476
Query: 478 FPNTLTKLDLELKKAKTWYDEGAVPSEPFFVARPGATEEDDGVVISIISGKNGEGYALLL 537
FPNTLTK+DL+ ++AK WY+EGAVPSEPFFV RPGATEEDDGVVISIIS KNGEGYAL+L
Sbjct: 477 FPNTLTKIDLQSERAKNWYEEGAVPSEPFFVPRPGATEEDDGVVISIISEKNGEGYALVL 536
Query: 538 DGSTFEEIARAEFPHGIPYGLHGCWVPKK 566
DGSTFEEIA A+FP+G+PYGLHGCWVPK+
Sbjct: 537 DGSTFEEIATAKFPYGLPYGLHGCWVPKQ 565
>Medtr3g109610.2 | carotenoid cleavage dioxygenase | HC |
chr3:51268545-51271852 | 20130731
Length = 503
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/488 (83%), Positives = 440/488 (90%), Gaps = 7/488 (1%)
Query: 1 MAFIASSPIM-NSISWPTMVVSDM-SHIVKDGFSFRNNNKGMHKGQHHLQG-LTVANVAS 57
MAF AS I+ N IS MVV DM + + FSFRN KG++KGQH+L+ LTV NV S
Sbjct: 1 MAFTASPAIIRNPISKQNMVVCDMLDNTCRKKFSFRN--KGIYKGQHNLRDHLTVTNVVS 58
Query: 58 PSVPVIAPQREEPSGTSDDGHSQHHHVAWTSIPRERWEGELAVQGQIPFWLKGTYIRNGP 117
PS VIAP P S+ HHVAWTSIP+ERWEGEL VQG IP WLKGTYIRNGP
Sbjct: 59 PS-RVIAPP-PPPEKRSETTGDHQHHVAWTSIPQERWEGELLVQGHIPLWLKGTYIRNGP 116
Query: 118 GMWHIGDYNFRHLFDGYATLVKLNFENGRLIAGHRQIESQAYEAAKKNQKICYREFSEVP 177
GMW+IGDYNFRHLFDGYATLV L+FE+GRL+AGHRQ+ESQAY+AAKKNQKICYREFSEVP
Sbjct: 117 GMWNIGDYNFRHLFDGYATLVGLHFEDGRLVAGHRQVESQAYQAAKKNQKICYREFSEVP 176
Query: 178 KAESFLAYVGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPDTLDTLRK 237
KAE+FLAYVGELA+LFSG+SLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPDTL+T+ K
Sbjct: 177 KAENFLAYVGELANLFSGSSLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPDTLETIGK 236
Query: 238 FEYSDSLGGLIHSAHPIVTDNEFLTLLPDLVRPGYLVVRMEPGTNERKVIGRVDCRGGPS 297
F+YSDSLGGLIHSAHPIVTDNEFLTL+PDLV+PGYLV RMEPG+NERKVIGRVDCRGG S
Sbjct: 237 FDYSDSLGGLIHSAHPIVTDNEFLTLIPDLVKPGYLVARMEPGSNERKVIGRVDCRGGTS 296
Query: 298 PGWVHSFPATDHYVIVPEMPLRYCAQNLLKAEPTPLYKFQWHPESKAFMHVMCKTSGKIV 357
PGWVHSFP T+HYVIVPEMPLRYCAQNLL+AEPTPLYKFQWHPESKAFMHVMCKTSGKIV
Sbjct: 297 PGWVHSFPVTEHYVIVPEMPLRYCAQNLLRAEPTPLYKFQWHPESKAFMHVMCKTSGKIV 356
Query: 358 ASVEVPLFITFHFINAYEEEDEDGRVTAVIADCCEHNSNTDILERLRLQNLRSFNGQDVL 417
ASVEVPLF+TFHFINAYEEEDEDGRVTAVIADCCEHNSNTDIL++LRLQNLRSFNG+DVL
Sbjct: 357 ASVEVPLFVTFHFINAYEEEDEDGRVTAVIADCCEHNSNTDILDKLRLQNLRSFNGEDVL 416
Query: 418 PDAKVGRFRIPLDGSPNGTLEPALDPNEHGKGMDMCSINPNYLGKKYRYAYACGANRPCN 477
PDA+VGRFRIPLDGSP GTL+ ALDPNEHGKGMDMCSINPNYLG KYRYAYACGA RPCN
Sbjct: 417 PDARVGRFRIPLDGSPYGTLDAALDPNEHGKGMDMCSINPNYLGLKYRYAYACGAQRPCN 476
Query: 478 FPNTLTKL 485
FPNTLTK+
Sbjct: 477 FPNTLTKV 484
>Medtr5g025230.1 | carotenoid cleavage dioxygenase 4a-6 | HC |
chr5:10231380-10229377 | 20130731
Length = 578
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 216/498 (43%), Gaps = 80/498 (16%)
Query: 98 LAVQGQIPFWLKGTYIRNGPGMWHI--GDYNFRHLFDGYATLVKLNFENGRLIAGHRQIE 155
+ ++G +P L G YIRNGP + G Y HLFDG L + NG+ R ++
Sbjct: 118 VIIKGTLPPSLYGAYIRNGPNPQFLPRGPY---HLFDGDGMLHAITISNGKATLCSRYVK 174
Query: 156 SQAYEAAKK-NQKICYREFSEVPKAESFLAYVGE----LASLFSGASLTDN----ANTGV 206
+ Y+ K ++ FS S +A +A + +G N NT +
Sbjct: 175 TYKYKIENKAGHQLIPNVFSGF---NSLIALAARGSVVVARVLTGQYNPSNGIGLVNTSL 231
Query: 207 VKLGDGRVVCLTETQ-KGSIVIDPD-TLDTLRKFEYSDSLGGLIHSAHPIVTDN--EFLT 262
G+ R+ L E+ + + P+ + T+ +++++ L + +AHP + + E
Sbjct: 232 ALFGN-RLFALGESDLPYEVKLTPNGDIQTMGRYDFNGKLL-MSMTAHPKIDSDTSECFA 289
Query: 263 LLPDLVRPGYLVVRMEPGTNERKVIGRVDCRGGPSPGWVHSFPATDHYVIVPEMPLRYCA 322
+RP R + + + + P ++H F T Y + ++ L
Sbjct: 290 FRYGPIRPFLTYFRFDSNGVKHNDVPVFSMK---RPSFLHDFAITKKYAVFADIQLEMNP 346
Query: 323 QNLL------KAEPTPLYKFQWHP-----ESKAFMHVMCKTSGKIVASVEVPLFITFHFI 371
++ +++P+ + + P ESK + +VP F H I
Sbjct: 347 LGMIFGGSPVRSDPSKVSRIGILPRYANDESK-------------MKWFDVPGFNIMHTI 393
Query: 372 NAYEEEDEDGRVTAVIADCCEHNSNTDILERLRLQNLRSFNGQDVLPDAKVGRFRIPLDG 431
NA++EED G VT V + S ++ER+ L + A + + RI ++
Sbjct: 394 NAWDEED-GGTVTLVATNIL---SVQHVMERMDLIH------------AMIEKVRINVE- 436
Query: 432 SPNGTLEPALDPNEHGKGMDMCSINPNYLGKKYRYAYACGANRPCNFPNTLTKLDLELKK 491
+ T +P + +D+ IN ++LGKK R+ YA N F + + K+D+ LK
Sbjct: 437 TGLVTRQPL-----SARNLDLAVINNDFLGKKSRFVYAAIGNPMPKF-SGVVKIDV-LKG 489
Query: 492 AKT---WYDEGAVPSEPFFVARPGATEEDDGVVISII-SGKNGEGYALLLDGST--FEEI 545
+ Y EG EPFFVA G EEDDG ++S + K GE L++D + FE +
Sbjct: 490 EEVGCRLYGEGCYGGEPFFVAMEGGEEEDDGYLVSYVHDEKKGESKFLVMDAKSPEFEIV 549
Query: 546 ARAEFPHGIPYGLHGCWV 563
A + P +PYG HG +V
Sbjct: 550 AEVKLPRRVPYGFHGLFV 567
>Medtr5g025250.1 | carotenoid cleavage dioxygenase 4a-6 | HC |
chr5:10240138-10238399 | 20130731
Length = 579
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/497 (25%), Positives = 215/497 (43%), Gaps = 80/497 (16%)
Query: 99 AVQGQIPFWLKGTYIRNGPGMWHI--GDYNFRHLFDGYATLVKLNFENGRLIAGHRQIES 156
++G +P L G YIRNGP + G Y HLFDG L + NG+ R +++
Sbjct: 120 VIKGTLPPSLNGVYIRNGPNPQFLPRGPY---HLFDGDGMLHAVKITNGKATLCSRYVQT 176
Query: 157 QAY----EAAKKNQKICYREFSEVP--KAESFLAYVGELASLFSGASLTDNANTGVVKLG 210
Y EA + + F+ + A +A L ++ + NT + G
Sbjct: 177 YKYKIENEAGYQILPNVFSGFNSLIGLAARGSVAVARVLTGQYNPINGIGLINTSLALFG 236
Query: 211 DGRVVCLTETQ-KGSIVIDPD-TLDTLRKFEYSDSLGGLIHSAHPIVTDN--EFLTLLPD 266
+ R+ L E+ I + P+ + T+ +++++ L + +AHP + + E
Sbjct: 237 N-RLFALGESDLPYEIKVTPNGDIQTIGRYDFNGKLF-MNMTAHPKIDSDTGECFAYRYG 294
Query: 267 LVRPGYLVVRMEPGTNERKVIGRVDCRGGPSPGWVHSFPATDHYVIVPEMPLRYCAQNLL 326
L+RP R + + + + P ++H F T Y + ++ L +++
Sbjct: 295 LIRPFLTYFRFDSNGVKHNDVPVFSMK---RPSFLHDFAITKKYALFADIQLEINPLDMI 351
Query: 327 ------KAEPTPLYKFQWHP-----ESKAFMHVMCKTSGKIVASVEVPLFITFHFINAYE 375
+++P+ + + P ESK + +VP H INA++
Sbjct: 352 FGGSPVRSDPSKVPRIGILPRYADNESK-------------MKWFDVPGLNIMHLINAWD 398
Query: 376 EEDEDGRVTAVIAD---CCEHNSNTDILERLRLQNLRSFNGQDVLPDAKVGRFRIPLDGS 432
EED G+ ++A C EH ++ERL L + + + RI ++ +
Sbjct: 399 EED--GKTVTIVAPNILCVEH-----MMERLELIH------------EMIEKVRINVE-T 438
Query: 433 PNGTLEPALDPNEHGKGMDMCSINPNYLGKKYRYAYACGANRPCNFPNTLTKLDLELKKA 492
T +P + +D+ IN +LGKK+R+ YA N F + + K+D+ LK
Sbjct: 439 GIVTRQPL-----SARNLDLAVINNEFLGKKHRFIYAAIGNPMPKF-SGVVKIDV-LKGE 491
Query: 493 KT---WYDEGAVPSEPFFVARPGATEEDDGVVISII-SGKNGEGYALLLDGST--FEEIA 546
+ Y E EPFFVAR EEDDG ++S + K GE L++D + FE +A
Sbjct: 492 EVGCRLYGEDCYGGEPFFVAREDGEEEDDGYLVSYVHDEKKGESRFLVMDAKSPEFEIVA 551
Query: 547 RAEFPHGIPYGLHGCWV 563
+ P +PYG HG +V
Sbjct: 552 EVKLPRRVPYGFHGLFV 568
>Medtr5g025270.1 | carotenoid cleavage dioxygenase 4a-6 | HC |
chr5:10254367-10256492 | 20130731
Length = 581
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 208/494 (42%), Gaps = 73/494 (14%)
Query: 99 AVQGQIPFWLKGTYIRNGPGMWHI--GDYNFRHLFDGYATLVKLNFENGRLIAGHRQIES 156
++G +P L G YIRNGP + G Y HLFDG L + NG+ R +++
Sbjct: 121 VIKGTLPPSLNGVYIRNGPNPQFLPRGPY---HLFDGDGMLHAITISNGKATLCSRYVQT 177
Query: 157 QAY----EAAKKNQKICYREFSEVPKAESFLAYVGELASLFSGASLTDN----ANTGVVK 208
Y EA + + F+ + + + + A + SG N ANT +
Sbjct: 178 YKYKIENEAGYQLIPNVFSGFNSLIASAARGSVTA--ARVISGQYNPSNGIGLANTSLAL 235
Query: 209 LGDGRVVCLTETQ-KGSIVIDPD-TLDTLRKFEYSDSLGGLIHSAHPIVTDN--EFLTLL 264
G+ ++ L E+ I + P+ + T+ +++++ L + +AHP + + E
Sbjct: 236 FGN-KLFALGESDLPYEINLTPNGDIQTIGRYDFNGKLS-MSMTAHPKIDGDTGETFAFR 293
Query: 265 PDLVRPGYLVVRMEPGTNERKVIGRVDCRGGPSPGWVHSFPATDHYVIVPEMPLRYCAQN 324
+ P R + + V P ++H F T Y + ++ L +
Sbjct: 294 YGPMPPFLTYFRFDANGVKHN---DVPVFSMTRPSFLHDFAITKKYAVFTDIQLGMNPLD 350
Query: 325 LLK------AEPTPLYKFQWHPESKAFMHVMCKTSGKIVASVEVPLFITFHFINAYEEED 378
++ ++P+ + + P + M +VP F H IN+++ ED
Sbjct: 351 MISGGSPVGSDPSKVSRIGILPRYASDESKM--------KWFDVPGFNIMHAINSWDGED 402
Query: 379 EDGRVTAVIADC--CEHNSNTDILERLRLQNLRSFNGQDVLPDAKVGRF-RIPLDGSPNG 435
++ VT + + EH +ERL L + + V + K G R PL
Sbjct: 403 DEETVTLIAPNVLSIEHT-----MERLELVHAMI---EKVKINIKTGIVSRQPLSA---- 450
Query: 436 TLEPALDPNEHGKGMDMCSINPNYLGKKYRYAYACGANRPCNFPNTLTKLDLELKKAKT- 494
+ +D IN +Y+GKK R+ YA N P + + K+D+ LK +
Sbjct: 451 ------------RNLDFAVINGDYMGKKNRFVYAAIGN-PMPKISGVVKIDV-LKGEEVG 496
Query: 495 --WYDEGAVPSEPFFVARPGATEEDDGVVISII-SGKNGEGYALLLDGST--FEEIARAE 549
Y EG EPFFVAR EEDDG ++S + K GE L++D + FE +A +
Sbjct: 497 CRLYGEGCYGGEPFFVAREDGEEEDDGYLVSYVHDEKKGESKFLVMDAKSPEFEIVAEVK 556
Query: 550 FPHGIPYGLHGCWV 563
P +PYG HG +V
Sbjct: 557 LPRRVPYGFHGLFV 570
>Medtr2g070460.1 | 9-cis-epoxycarotenoid dioxygenase | HC |
chr2:29673292-29670860 | 20130731
Length = 610
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 123/530 (23%), Positives = 208/530 (39%), Gaps = 91/530 (17%)
Query: 78 HSQHHHVAWTSIPRERWEGELA------------VQGQIPFWLKGTYIRNGPGMWHIGDY 125
Q H + TS PR + G A + G+IP + G Y+RNG +
Sbjct: 119 QEQKHPLPKTSDPRVQIAGNFAPVPEHPVTQSLPITGKIPTNIDGVYLRNGANPLY-EPV 177
Query: 126 NFRHLFDGYATLVKLNFENGRLIAGHRQIESQAYEAAKKNQKICY-REFSEVPK----AE 180
H FDG + + F NG + R E+ K + + + E+ A
Sbjct: 178 AGHHFFDGDGMVHAVKFTNGSVSYSCRFTETHRLAQEKALGRPVFPKAIGELHGHSGIAR 237
Query: 181 SFLAYVGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQ-KGSIVIDPD-TLDTLRKF 238
L Y L L G AN G+V + R++ ++E I + P+ L T+ ++
Sbjct: 238 LALYYARSLCGLVDGTHGMGVANAGLVYFNN-RLLAMSEDDIPYHIRVTPNGDLTTVCRY 296
Query: 239 EYSDSLGGLIHSAHPIV--TDNEFLTLLPDLVRPGYLVVRMEPGTNERKVIGRVDCRGGP 296
++ + L + AHP V D L D+V+ YL R D G
Sbjct: 297 DFDNQLKSTM-IAHPKVDPVDKNMYALSYDVVQKPYLKYF------------RFDASGVK 343
Query: 297 SPG---------WVHSFPATDHYVIVPEMPLRYCAQNLLKAEPTPLYKFQWHPESKAFMH 347
SP +H F T+++V+VP+ + + +++ +Y E +
Sbjct: 344 SPDVEIPLEQPTMMHDFAITENFVVVPDQQVVFKLGEMIRGGSPVVYD----KEKVSRFG 399
Query: 348 VMCKTS--GKIVASVEVPLFITFHFINAYEEEDEDGRVTAVIADC----------CEHNS 395
V+ K + + ++ P FH NA+EE + D V VI C CE N
Sbjct: 400 VLSKNAEDSSEMIWIDAPECFCFHLWNAWEEPENDEVV--VIGSCMTPADSIFNECEENL 457
Query: 396 NTDILERLRLQNLRSFNGQDVLPDAKVGRFRIPLDGSPNGTLEPALDPNEHGKGMDMCSI 455
+ +L +RL + K G+ T P + +E ++ +
Sbjct: 458 ES-VLSEIRL-------------NLKTGK----------STRRPIIKESEQ-VNLEAGMV 492
Query: 456 NPNYLGKKYRYAYACGANRPCNFPNTLTKLDLELKKAKTW-YDEGAVPSEPFFVARPGAT 514
N N LG+K ++AY A P + K+DL + K + Y E EP F+ +
Sbjct: 493 NKNKLGRKTQFAYLALA-EPWPKVSGFAKVDLFSGEVKKYIYGENRFGGEPLFLPNSDSE 551
Query: 515 EEDDGVVISII-SGKNGEGYALLLDGSTFEEIARAEFPHGIPYGLHGCWV 563
EDDG +++ + K + +++ +T + A + P +PYG HG ++
Sbjct: 552 NEDDGYILTFVHDEKEWKSELQIVNAATLKLEASIQLPSRVPYGFHGTFI 601
>Medtr8g037275.1 | carotenoid 9,10(9',10')-cleavage dioxygenase | HC
| chr8:13854442-13849769 | 20130731
Length = 575
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 120/504 (23%), Positives = 201/504 (39%), Gaps = 76/504 (15%)
Query: 97 ELAVQGQIPFWLKGTYIRNGPG--MWHIGDYNFRHLFDGYATLVKLNFENGRLIAGHRQI 154
+L V+G +P L G ++R GP + Y H FDG + L ++G+ +
Sbjct: 100 DLPVKGHLPDCLNGEFVRVGPNPKFSPVAGY---HWFDGDGMIHGLRIKDGKATYVSHFV 156
Query: 155 ESQAYEAAKKNQKICYREFSEVPKAESFLAY----VGELASLFSGASLTDNANTGVVKLG 210
+ + + + + +V L + E + + T ANTG+V
Sbjct: 157 RTSRLKQEEYFGGCKFMKIGDVKGLLGLLMVTIQTLREKLKILDVSYGTGTANTGLV-YH 215
Query: 211 DGRVVCLTETQK--GSIVIDPDTLDTLRKFEYSDSLGGLIHSAHPIVT--DNEFLTLLPD 266
+G+++ L+E K V + L TL +Y L +AHP V E T
Sbjct: 216 NGKLLALSERDKPYAIKVFEDGDLHTLGMLDYEKRLDHYF-TAHPKVDPFTGEMFTF--- 271
Query: 267 LVRPGYLVVRMEPGTNERKVIGRVDCRGGP------SPGWVHSFPATDHYVIVPEMPLRY 320
GY P +VI + P P VH F T++Y I ++P+ +
Sbjct: 272 ----GY---SQTPPYITYRVISKDGYMYDPVPITISDPIMVHDFAITENYAIFMDLPVYF 324
Query: 321 CAQNLLKAEPTPLYKFQWHPESKAFMHVMCKTS--GKIVASVEVPLFITFHFINAYEEED 378
+ ++K F + KA V+ + + K++ E+P FH NA+EEED
Sbjct: 325 RPKEMVKNNKLI---FSFDSTKKARFGVLPRYAKDDKLIRWFELPNCFIFHNANAWEEED 381
Query: 379 EDGRVTAVIADCCEHNSNTDILERLRLQNLRSFNGQDVLPDAKVGRFRIPLDGSPNGTLE 438
+ V+ C +N + D++ L SF+ Q RF + + L
Sbjct: 382 Q-----VVLITCRLNNLDLDMVSEDVKDKLESFSTQ-----LYEMRFNMKTGKASQKKLS 431
Query: 439 PALDPNEHGKGMDMCSINPNYLGKKYRYAYACGANRPCNFPNTLTKLDLELK----KAKT 494
+D +N Y G+K +Y Y + + P + K DL K K K
Sbjct: 432 --------AFSVDFPRVNERYTGRKQKYVYGTILD---SIPTGIVKFDLSAKPDFGKTKL 480
Query: 495 --------WYD--EGAVPSEPFFVAR-PGA-TEEDDGVVISIISGKNG-EGYALLLDGST 541
YD +G S+P +V R PG ++EDDG +I + +N + + ++D T
Sbjct: 481 EIGGNVHGIYDLGQGTFCSDPIYVPRVPGTDSDEDDGYLIFFVHDENTRKSFVHVIDAKT 540
Query: 542 F--EEIARAEFPHGIPYGLHGCWV 563
+ +A E P +PYG H ++
Sbjct: 541 MSADPVAVVELPQRVPYGFHSFFM 564
>Medtr8g037290.1 | carotenoid 9,10(9',10')-cleavage dioxygenase | HC
| chr8:13873459-13869022 | 20130731
Length = 575
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 123/528 (23%), Positives = 205/528 (38%), Gaps = 79/528 (14%)
Query: 76 DGHSQHHHVAWTSIPRERWE---GELAVQGQIPFWLKGTYIRNGPG--MWHIGDYNFRHL 130
D HH +A P + +L V+G +P L G ++R GP + Y H
Sbjct: 76 DSSLSHHWIAGNFAPVKDETPPTKDLPVKGHLPDCLNGEFVRVGPNPKFSPVAGY---HW 132
Query: 131 FDGYATLVKLNFENGRLIAGHRQIESQAYEAAKKNQKICYREFSEVPKAESFLAY----V 186
FDG + L ++G+ + + + + + + +V L +
Sbjct: 133 FDGDGMIHGLRIKDGKATYVSHFVRTSRLKQEEYFGGCKFMKIGDVKGLLGLLMVTIQTL 192
Query: 187 GELASLFSGASLTDNANTGVVKLGDGRVVCLTETQK--GSIVIDPDTLDTLRKFEYSDSL 244
E + + T ANTG+V +G+++ L+E K V + L TL +Y L
Sbjct: 193 REKLKILDVSYGTGTANTGLV-YHNGKLLALSERDKPYAIKVFEDGDLHTLGILDYDKRL 251
Query: 245 GGLIHSAHPIVT--DNEFLTLLPDLVRPGYLVVRMEPGTNERKVIGRVDCRGGP------ 296
++HP + E T GY P +VI + P
Sbjct: 252 DHYF-TSHPKLDPYTGEMFTF-------GY---AQTPPYITYRVISKDGYMYDPVPITIS 300
Query: 297 SPGWVHSFPATDHYVIVPEMPLRYCAQNLLKAEPTPLYKFQWHPESKAFMHVMCKTS--G 354
P VH F T++Y I ++P+ + + ++K F + KA V+ + +
Sbjct: 301 DPIMVHDFAITENYAIFMDLPVYFRPKEMVKNNKLI---FSFDSTKKARFGVLPRYAKDD 357
Query: 355 KIVASVEVPLFITFHFINAYEEEDEDGRVTAVIADCCEHNSNTDILERLRLQNLRSFNGQ 414
K++ E+P FH NA+EEEDE V+ C N + D++ L SF+ +
Sbjct: 358 KLIRWFELPNCFIFHNANAWEEEDE-----VVMITCRLKNLDLDMVSEDVKDKLESFSNE 412
Query: 415 DVLPDAKVGRFRIPLDGSPNGTLEPALDPNEHGKGMDMCSINPNYLGKKYRYAYACGANR 474
RF + + L +D +N Y G+K +Y Y +
Sbjct: 413 -----LYEMRFNMKTGKASQKKLSAF--------SIDFPRVNERYTGRKQKYVYGTILD- 458
Query: 475 PCNFPNTLTKLDLELK----KAKT--------WYD--EGAVPSEPFFVAR-PGA-TEEDD 518
+ + K DL K K K YD G S+P +V R PG +EEDD
Sbjct: 459 --SITTGIVKFDLSAKPDFGKTKLEVGGNVHGIYDLGRGTFCSDPIYVPRVPGTDSEEDD 516
Query: 519 GVVISIISGKN-GEGYALLLDGSTF--EEIARAEFPHGIPYGLHGCWV 563
G +I + +N + + ++D T + +A E P +PYG H ++
Sbjct: 517 GYLIFFVHDENIRKSFVHVIDAKTMSADPVAVVELPQRVPYGFHAFFL 564
>Medtr8g037315.1 | carotenoid cleavage dioxygenase | HC |
chr8:13903093-13896651 | 20130731
Length = 540
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 121/505 (23%), Positives = 201/505 (39%), Gaps = 76/505 (15%)
Query: 97 ELAVQGQIPFWLKGTYIRNGPG--MWHIGDYNFRHLFDGYATLVKLNFENGRLIAGHRQI 154
+L ++G +P L G ++R GP + Y H FDG + L ++G+ R +
Sbjct: 63 DLPIKGHLPDCLNGEFVRVGPNSKFAPVAGY---HWFDGDGMIHGLRIKDGKATYVSRFV 119
Query: 155 ESQAYEAAKKNQKICYREFSEVPKAESFLAYVG-ELASLFSGASLTD------NANTGVV 207
++ K+ + +F ++ + + + L + + D ANT +V
Sbjct: 120 KTSR---LKQEEYFGGSKFMKIGDMKGLFGLLMVNMQMLRAKLKVVDVSYGHGTANTALV 176
Query: 208 KLGDGRVVCLTETQK--GSIVIDPDTLDTLRKFEYSDSLGGLIHSAHPIVT--DNEFLTL 263
+++ L+E K V + L TL +Y LG +AHP V E T
Sbjct: 177 -YHHQKLLALSEGDKPYAIKVFEDGDLQTLGMLDYDKRLGHNF-TAHPKVDPFTGEMFTF 234
Query: 264 LPDLVRPGYLVVRMEPGTNERKVIGRVDCRGGP------SPGWVHSFPATDHYVIVPEMP 317
GY P +VI + P P +H F T++Y I ++P
Sbjct: 235 -------GY---SHTPPYITYRVISKDGFMHDPVPITISEPIMMHDFAITENYSIFMDLP 284
Query: 318 LRYCAQNLLKAEPTPLYKFQWHPESKAFMHVMCKTSGKIVASVEVPLFITFHFINAYEEE 377
L + + ++K + T ++ F +++ + K + E+P FH NA+EEE
Sbjct: 285 LYFRPKEMVKNK-TLIFSFDSTKKARFGVLPRYAKDEKHIRWFELPNCFIFHNANAWEEE 343
Query: 378 DEDGRVTAVIADCCEHNSNTDILERLRLQNLRSFNGQDVLPDAKVGRFRIPLDGSPNGTL 437
DE V+ C N N D++ + L +F + RF + + L
Sbjct: 344 DE-----IVLITCRLENPNLDMVGGAVKEKLDNFANE-----LYEMRFNMKTGEASQKKL 393
Query: 438 EPALDPNEHGKGMDMCSINPNYLGKKYRYAYACGANRPCNFPNTLTKLDLELK--KAKT- 494
+ +D +N +Y G+K RY Y + + K DL K KT
Sbjct: 394 SAS--------AVDFPRVNESYTGRKQRYVYGTELDSIAKV-TGIVKFDLHAKPDSGKTK 444
Query: 495 ---------WYD--EGAVPSEPFFVAR-PGA-TEEDDGVVISIISGKN-GEGYALLLDGS 540
YD G SE +V R PG +EEDDG +I + +N G+ + +LD
Sbjct: 445 LEVGGNVVGHYDLGPGRFGSEAVYVPRVPGTDSEEDDGYLIFFVHDENTGKSFVHVLDAK 504
Query: 541 TF--EEIARAEFPHGIPYGLHGCWV 563
T + +A E P +PYG H +V
Sbjct: 505 TMSADPVAVVELPQRVPYGFHAFFV 529
>Medtr8g037310.1 | carotenoid 9,10(9',10')-cleavage dioxygenase | HC
| chr8:13895762-13890670 | 20130731
Length = 575
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 201/504 (39%), Gaps = 76/504 (15%)
Query: 97 ELAVQGQIPFWLKGTYIRNGPG--MWHIGDYNFRHLFDGYATLVKLNFENGRLIAGHRQI 154
+L V+G +P L G ++R GP + Y H FDG + L ++G+ R +
Sbjct: 100 DLPVKGYLPDCLNGEFVRVGPNPKFSPVAGY---HWFDGDGMIHGLRIKDGKATYVSRFV 156
Query: 155 ESQAYEAAKKNQKICYREFSEVPKAESFLAYV-------GELASLFSGASLTDNANTGVV 207
+ K+ + +F +V + L + E + + T ANTG+V
Sbjct: 157 RTSR---LKQEEYFGGSKFMKVGDIKGLLGVLMVTIQILREKLKILDVSYGTGTANTGLV 213
Query: 208 KLGDGRVVCLTETQK--GSIVIDPDTLDTLRKFEYSDSLGGLIHSAHPIVTDNEFLTLLP 265
+ ++ L+E K V + L TL +Y L +AHP V
Sbjct: 214 -YHNAMLLALSERDKPYAIKVFEDGDLHTLGMLDYDKRLDHYF-TAHPKVD-----PFTG 266
Query: 266 DLVRPGYLVVRMEPGTNERKVIGRVDCRGGP------SPGWVHSFPATDHYVIVPEMPLR 319
D+ GY P +VI + P +P VH F T++Y I ++P+
Sbjct: 267 DMFTFGY---SQTPPYITYRVISKDGYMHDPVPITISNPIMVHDFAITENYAIFMDLPVY 323
Query: 320 YCAQNLLKAEPTPLYKFQWHPESKAFMHVMCKTS--GKIVASVEVPLFITFHFINAYEEE 377
+ + ++K + F + KA V+ + + K + E+P FH NA+EEE
Sbjct: 324 FRPKEMVKNKRLV---FSFDSTKKARFGVLPRYAKDDKHIRWFELPNCFIFHNANAWEEE 380
Query: 378 DEDGRVTAVIADCCEHNSNTDILERLRLQNLRSFNGQ--DVLPDAKVGRFRIPLDGSPNG 435
DE V+ C N + D++ L++F+ + ++ + K G+
Sbjct: 381 DE-----VVLITCRLKNLDLDMVAEDIKDKLKNFSNELYEMRFNMKTGK----------- 424
Query: 436 TLEPALDPNEHGKGMDMCSINPNYLGKKYRYAYAC--GANRP------CNFPNTLTKLDL 487
A +D +N Y G+K +Y Y G+N N K L
Sbjct: 425 ----AAQKKLSTYSVDFPRVNERYTGRKQKYVYGTILGSNATGIIKFDLNAEPNFGKTKL 480
Query: 488 EL-KKAKTWYD--EGAVPSEPFFVAR-PGA-TEEDDGVVISIISGKNGEGYAL-LLDGST 541
E+ YD G S+ +V R PG ++EDDG +I + +N ++ ++D T
Sbjct: 481 EVGGNIHGLYDLGPGTFCSDAIYVPRVPGTDSDEDDGYLIFFVHDENTRKSSVHVIDAKT 540
Query: 542 F--EEIARAEFPHGIPYGLHGCWV 563
+ +A E P +PYG H +V
Sbjct: 541 MSADPVAVVELPQRVPYGFHAFFV 564
>Medtr7g045370.1 | carotenoid cleavage dioxygenase | HC |
chr7:15960760-15955054 | 20130731
Length = 621
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 124/553 (22%), Positives = 206/553 (37%), Gaps = 119/553 (21%)
Query: 99 AVQGQIPF-WLKGTYIRNGPGMWHIGDYNFRHLFDGYATLVKLNFENG----RLIAGHRQ 153
++G IP + G Y GPG++ + H DG+ L F+N + +A + +
Sbjct: 92 VLEGAIPTDFPSGAYYLTGPGIFKDDHGSTVHPLDGHGYLRAFTFDNATNEVKYMAKYIK 151
Query: 154 IESQAYEAAKK--NQKICYREFSEVPKAESFLAYVGELASLFSGASLTDNANTGVVKLGD 211
E+Q E +K + + +R V K + + ++ ANT V+ G
Sbjct: 152 TEAQVEEYDRKTGSWRFTHRGPFSVLKGGKKIGNTKVMKNV---------ANTSVLMWGK 202
Query: 212 GRVVCLTETQKGSIVIDPDTLDTLRKFEYSDSLGGLIHSAHPIVTDNEFLTLLPDLVRP- 270
+++C+ E I+ TLDT+ KF D G H + + + L++P
Sbjct: 203 -KLLCMWEG-GNPYEIESGTLDTIGKFNMVD---GCDMDDHNVNHGGDVWEVAATLLKPI 257
Query: 271 GYLVVRMEPGT--------NERKVIGRVDCRGG--------------------------- 295
Y + +M P + R + V C
Sbjct: 258 LYGIFKMPPKRLLSHYKVDSSRSRLLTVSCNAEDMLLPRSSFTFTEYDNNFKLVEKQEFK 317
Query: 296 -PSPGWVHSFPATD-HYVI---------VPEMPLRYCAQNLLKA-------EPTPLY--- 334
P +H + TD HY++ + M A ++ A +P+Y
Sbjct: 318 IPDHLMIHDWAFTDTHYIVFANRIKLDVLGSMGAVCGASPMISALTVNPSKSTSPIYLLP 377
Query: 335 KFQWHPESKAFMHVMCKTSGKIVASVEVPLFITFHFINAYEEEDEDGRVTAVI-ADCCEH 393
+F PESK K + V L++ H NA+E + G + I A C +
Sbjct: 378 RFPNKPESK-------KRDWRKPLEVPSQLWL-LHVGNAFEVKQAHGNLEIQIQASACSY 429
Query: 394 -----------NSNTDILERLRLQNLRSFNGQDVLPDAKVGRFRIPLDGSPNGTLEPALD 442
N T L+ ++ + G++ LP + + I LD N
Sbjct: 430 QWFNFRKLFGYNWQTQKLD----PSIMNVKGENALP--HLVQVSIKLDSDYNCQECDVKP 483
Query: 443 PNEHGKGMDMCSINPNYLGKKYRYAYAC---GANRPC-NFP-NTLTKLDLELKKAKTWY- 496
N+ K D + NP++ GK+ +Y YA G+ + +FP +T+ K DL K W
Sbjct: 484 INKWKKSADFPATNPSFSGKQNKYLYAATTLGSRKTLPSFPFDTIVKFDLVNNSVKAWTA 543
Query: 497 DEGAVPSEPFFVARPGATEEDDGVVISIISGKNGEGYALLL-----DGSTFEEIARAEFP 551
EP FV P EEDDG ++ + + + L++ G+ +AR E P
Sbjct: 544 GSRKFVGEPIFV--PKGEEEDDGYLLVVEYATSMQRCCLVILNPKEIGTKKALVARIEIP 601
Query: 552 H--GIPYGLHGCW 562
P G HG W
Sbjct: 602 MHLNFPLGFHGLW 614