Miyakogusa Predicted Gene

Lj1g3v2068750.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2068750.1 Non Characterized Hit- tr|I3T5J8|I3T5J8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.36,0,SUBFAMILY
NOT NAMED,NULL; UNCHARACTERIZED,Transcriptional regulator TACO1-like;
Transcrip_reg_TACO1,,CUFF.28400.1
         (312 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g109620.3 | transcriptional regulatory plant protein, puta...   375   e-104
Medtr3g109620.2 | transcriptional regulatory plant protein, puta...   375   e-104
Medtr3g109620.4 | transcriptional regulatory plant protein, puta...   375   e-104
Medtr3g109620.5 | transcriptional regulatory plant protein, puta...   360   e-100
Medtr3g109620.1 | transcriptional regulatory plant protein, puta...   303   1e-82

>Medtr3g109620.3 | transcriptional regulatory plant protein,
           putative | HC | chr3:51279195-51271955 | 20130731
          Length = 321

 Score =  375 bits (963), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/320 (64%), Positives = 230/320 (71%), Gaps = 11/320 (3%)

Query: 4   FRALLQLNTLSNL-VSSTRLT----LHLPRNNHVLNKSLLLWDATANATFTGSSQVRK-- 56
            R  L L+  S   V STRL+      L RN H+++ SLL  +      +   +  R   
Sbjct: 2   LRVALSLHAFSTRGVFSTRLSSSSFFLLHRNIHIISPSLLDANVINFTNYHNDNNRRVRV 61

Query: 57  ----ISTTSFVCMGRRSSKIARRKGTQDVKRAKLYSRIXXXXXXXXXXXXPNVATNSDLA 112
               I T++ +CMGRRS KIA RK   + K+ KLYSRI            PNV +NS LA
Sbjct: 62  RRRTIWTSTPLCMGRRSCKIAGRKEANNAKKMKLYSRIGKEVVSAVKKGGPNVTSNSALA 121

Query: 113 AVLEKAKELDVPKDIIERNIKRASEKGQEAYIEKTYEVYGYGGVSIVVEVSTDKINRSVA 172
           AVLEK KELDVPKDI+ERNIK+A+EKGQE YIEK YEVYGYGGVS+VVEVSTDKI RSVA
Sbjct: 122 AVLEKVKELDVPKDIVERNIKKATEKGQEDYIEKIYEVYGYGGVSMVVEVSTDKITRSVA 181

Query: 173 KIREVVRDYGGKMADPGSVMFKFRRARVVNIKVTNADKDQLLAIALDAGAEDVIXXXXXX 232
           KIREV++DYGGKMAD GSV+FKFRRARVV+IKVTNADKD LL IALDAGAEDVI      
Sbjct: 182 KIREVIKDYGGKMADSGSVLFKFRRARVVSIKVTNADKDHLLGIALDAGAEDVIDPPTYE 241

Query: 233 XXXXXXXXXXXXKIVGSSENYSSILSKLREEGIDFVPDSGSELLPNATIEVDDEAMDLNK 292
                       KIVGSSENYSSILSKLREEGI+F PD+GSELLPN TIEVDDEAMDLNK
Sbjct: 242 DDTEEDRSERYYKIVGSSENYSSILSKLREEGIEFEPDNGSELLPNTTIEVDDEAMDLNK 301

Query: 293 ELMSNLLELDDVDAVYTDQK 312
           ELMS LLELDDVDAVYTDQK
Sbjct: 302 ELMSKLLELDDVDAVYTDQK 321


>Medtr3g109620.2 | transcriptional regulatory plant protein,
           putative | HC | chr3:51279193-51271961 | 20130731
          Length = 321

 Score =  375 bits (963), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/320 (64%), Positives = 230/320 (71%), Gaps = 11/320 (3%)

Query: 4   FRALLQLNTLSNL-VSSTRLT----LHLPRNNHVLNKSLLLWDATANATFTGSSQVRK-- 56
            R  L L+  S   V STRL+      L RN H+++ SLL  +      +   +  R   
Sbjct: 2   LRVALSLHAFSTRGVFSTRLSSSSFFLLHRNIHIISPSLLDANVINFTNYHNDNNRRVRV 61

Query: 57  ----ISTTSFVCMGRRSSKIARRKGTQDVKRAKLYSRIXXXXXXXXXXXXPNVATNSDLA 112
               I T++ +CMGRRS KIA RK   + K+ KLYSRI            PNV +NS LA
Sbjct: 62  RRRTIWTSTPLCMGRRSCKIAGRKEANNAKKMKLYSRIGKEVVSAVKKGGPNVTSNSALA 121

Query: 113 AVLEKAKELDVPKDIIERNIKRASEKGQEAYIEKTYEVYGYGGVSIVVEVSTDKINRSVA 172
           AVLEK KELDVPKDI+ERNIK+A+EKGQE YIEK YEVYGYGGVS+VVEVSTDKI RSVA
Sbjct: 122 AVLEKVKELDVPKDIVERNIKKATEKGQEDYIEKIYEVYGYGGVSMVVEVSTDKITRSVA 181

Query: 173 KIREVVRDYGGKMADPGSVMFKFRRARVVNIKVTNADKDQLLAIALDAGAEDVIXXXXXX 232
           KIREV++DYGGKMAD GSV+FKFRRARVV+IKVTNADKD LL IALDAGAEDVI      
Sbjct: 182 KIREVIKDYGGKMADSGSVLFKFRRARVVSIKVTNADKDHLLGIALDAGAEDVIDPPTYE 241

Query: 233 XXXXXXXXXXXXKIVGSSENYSSILSKLREEGIDFVPDSGSELLPNATIEVDDEAMDLNK 292
                       KIVGSSENYSSILSKLREEGI+F PD+GSELLPN TIEVDDEAMDLNK
Sbjct: 242 DDTEEDRSERYYKIVGSSENYSSILSKLREEGIEFEPDNGSELLPNTTIEVDDEAMDLNK 301

Query: 293 ELMSNLLELDDVDAVYTDQK 312
           ELMS LLELDDVDAVYTDQK
Sbjct: 302 ELMSKLLELDDVDAVYTDQK 321


>Medtr3g109620.4 | transcriptional regulatory plant protein,
           putative | HC | chr3:51279195-51271955 | 20130731
          Length = 321

 Score =  375 bits (963), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/320 (64%), Positives = 230/320 (71%), Gaps = 11/320 (3%)

Query: 4   FRALLQLNTLSNL-VSSTRLT----LHLPRNNHVLNKSLLLWDATANATFTGSSQVRK-- 56
            R  L L+  S   V STRL+      L RN H+++ SLL  +      +   +  R   
Sbjct: 2   LRVALSLHAFSTRGVFSTRLSSSSFFLLHRNIHIISPSLLDANVINFTNYHNDNNRRVRV 61

Query: 57  ----ISTTSFVCMGRRSSKIARRKGTQDVKRAKLYSRIXXXXXXXXXXXXPNVATNSDLA 112
               I T++ +CMGRRS KIA RK   + K+ KLYSRI            PNV +NS LA
Sbjct: 62  RRRTIWTSTPLCMGRRSCKIAGRKEANNAKKMKLYSRIGKEVVSAVKKGGPNVTSNSALA 121

Query: 113 AVLEKAKELDVPKDIIERNIKRASEKGQEAYIEKTYEVYGYGGVSIVVEVSTDKINRSVA 172
           AVLEK KELDVPKDI+ERNIK+A+EKGQE YIEK YEVYGYGGVS+VVEVSTDKI RSVA
Sbjct: 122 AVLEKVKELDVPKDIVERNIKKATEKGQEDYIEKIYEVYGYGGVSMVVEVSTDKITRSVA 181

Query: 173 KIREVVRDYGGKMADPGSVMFKFRRARVVNIKVTNADKDQLLAIALDAGAEDVIXXXXXX 232
           KIREV++DYGGKMAD GSV+FKFRRARVV+IKVTNADKD LL IALDAGAEDVI      
Sbjct: 182 KIREVIKDYGGKMADSGSVLFKFRRARVVSIKVTNADKDHLLGIALDAGAEDVIDPPTYE 241

Query: 233 XXXXXXXXXXXXKIVGSSENYSSILSKLREEGIDFVPDSGSELLPNATIEVDDEAMDLNK 292
                       KIVGSSENYSSILSKLREEGI+F PD+GSELLPN TIEVDDEAMDLNK
Sbjct: 242 DDTEEDRSERYYKIVGSSENYSSILSKLREEGIEFEPDNGSELLPNTTIEVDDEAMDLNK 301

Query: 293 ELMSNLLELDDVDAVYTDQK 312
           ELMS LLELDDVDAVYTDQK
Sbjct: 302 ELMSKLLELDDVDAVYTDQK 321


>Medtr3g109620.5 | transcriptional regulatory plant protein,
           putative | HC | chr3:51279195-51271955 | 20130731
          Length = 346

 Score =  360 bits (925), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 210/348 (60%), Positives = 232/348 (66%), Gaps = 42/348 (12%)

Query: 4   FRALLQLNTLSNL-VSSTRLT----LHLPRNNHVLNKSLLLWDATANATFTG-------- 50
            R  L L+  S   V STRL+      L RN H+++ SLL  DA     FT         
Sbjct: 2   LRVALSLHAFSTRGVFSTRLSSSSFFLLHRNIHIISPSLL--DANV-INFTNYHNDNNRR 58

Query: 51  -SSQVRKISTTSFVCMGRRSSKIARRKGTQDVKRAKLYSRIXXXXXXXXXXXXPNVATNS 109
              + R I T++ +CMGRRS KIA RK   + K+ KLYSRI            PNV +NS
Sbjct: 59  VRVRRRTIWTSTPLCMGRRSCKIAGRKEANNAKKMKLYSRIGKEVVSAVKKGGPNVTSNS 118

Query: 110 DLAAVLEKAKELDVPKDIIERNIKRASEKGQEAYIEKTYE-------------------- 149
            LAAVLEK KELDVPKDI+ERNIK+A+EKGQE YIEK YE                    
Sbjct: 119 ALAAVLEKVKELDVPKDIVERNIKKATEKGQEDYIEKIYEGNQLCLVNVLGYKIGYGTGP 178

Query: 150 -----VYGYGGVSIVVEVSTDKINRSVAKIREVVRDYGGKMADPGSVMFKFRRARVVNIK 204
                VYGYGGVS+VVEVSTDKI RSVAKIREV++DYGGKMAD GSV+FKFRRARVV+IK
Sbjct: 179 ATPEWVYGYGGVSMVVEVSTDKITRSVAKIREVIKDYGGKMADSGSVLFKFRRARVVSIK 238

Query: 205 VTNADKDQLLAIALDAGAEDVIXXXXXXXXXXXXXXXXXXKIVGSSENYSSILSKLREEG 264
           VTNADKD LL IALDAGAEDVI                  KIVGSSENYSSILSKLREEG
Sbjct: 239 VTNADKDHLLGIALDAGAEDVIDPPTYEDDTEEDRSERYYKIVGSSENYSSILSKLREEG 298

Query: 265 IDFVPDSGSELLPNATIEVDDEAMDLNKELMSNLLELDDVDAVYTDQK 312
           I+F PD+GSELLPN TIEVDDEAMDLNKELMS LLELDDVDAVYTDQK
Sbjct: 299 IEFEPDNGSELLPNTTIEVDDEAMDLNKELMSKLLELDDVDAVYTDQK 346


>Medtr3g109620.1 | transcriptional regulatory plant protein,
           putative | HC | chr3:51279193-51272413 | 20130731
          Length = 317

 Score =  303 bits (777), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 181/318 (56%), Positives = 203/318 (63%), Gaps = 42/318 (13%)

Query: 4   FRALLQLNTLSNL-VSSTRLT----LHLPRNNHVLNKSLLLWDATANATFTG-------- 50
            R  L L+  S   V STRL+      L RN H+++ SLL  DA     FT         
Sbjct: 2   LRVALSLHAFSTRGVFSTRLSSSSFFLLHRNIHIISPSLL--DANV-INFTNYHNDNNRR 58

Query: 51  -SSQVRKISTTSFVCMGRRSSKIARRKGTQDVKRAKLYSRIXXXXXXXXXXXXPNVATNS 109
              + R I T++ +CMGRRS KIA RK   + K+ KLYSRI            PNV +NS
Sbjct: 59  VRVRRRTIWTSTPLCMGRRSCKIAGRKEANNAKKMKLYSRIGKEVVSAVKKGGPNVTSNS 118

Query: 110 DLAAVLEKAKELDVPKDIIERNIKRASEKGQEAYIEKTYE-------------------- 149
            LAAVLEK KELDVPKDI+ERNIK+A+EKGQE YIEK YE                    
Sbjct: 119 ALAAVLEKVKELDVPKDIVERNIKKATEKGQEDYIEKIYEGNQLCLVNVLGYKIGYGTGP 178

Query: 150 -----VYGYGGVSIVVEVSTDKINRSVAKIREVVRDYGGKMADPGSVMFKFRRARVVNIK 204
                VYGYGGVS+VVEVSTDKI RSVAKIREV++DYGGKMAD GSV+FKFRRARVV+IK
Sbjct: 179 ATPEWVYGYGGVSMVVEVSTDKITRSVAKIREVIKDYGGKMADSGSVLFKFRRARVVSIK 238

Query: 205 VTNADKDQLLAIALDAGAEDVIXXXXXXXXXXXXXXXXXXKIVGSSENYSSILSKLREEG 264
           VTNADKD LL IALDAGAEDVI                  KIVGSSENYSSILSKLREEG
Sbjct: 239 VTNADKDHLLGIALDAGAEDVIDPPTYEDDTEEDRSERYYKIVGSSENYSSILSKLREEG 298

Query: 265 IDFVPDSGSELLPNATIE 282
           I+F PD+GSELLPN TIE
Sbjct: 299 IEFEPDNGSELLPNTTIE 316