Miyakogusa Predicted Gene
- Lj1g3v2067530.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2067530.1 Non Characterized Hit- tr|A5ANK5|A5ANK5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,45.35,0.00000000000006,RPE65,Carotenoid oxygenase;
9-CIS-EPOXYCAROTENOID DIOXYGENASE,NULL; BETA-CAROTENE
DIOXYGENASE,Carote,CUFF.28403.1
(588 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g110195.1 | retinal pigment epithelial membrane protein | ... 959 0.0
Medtr8g037290.1 | carotenoid 9,10(9',10')-cleavage dioxygenase |... 228 9e-60
Medtr8g037275.1 | carotenoid 9,10(9',10')-cleavage dioxygenase |... 228 1e-59
Medtr8g037315.1 | carotenoid cleavage dioxygenase | HC | chr8:13... 224 1e-58
Medtr8g037310.1 | carotenoid 9,10(9',10')-cleavage dioxygenase |... 218 2e-56
Medtr5g025270.1 | carotenoid cleavage dioxygenase 4a-6 | HC | ch... 196 8e-50
Medtr5g025250.1 | carotenoid cleavage dioxygenase 4a-6 | HC | ch... 191 1e-48
Medtr5g025230.1 | carotenoid cleavage dioxygenase 4a-6 | HC | ch... 189 9e-48
Medtr2g070460.1 | 9-cis-epoxycarotenoid dioxygenase | HC | chr2:... 180 3e-45
Medtr3g109610.1 | carotenoid cleavage dioxygenase | HC | chr3:51... 80 4e-15
Medtr7g063800.1 | carotenoid cleavage dioxygenase | HC | chr7:23... 73 8e-13
Medtr3g109610.2 | carotenoid cleavage dioxygenase | HC | chr3:51... 55 1e-07
>Medtr3g110195.1 | retinal pigment epithelial membrane protein | HC
| chr3:51201204-51196407 | 20130731
Length = 586
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/587 (78%), Positives = 512/587 (87%), Gaps = 9/587 (1%)
Query: 1 MAISYNN-AFLVNCSIHKRPLYVSNNNFGDYIIPLFSAFKPMIMKAMPEVFLQIDVPKTM 59
MAISYNN AF+VNC I K + +N IPLFS FK +PEV LQID+PKTM
Sbjct: 5 MAISYNNNAFIVNCGIQKGSRHYNN-------IPLFSIFKSNTRPTLPEVSLQIDIPKTM 57
Query: 60 KNSAAKLVDAFVDSFFEFIDKPLLPSQSNYAPVEELEEAIVMSSIQGHIPDGFPEGVYIR 119
KN+ AKL+D FVDSFFEFIDKPLLPS+SN+APVEELEEAIV++ I G IP+ FPEGVYIR
Sbjct: 58 KNTVAKLIDVFVDSFFEFIDKPLLPSKSNFAPVEELEEAIVVTCIHGRIPNDFPEGVYIR 117
Query: 120 NGPNPLFGGLKSTNSVFGRSSHIWVEGEGMLHALYFKKSSHGNWTVLYNNKHVETETYKL 179
NGPNPLFGGLKSTNS+FGRSSHIWVEGEGMLHALYFKKS+HG+WTVLYNNKHVETETYKL
Sbjct: 118 NGPNPLFGGLKSTNSIFGRSSHIWVEGEGMLHALYFKKSNHGSWTVLYNNKHVETETYKL 177
Query: 180 EKQRNKPSFLPAIEGDSPAILFAYLLNWLRFGKANKYISNTNIIEHSGKFYSVAESHIPQ 239
EKQRNKP FLPAIEG+S AIL AYL NWLR GK NKYISNTN+ EHSGKFYSVAESH+PQ
Sbjct: 178 EKQRNKPLFLPAIEGNSLAILSAYLFNWLRSGKVNKYISNTNVFEHSGKFYSVAESHMPQ 237
Query: 240 EIDIFTLKASNNWDVNGAWNRPFTSHPKKVPGTGELVTFGVASTKPFAVVGIISADGKNL 299
EIDIF+LK NNW+++ AWNRPFTSHPKK P TGELVT GV KPFAVVGIISADGK L
Sbjct: 238 EIDIFSLKTLNNWELSAAWNRPFTSHPKKAPITGELVTLGVEPIKPFAVVGIISADGKKL 297
Query: 300 IHKVDLKLNRCSLGHDIGVTERYIVIMDFPLTIDLNRLLRGGSLIKYTKEDIARIGVMPR 359
+HKVD+KLNRCSL HDIGVT+RY VIMDFPLTIDLNRLLRGG LIKY +++ ARIGVMPR
Sbjct: 298 VHKVDIKLNRCSLCHDIGVTQRYNVIMDFPLTIDLNRLLRGGQLIKYDRKEYARIGVMPR 357
Query: 360 YGNANSIKWFKVEPNCTFHIINSFEDGHEVVVRGCRALDSIIPERDPNLKEFEWLSRCYE 419
YGNANSIKWF+VEPNCTFHIINSFEDG EVVVRGCR+LDS+IPE DP+ KEFEWLSRC+E
Sbjct: 358 YGNANSIKWFEVEPNCTFHIINSFEDGDEVVVRGCRSLDSLIPEPDPSSKEFEWLSRCHE 417
Query: 420 WRLNMQTGEVKEKDLCGTTKVYMDFPMINENFIGIKNRYAYTQVVDPSSSTTRDAPKYGG 479
WRLNM TGEVKEKDLCG VYMDFPMINENF+G+K+RYAYTQVVDP+SSTT+D PKY G
Sbjct: 418 WRLNMLTGEVKEKDLCGNKLVYMDFPMINENFVGVKHRYAYTQVVDPTSSTTQDVPKYRG 477
Query: 480 LAKLYFGESCAKFSTRDTKQPEEPIKVEYHMFEKNVFCSGAAFVPKDGGVEEDDGWVITF 539
+AKLY E+CA+FS ++ EEPI++EYHMFEKN FC+GAAFVP+DGGVEEDDG +ITF
Sbjct: 478 IAKLYLEETCAEFSM-SKREKEEPIRMEYHMFEKNTFCNGAAFVPRDGGVEEDDGLIITF 536
Query: 540 VHNEDTNTSEVRVIDTKKFSSEPVAKITLPCRVPYGFHGAFMSISFK 586
VHNEDTNTS+V +IDTK FS E VAKI +P RVPYGFHGAFM ISF+
Sbjct: 537 VHNEDTNTSQVHIIDTKNFSGETVAKIEIPFRVPYGFHGAFMPISFQ 583
>Medtr8g037290.1 | carotenoid 9,10(9',10')-cleavage dioxygenase | HC
| chr8:13873459-13869022 | 20130731
Length = 575
Score = 228 bits (582), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 262/548 (47%), Gaps = 55/548 (10%)
Query: 56 PKTMKNSAAKLVDAFVDSFFEFIDKPLLPSQ---SNYAPVEELEEAIVMSSIQGHIPDGF 112
PK K +K VD + +F L N+APV++ ++GH+PD
Sbjct: 52 PKPRKCFTSKAVDLLENLVVKFFYDSSLSHHWIAGNFAPVKDETPPTKDLPVKGHLPDCL 111
Query: 113 PEGVYIRNGPNPLFGGLKSTNSVFGRSSHIWVEGEGMLHALYFKKSSHGNWTVLYNNKHV 172
G ++R GPNP F + + + W +G+GM+H L K + Y + V
Sbjct: 112 -NGEFVRVGPNPKFSPV---------AGYHWFDGDGMIHGLRIK-----DGKATYVSHFV 156
Query: 173 ETETYKLEKQRNKPSFLPAIEGDSPAILFAYLLNWLRFGKANKYI--------SNTNIIE 224
T K E+ F+ GD +L ++ + K + +NT ++
Sbjct: 157 RTSRLKQEEYFGGCKFMKI--GDVKGLLGLLMVTIQTLREKLKILDVSYGTGTANTGLVY 214
Query: 225 HSGKFYSVAESHIPQEIDIF---TLKASNNWDVNGAWNRPFTSHPKKVPGTGELVTFGVA 281
H+GK +++E P I +F L D + + FTSHPK P TGE+ TFG A
Sbjct: 215 HNGKLLALSERDKPYAIKVFEDGDLHTLGILDYDKRLDHYFTSHPKLDPYTGEMFTFGYA 274
Query: 282 STKPFAVVGIISADGKNLIHKVDLKLNRCSLGHDIGVTERYIVIMDFPLTIDLNRLLRGG 341
T P+ +IS DG + V + ++ + HD +TE Y + MD P+ +++
Sbjct: 275 QTPPYITYRVISKDG-YMYDPVPITISDPIMVHDFAITENYAIFMDLPVYFRPKEMVKNN 333
Query: 342 SLI-KYTKEDIARIGVMPRYGNANS-IKWFKVEPNC-TFHIINSFEDGHEVVVRGCRA-- 396
LI + AR GV+PRY + I+WF++ PNC FH N++E+ EVV+ CR
Sbjct: 334 KLIFSFDSTKKARFGVLPRYAKDDKLIRWFEL-PNCFIFHNANAWEEEDEVVMITCRLKN 392
Query: 397 LDSIIPERDPNLKEFEWLSRCYEWRLNMQTGEVKEKDLCGTTKVYMDFPMINENFIGIKN 456
LD + D K + + YE R NM+TG+ +K L + +DFP +NE + G K
Sbjct: 393 LDLDMVSEDVKDKLESFSNELYEMRFNMKTGKASQKKLSAFS---IDFPRVNERYTGRKQ 449
Query: 457 RYAYTQVVDPSSSTTRDAPKYGGLAKLYFGESCAKFSTRDTKQPEEPIKVEYHMFEKNVF 516
+Y Y ++D S T K+ AK FG++ + + Y + + F
Sbjct: 450 KYVYGTILD---SITTGIVKFDLSAKPDFGKTKLEVGGN--------VHGIYDL-GRGTF 497
Query: 517 CSGAAFVPKDGGV--EEDDGWVITFVHNEDTNTSEVRVIDTKKFSSEPVAKITLPCRVPY 574
CS +VP+ G EEDDG++I FVH+E+ S V VID K S++PVA + LP RVPY
Sbjct: 498 CSDPIYVPRVPGTDSEEDDGYLIFFVHDENIRKSFVHVIDAKTMSADPVAVVELPQRVPY 557
Query: 575 GFHGAFMS 582
GFH F++
Sbjct: 558 GFHAFFLT 565
>Medtr8g037275.1 | carotenoid 9,10(9',10')-cleavage dioxygenase | HC
| chr8:13854442-13849769 | 20130731
Length = 575
Score = 228 bits (582), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 169/546 (30%), Positives = 263/546 (48%), Gaps = 56/546 (10%)
Query: 57 KTMKNSAAKLVDAFVDSFFEFIDKPLLPS--QSNYAPVEELEEAIVMSSIQGHIPDGFPE 114
K + A L++ V FF D L N+APV++ I ++GH+PD
Sbjct: 56 KCFSSKAVDLLEKLVVKFF--YDSSLCHHWLAGNFAPVQDETPPIKDLPVKGHLPDCL-N 112
Query: 115 GVYIRNGPNPLFGGLKSTNSVFGRSSHIWVEGEGMLHALYFKKSSHGNWTVLYNNKHVET 174
G ++R GPNP F + + + W +G+GM+H L K + Y + V T
Sbjct: 113 GEFVRVGPNPKFSPV---------AGYHWFDGDGMIHGLRIK-----DGKATYVSHFVRT 158
Query: 175 ETYKLEKQRNKPSFLPAIEGDSPAILFAYLLNWLRFGKANKYI--------SNTNIIEHS 226
K E+ F+ GD +L ++ + K + +NT ++ H+
Sbjct: 159 SRLKQEEYFGGCKFMKI--GDVKGLLGLLMVTIQTLREKLKILDVSYGTGTANTGLVYHN 216
Query: 227 GKFYSVAESHIPQEIDIF---TLKASNNWDVNGAWNRPFTSHPKKVPGTGELVTFGVAST 283
GK +++E P I +F L D + FT+HPK P TGE+ TFG + T
Sbjct: 217 GKLLALSERDKPYAIKVFEDGDLHTLGMLDYEKRLDHYFTAHPKVDPFTGEMFTFGYSQT 276
Query: 284 KPFAVVGIISADGKNLIHKVDLKLNRCSLGHDIGVTERYIVIMDFPLTIDLNRLLRGGSL 343
P+ +IS DG + V + ++ + HD +TE Y + MD P+ +++ L
Sbjct: 277 PPYITYRVISKDG-YMYDPVPITISDPIMVHDFAITENYAIFMDLPVYFRPKEMVKNNKL 335
Query: 344 I-KYTKEDIARIGVMPRYGNANS-IKWFKVEPNC-TFHIINSFEDGHEVVVRGCRA--LD 398
I + AR GV+PRY + I+WF++ PNC FH N++E+ +VV+ CR LD
Sbjct: 336 IFSFDSTKKARFGVLPRYAKDDKLIRWFEL-PNCFIFHNANAWEEEDQVVLITCRLNNLD 394
Query: 399 SIIPERDPNLKEFEWLSRCYEWRLNMQTGEVKEKDLCGTTKVYMDFPMINENFIGIKNRY 458
+ D K + ++ YE R NM+TG+ +K L + +DFP +NE + G K +Y
Sbjct: 395 LDMVSEDVKDKLESFSTQLYEMRFNMKTGKASQKKLSAFS---VDFPRVNERYTGRKQKY 451
Query: 459 AYTQVVDPSSSTTRDAPKYGGLAKLYFGESCAKFSTRDTKQPEEPIKVEYHMFEKNVFCS 518
Y ++D S K+ AK FG++ + + Y + + FCS
Sbjct: 452 VYGTILD---SIPTGIVKFDLSAKPDFGKTKLEIGGN--------VHGIYDL-GQGTFCS 499
Query: 519 GAAFVPKDGGVE--EDDGWVITFVHNEDTNTSEVRVIDTKKFSSEPVAKITLPCRVPYGF 576
+VP+ G + EDDG++I FVH+E+T S V VID K S++PVA + LP RVPYGF
Sbjct: 500 DPIYVPRVPGTDSDEDDGYLIFFVHDENTRKSFVHVIDAKTMSADPVAVVELPQRVPYGF 559
Query: 577 HGAFMS 582
H FM+
Sbjct: 560 HSFFMT 565
>Medtr8g037315.1 | carotenoid cleavage dioxygenase | HC |
chr8:13903093-13896651 | 20130731
Length = 540
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 173/552 (31%), Positives = 263/552 (47%), Gaps = 61/552 (11%)
Query: 56 PKTMKNSAAKLVDAFVDSFFEFIDKPLLPSQ---SNYAPVEELEEAIVMSSIQGHIPDGF 112
PK +K VD + LP N+APV++ I I+GH+PD
Sbjct: 15 PKPSNGFTSKAVDLLEKIIVKLFYDSSLPHHWLAGNFAPVKDETPPIKDLPIKGHLPDCL 74
Query: 113 PEGVYIRNGPNPLFGGLKSTNSVFGRSSHIWVEGEGMLHALYFKKSSHGNWTVLYNNKHV 172
G ++R GPN F + + + W +G+GM+H L K + Y ++ V
Sbjct: 75 -NGEFVRVGPNSKFAPV---------AGYHWFDGDGMIHGLRIK-----DGKATYVSRFV 119
Query: 173 ETETYKLEKQRNKPSFLPAIEGDSPAILFAYLLNWLRFGKANKYI---------SNTNII 223
+T K E+ F+ GD LF L+ ++ +A + +NT ++
Sbjct: 120 KTSRLKQEEYFGGSKFMKI--GDMKG-LFGLLMVNMQMLRAKLKVVDVSYGHGTANTALV 176
Query: 224 EHSGKFYSVAESHIPQEIDIFT---LKASNNWDVNGAWNRPFTSHPKKVPGTGELVTFGV 280
H K +++E P I +F L+ D + FT+HPK P TGE+ TFG
Sbjct: 177 YHHQKLLALSEGDKPYAIKVFEDGDLQTLGMLDYDKRLGHNFTAHPKVDPFTGEMFTFGY 236
Query: 281 ASTKPFAVVGIISADGKNLIHK-VDLKLNRCSLGHDIGVTERYIVIMDFPLTIDLNRLLR 339
+ T P+ +IS DG +H V + ++ + HD +TE Y + MD PL +++
Sbjct: 237 SHTPPYITYRVISKDG--FMHDPVPITISEPIMMHDFAITENYSIFMDLPLYFRPKEMVK 294
Query: 340 GGSLI-KYTKEDIARIGVMPRYG-NANSIKWFKVEPNC-TFHIINSFEDGHEVVVRGCRA 396
+LI + AR GV+PRY + I+WF++ PNC FH N++E+ E+V+ CR
Sbjct: 295 NKTLIFSFDSTKKARFGVLPRYAKDEKHIRWFEL-PNCFIFHNANAWEEEDEIVLITCRL 353
Query: 397 ----LDSIIPERDPNLKEFEWLSRCYEWRLNMQTGEVKEKDLCGTTKVYMDFPMINENFI 452
LD + L F + YE R NM+TGE +K L + +DFP +NE++
Sbjct: 354 ENPNLDMVGGAVKEKLDNFA--NELYEMRFNMKTGEASQKKLSASA---VDFPRVNESYT 408
Query: 453 GIKNRYAYTQVVDPSSSTTRDAPKYGGLAKLYFGESCAKFSTRDTKQPEEPIKVEYHMFE 512
G K RY Y +D + T G+ K + AK + TK V ++
Sbjct: 409 GRKQRYVYGTELDSIAKVT-------GIVKF---DLHAKPDSGKTKLEVGGNVVGHYDLG 458
Query: 513 KNVFCSGAAFVPKDGGV--EEDDGWVITFVHNEDTNTSEVRVIDTKKFSSEPVAKITLPC 570
F S A +VP+ G EEDDG++I FVH+E+T S V V+D K S++PVA + LP
Sbjct: 459 PGRFGSEAVYVPRVPGTDSEEDDGYLIFFVHDENTGKSFVHVLDAKTMSADPVAVVELPQ 518
Query: 571 RVPYGFHGAFMS 582
RVPYGFH F++
Sbjct: 519 RVPYGFHAFFVT 530
>Medtr8g037310.1 | carotenoid 9,10(9',10')-cleavage dioxygenase | HC
| chr8:13895762-13890670 | 20130731
Length = 575
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/551 (29%), Positives = 262/551 (47%), Gaps = 61/551 (11%)
Query: 56 PKTMKNSAAKLVDAFVDSFFEFIDKPLLPSQ---SNYAPVEELEEAIVMSSIQGHIPDGF 112
PK K ++K VD + LP N+APV++ ++G++PD
Sbjct: 52 PKPRKCFSSKAVDLLEKLVVKLFYDSSLPHHWLAGNFAPVKDETPPTKDLPVKGYLPDCL 111
Query: 113 PEGVYIRNGPNPLFGGLKSTNSVFGRSSHIWVEGEGMLHALYFKKSSHGNWTVLYNNKHV 172
G ++R GPNP F + + + W +G+GM+H L K + Y ++ V
Sbjct: 112 -NGEFVRVGPNPKFSPV---------AGYHWFDGDGMIHGLRIK-----DGKATYVSRFV 156
Query: 173 ETETYKLEKQRNKPSFLPAIEGDSPAILFAYLLNWLRFGKANKYI--------SNTNIIE 224
T K E+ F+ GD +L ++ + K + +NT ++
Sbjct: 157 RTSRLKQEEYFGGSKFMKV--GDIKGLLGVLMVTIQILREKLKILDVSYGTGTANTGLVY 214
Query: 225 HSGKFYSVAESHIPQEIDIF---TLKASNNWDVNGAWNRPFTSHPKKVPGTGELVTFGVA 281
H+ +++E P I +F L D + + FT+HPK P TG++ TFG +
Sbjct: 215 HNAMLLALSERDKPYAIKVFEDGDLHTLGMLDYDKRLDHYFTAHPKVDPFTGDMFTFGYS 274
Query: 282 STKPFAVVGIISADGKNLIHK-VDLKLNRCSLGHDIGVTERYIVIMDFPLTIDLNRLLRG 340
T P+ +IS DG +H V + ++ + HD +TE Y + MD P+ +++
Sbjct: 275 QTPPYITYRVISKDG--YMHDPVPITISNPIMVHDFAITENYAIFMDLPVYFRPKEMVKN 332
Query: 341 GSLI-KYTKEDIARIGVMPRYGNANS-IKWFKVEPNC-TFHIINSFEDGHEVVVRGCRA- 396
L+ + AR GV+PRY + I+WF++ PNC FH N++E+ EVV+ CR
Sbjct: 333 KRLVFSFDSTKKARFGVLPRYAKDDKHIRWFEL-PNCFIFHNANAWEEEDEVVLITCRLK 391
Query: 397 ---LDSIIPERDPNLKEFEWLSRCYEWRLNMQTGEVKEKDLCGTTKVYMDFPMINENFIG 453
LD + + LK F + YE R NM+TG+ +K L + +DFP +NE + G
Sbjct: 392 NLDLDMVAEDIKDKLKNFS--NELYEMRFNMKTGKAAQKKLSTYS---VDFPRVNERYTG 446
Query: 454 IKNRYAYTQVVDPSSSTTRDAPKYGGLAKLYFGESCAKFSTRDTKQPEEPIKVEYHMFEK 513
K +Y Y ++ S K+ A+ FG++ + I Y +
Sbjct: 447 RKQKYVYGTIL---GSNATGIIKFDLNAEPNFGKTKLEVGGN--------IHGLYDL-GP 494
Query: 514 NVFCSGAAFVPKDGGVE--EDDGWVITFVHNEDTNTSEVRVIDTKKFSSEPVAKITLPCR 571
FCS A +VP+ G + EDDG++I FVH+E+T S V VID K S++PVA + LP R
Sbjct: 495 GTFCSDAIYVPRVPGTDSDEDDGYLIFFVHDENTRKSSVHVIDAKTMSADPVAVVELPQR 554
Query: 572 VPYGFHGAFMS 582
VPYGFH F++
Sbjct: 555 VPYGFHAFFVT 565
>Medtr5g025270.1 | carotenoid cleavage dioxygenase 4a-6 | HC |
chr5:10254367-10256492 | 20130731
Length = 581
Score = 196 bits (497), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 157/540 (29%), Positives = 251/540 (46%), Gaps = 66/540 (12%)
Query: 64 AKLVDAFVDSFFEFIDKPLLPS-------QSNYAPVEELEEAIVMSSIQGHIPDGFPEGV 116
A L + F D FID P+ PS N+APV + I+G +P GV
Sbjct: 75 ALLFNTFDDIINTFIDPPIKPSVDPRHVLSQNFAPVLDELPPTQCKVIKGTLPPSL-NGV 133
Query: 117 YIRNGPNPLFGGLKSTNSVFGRSSHIWVEGEGMLHALYFKKSSHGNWTVLYNNKHVETET 176
YIRNGPNP F R + +G+GMLHA+ S+G T+ +++V+T
Sbjct: 134 YIRNGPNPQF---------LPRGPYHLFDGDGMLHAITI---SNGKATLC--SRYVQTYK 179
Query: 177 YKLEKQRNK-------PSFLPAIEGDSPAILFAYLLNWLRFGKANKY-ISNTNIIEHSGK 228
YK+E + F I + + A + ++ +N ++NT++ K
Sbjct: 180 YKIENEAGYQLIPNVFSGFNSLIASAARGSVTAARVISGQYNPSNGIGLANTSLALFGNK 239
Query: 229 FYSVAESHIPQEIDIF---TLKASNNWDVNGAWNRPFTSHPKKVPGTGELVTFGVASTKP 285
+++ ES +P EI++ ++ +D NG + T+HPK TGE F P
Sbjct: 240 LFALGESDLPYEINLTPNGDIQTIGRYDFNGKLSMSMTAHPKIDGDTGETFAFRYGPMPP 299
Query: 286 FAVVGIISADGKNLIHKVDLKLNRCSLGHDIGVTERYIVIMDFPLTIDLNRLLRGGSLIK 345
F A+G + R S HD +T++Y V D L ++ ++ GGS +
Sbjct: 300 FLTYFRFDANGVKHNDVPVFSMTRPSFLHDFAITKKYAVFTDIQLGMNPLDMISGGSPVG 359
Query: 346 YTKEDIARIGVMPRYGNANS-IKWFKVEPNCTFHIINSF--EDGHEVVVRGCRALDSIIP 402
++RIG++PRY + S +KWF V H INS+ ED E V + SI
Sbjct: 360 SDPSKVSRIGILPRYASDESKMKWFDVPGFNIMHAINSWDGEDDEETVTLIAPNVLSI-- 417
Query: 403 ERDPNLKEFEWLSRCYE-WRLNMQTGEVKEKDLCGTTKVYMDFPMINENFIGIKNRYAYT 461
+ ++ E + E ++N++TG V + L +DF +IN +++G KNR+ Y
Sbjct: 418 --EHTMERLELVHAMIEKVKINIKTGIVSRQPLSARN---LDFAVINGDYMGKKNRFVYA 472
Query: 462 QVVDPSSSTTRDAPKYGGLAKLYFGESCAKFSTRDTKQPEEPIKVEYHMFEKNVFCSGAA 521
+ +P PK G+ K+ D + EE V ++ + +
Sbjct: 473 AIGNP-------MPKISGVVKI------------DVLKGEE---VGCRLYGEGCYGGEPF 510
Query: 522 FVPKDGGVEEDDGWVITFVHNEDTNTSEVRVIDTKKFSSEPVAKITLPCRVPYGFHGAFM 581
FV ++ G EEDDG+++++VH+E S+ V+D K E VA++ LP RVPYGFHG F+
Sbjct: 511 FVAREDGEEEDDGYLVSYVHDEKKGESKFLVMDAKSPEFEIVAEVKLPRRVPYGFHGLFV 570
>Medtr5g025250.1 | carotenoid cleavage dioxygenase 4a-6 | HC |
chr5:10240138-10238399 | 20130731
Length = 579
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 155/552 (28%), Positives = 255/552 (46%), Gaps = 69/552 (12%)
Query: 57 KTMKNSA--AKLVDAFVDSFFEFIDKPLLPS-------QSNYAPVEELEEAIVMSSIQGH 107
KT++ S+ A +++ D FID P+ PS N+APV + I+G
Sbjct: 65 KTLQTSSISALILNTLDDIINTFIDPPIKPSVDPRHVLSQNFAPVLDELPPTQCKVIKGT 124
Query: 108 IPDGFPEGVYIRNGPNPLFGGLKSTNSVFGRSSHIWVEGEGMLHALYFKKSSHGNWTVLY 167
+P GVYIRNGPNP F R + +G+GMLHA+ K ++G T+
Sbjct: 125 LPPSL-NGVYIRNGPNPQF---------LPRGPYHLFDGDGMLHAV---KITNGKATLC- 170
Query: 168 NNKHVETETYKLEKQRNKPSFLPAIEGDSPAILFA----YLLNWLRFGKANKY----ISN 219
+++V+T YK+E + G + I A + + G+ N + N
Sbjct: 171 -SRYVQTYKYKIENEAGYQILPNVFSGFNSLIGLAARGSVAVARVLTGQYNPINGIGLIN 229
Query: 220 TNIIEHSGKFYSVAESHIPQEIDIF---TLKASNNWDVNGAWNRPFTSHPKKVPGTGELV 276
T++ + +++ ES +P EI + ++ +D NG T+HPK TGE
Sbjct: 230 TSLALFGNRLFALGESDLPYEIKVTPNGDIQTIGRYDFNGKLFMNMTAHPKIDSDTGECF 289
Query: 277 TFGVASTKPFAVVGIISADGKNLIHKVDLKLNRCSLGHDIGVTERYIVIMDFPLTIDLNR 336
+ +PF ++G + R S HD +T++Y + D L I+
Sbjct: 290 AYRYGLIRPFLTYFRFDSNGVKHNDVPVFSMKRPSFLHDFAITKKYALFADIQLEINPLD 349
Query: 337 LLRGGSLIKYTKEDIARIGVMPRYG-NANSIKWFKVEPNCTFHIINSF--EDGHEVVVRG 393
++ GGS ++ + RIG++PRY N + +KWF V H+IN++ EDG V +
Sbjct: 350 MIFGGSPVRSDPSKVPRIGILPRYADNESKMKWFDVPGLNIMHLINAWDEEDGKTVTIVA 409
Query: 394 CRALDSIIPERDPNLKEFEWLSRCYE-WRLNMQTGEVKEKDLCGTTKVYMDFPMINENFI 452
L + ++ E + E R+N++TG V + L +D +IN F+
Sbjct: 410 PNILCV-----EHMMERLELIHEMIEKVRINVETGIVTRQPLSARN---LDLAVINNEFL 461
Query: 453 GIKNRYAYTQVVDPSSSTTRDAPKYGGLAKLYFGESCAKFSTRDTKQPEEPIKVEYHMFE 512
G K+R+ Y + +P PK+ G+ K+ D + EE V ++
Sbjct: 462 GKKHRFIYAAIGNP-------MPKFSGVVKI------------DVLKGEE---VGCRLYG 499
Query: 513 KNVFCSGAAFVPKDGGVEEDDGWVITFVHNEDTNTSEVRVIDTKKFSSEPVAKITLPCRV 572
++ + FV ++ G EEDDG+++++VH+E S V+D K E VA++ LP RV
Sbjct: 500 EDCYGGEPFFVAREDGEEEDDGYLVSYVHDEKKGESRFLVMDAKSPEFEIVAEVKLPRRV 559
Query: 573 PYGFHGAFMSIS 584
PYGFHG F+ S
Sbjct: 560 PYGFHGLFVKES 571
>Medtr5g025230.1 | carotenoid cleavage dioxygenase 4a-6 | HC |
chr5:10231380-10229377 | 20130731
Length = 578
Score = 189 bits (479), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 151/544 (27%), Positives = 248/544 (45%), Gaps = 67/544 (12%)
Query: 63 AAKLVDAFVDSFFEFIDKPLLPS-------QSNYAPVEELEEAIVMSSIQGHIPDGFPEG 115
+A +++ D FID P+ PS N+APV + I+G +P G
Sbjct: 72 SALILNTLDDIINTFIDPPIKPSVDPRHVLSQNFAPVLDELPPTQCVIIKGTLPPSL-YG 130
Query: 116 VYIRNGPNPLFGGLKSTNSVFGRSSHIWVEGEGMLHALYFKKSSHGNWTVLYNNKHVETE 175
YIRNGPNP F R + +G+GMLHA+ S+G T+ +++V+T
Sbjct: 131 AYIRNGPNPQF---------LPRGPYHLFDGDGMLHAITI---SNGKATLC--SRYVKTY 176
Query: 176 TYKLEKQRNKPSFLPAIEGDSPAILFA----YLLNWLRFGKANKY----ISNTNIIEHSG 227
YK+E + G + I A ++ + G+ N + NT++
Sbjct: 177 KYKIENKAGHQLIPNVFSGFNSLIALAARGSVVVARVLTGQYNPSNGIGLVNTSLALFGN 236
Query: 228 KFYSVAESHIPQEIDIF---TLKASNNWDVNGAWNRPFTSHPKKVPGTGELVTFGVASTK 284
+ +++ ES +P E+ + ++ +D NG T+HPK T E F +
Sbjct: 237 RLFALGESDLPYEVKLTPNGDIQTMGRYDFNGKLLMSMTAHPKIDSDTSECFAFRYGPIR 296
Query: 285 PFAVVGIISADGKNLIHKVDLKLNRCSLGHDIGVTERYIVIMDFPLTIDLNRLLRGGSLI 344
PF ++G + R S HD +T++Y V D L ++ ++ GGS +
Sbjct: 297 PFLTYFRFDSNGVKHNDVPVFSMKRPSFLHDFAITKKYAVFADIQLEMNPLGMIFGGSPV 356
Query: 345 KYTKEDIARIGVMPRYGNANS-IKWFKVEPNCTFHIINSF--EDGHEVVVRGCRALDSII 401
+ ++RIG++PRY N S +KWF V H IN++ EDG V + L
Sbjct: 357 RSDPSKVSRIGILPRYANDESKMKWFDVPGFNIMHTINAWDEEDGGTVTLVATNILSV-- 414
Query: 402 PERDPNLKEFEWLSRCYE-WRLNMQTGEVKEKDLCGTTKVYMDFPMINENFIGIKNRYAY 460
++ + + E R+N++TG V + L +D +IN +F+G K+R+ Y
Sbjct: 415 ---QHVMERMDLIHAMIEKVRINVETGLVTRQPLSARN---LDLAVINNDFLGKKSRFVY 468
Query: 461 TQVVDPSSSTTRDAPKYGGLAKLYFGESCAKFSTRDTKQPEEPIKVEYHMFEKNVFCSGA 520
+ +P PK+ G+ K+ D + EE V ++ + +
Sbjct: 469 AAIGNP-------MPKFSGVVKI------------DVLKGEE---VGCRLYGEGCYGGEP 506
Query: 521 AFVPKDGGVEEDDGWVITFVHNEDTNTSEVRVIDTKKFSSEPVAKITLPCRVPYGFHGAF 580
FV +GG EEDDG+++++VH+E S+ V+D K E VA++ LP RVPYGFHG F
Sbjct: 507 FFVAMEGGEEEDDGYLVSYVHDEKKGESKFLVMDAKSPEFEIVAEVKLPRRVPYGFHGLF 566
Query: 581 MSIS 584
+ S
Sbjct: 567 VKQS 570
>Medtr2g070460.1 | 9-cis-epoxycarotenoid dioxygenase | HC |
chr2:29673292-29670860 | 20130731
Length = 610
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 161/559 (28%), Positives = 262/559 (46%), Gaps = 92/559 (16%)
Query: 59 MKNSAAKLVDAFVDSFFEFIDKPLLPSQS--------NYAPVEELEEAIVMS-SIQGHIP 109
++ +AA +D + + K LP S N+APV E + S I G IP
Sbjct: 101 LQKAAATALDFVETTLIKQEQKHPLPKTSDPRVQIAGNFAPVPE--HPVTQSLPITGKIP 158
Query: 110 DGFPEGVYIRNGPNPLFGGLKSTNSVFGRSSHIWVEGEGMLHALYFKKSSHGNWTVLYNN 169
+GVY+RNG NPL+ + + H + +G+GM+HA+ F N +V Y+
Sbjct: 159 TNI-DGVYLRNGANPLYEPV---------AGHHFFDGDGMVHAVKFT-----NGSVSYSC 203
Query: 170 KHVETETYKLEKQRNKPSFLPAI---EGDSP----AILFAYLLNWLRFGKANKYISNTNI 222
+ ET EK +P F AI G S A+ +A L L G ++N +
Sbjct: 204 RFTETHRLAQEKALGRPVFPKAIGELHGHSGIARLALYYARSLCGLVDGTHGMGVANAGL 263
Query: 223 IEHSGKFYSVAESHIPQEIDIF---TLKASNNWDVNGAWNRPFTSHPKKVPGTGEL--VT 277
+ + + +++E IP I + L +D + +HPK P + ++
Sbjct: 264 VYFNNRLLAMSEDDIPYHIRVTPNGDLTTVCRYDFDNQLKSTMIAHPKVDPVDKNMYALS 323
Query: 278 FGVASTKP------FAVVGIISADGKNLIHKVDLKLNRCSLGHDIGVTERYIVIMDFPLT 331
+ V KP F G+ S D V++ L + ++ HD +TE ++V+ D +
Sbjct: 324 YDVVQ-KPYLKYFRFDASGVKSPD-------VEIPLEQPTMMHDFAITENFVVVPDQQVV 375
Query: 332 IDLNRLLRGGSLIKYTKEDIARIGVMPRYGNANSIKWFKVEPNC-TFHIINSFE--DGHE 388
L ++RGGS + Y KE ++R GV+ + +S + P C FH+ N++E + E
Sbjct: 376 FKLGEMIRGGSPVVYDKEKVSRFGVLSKNAEDSSEMIWIDAPECFCFHLWNAWEEPENDE 435
Query: 389 VVVRG-CRA-LDSIIPERDPNLKEFEWLSRCYEWRLNMQTGEVKEKDLCG-TTKVYMDFP 445
VVV G C DSI E + NL+ S E RLN++TG+ + + + +V ++
Sbjct: 436 VVVIGSCMTPADSIFNECEENLE-----SVLSEIRLNLKTGKSTRRPIIKESEQVNLEAG 490
Query: 446 MINENFIGIKNRYAYTQVVDPSSSTTRDAPKYGGLAK--LYFGESCAKFSTRDTKQPEEP 503
M+N+N +G K ++AY + +P PK G AK L+ GE
Sbjct: 491 MVNKNKLGRKTQFAYLALAEP-------WPKVSGFAKVDLFSGE---------------- 527
Query: 504 IKVEYHMFEKNVFCSGAAFVPKDGGVEEDDGWVITFVHNEDTNTSEVRVIDTKKFSSEPV 563
V+ +++ +N F F+P EDDG+++TFVH+E SE+++++ E
Sbjct: 528 --VKKYIYGENRFGGEPLFLPNSDSENEDDGYILTFVHDEKEWKSELQIVNAATLKLE-- 583
Query: 564 AKITLPCRVPYGFHGAFMS 582
A I LP RVPYGFHG F++
Sbjct: 584 ASIQLPSRVPYGFHGTFIN 602
>Medtr3g109610.1 | carotenoid cleavage dioxygenase | HC |
chr3:51268479-51271917 | 20130731
Length = 565
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 203/508 (39%), Gaps = 74/508 (14%)
Query: 104 IQGHIPDGFPEGVYIRNGPNPLFGGLKSTNSVFGRSSHIWVEGEGMLHALYFKKSSHGNW 163
+QGHIP +G YIRNGP G + +F +G L L+F+
Sbjct: 99 VQGHIPLWL-KGTYIRNGPGMWNIGDYNFRHLF--------DGYATLVGLHFEDGR---- 145
Query: 164 TVLYNNKHVETETYKLEKQRNKPSFLPAIEGDSPAILFAYL--LNWLRFGKANKYISNTN 221
++ ++ VE++ Y+ K+ K + E AY+ L L G + +NT
Sbjct: 146 -LVAGHRQVESQAYQAAKKNQKICYREFSEVPKAENFLAYVGELANLFSGSSLTDNANTG 204
Query: 222 IIE-HSGKFYSVAESHIPQ-EIDIFTLKASNNWDVNGAWNRPF-TSHPKKVPGTGELVTF 278
+++ G+ + E+ ID TL+ +D + + ++HP + E +T
Sbjct: 205 VVKLGDGRVVCLTETQKGSIVIDPDTLETIGKFDYSDSLGGLIHSAHP--IVTDNEFLTL 262
Query: 279 GVASTKPFAVVGII--SADGKNLIHKVDLKLNRCSLG--HDIGVTERYIVIMDFPLTIDL 334
KP +V + ++ + +I +VD + S G H VTE Y+++ + PL
Sbjct: 263 IPDLVKPGYLVARMEPGSNERKVIGRVDCR-GGTSPGWVHSFPVTEHYVIVPEMPLRYCA 321
Query: 335 NRLLRGGSL----IKYTKEDIARIGVMPRYGNANSIKWFKVEPNCTFHIINSFEDGHE-- 388
LLR ++ E A + VM + + + +V TFH IN++E+ E
Sbjct: 322 QNLLRAEPTPLYKFQWHPESKAFMHVMCKT-SGKIVASVEVPLFVTFHFINAYEEEDEDG 380
Query: 389 ----VVVRGCRA---LDSIIPERDPNLKEFEWL-----SRCYEWRLNMQTGEVKEKDLCG 436
V+ C D + R NL+ F +R +R+ + D
Sbjct: 381 RVTAVIADCCEHNSNTDILDKLRLQNLRSFNGEDVLPDARVGRFRIPLDGSPYGTLDAAL 440
Query: 437 TTKVY---MDFPMINENFIGIKNRYAYTQVVDPSSSTTRDAPKYGGLAKLYFGESCAKFS 493
+ MD IN N++G+K RYAY + R L K+ AK
Sbjct: 441 DPNEHGKGMDMCSINPNYLGLKYRYAY------ACGAQRPCNFPNTLTKIDLQSERAKNW 494
Query: 494 TRDTKQPEEPIKVEYHMFEKNVFCSGAAFVPKDGGVEEDDGWVITFVHNEDTNTSEVRVI 553
+ P EP FVP+ G +EDDG VI+ + +E V+
Sbjct: 495 YEEGAVPSEPF-----------------FVPRPGATKEDDGVVISII-SEKNGEGYALVL 536
Query: 554 DTKKFSSEPVAKITLPCRVPYGFHGAFM 581
D F E +A+ P +PYG HG ++
Sbjct: 537 DGSTF--EEIARAKFPYGLPYGLHGCWV 562
>Medtr7g063800.1 | carotenoid cleavage dioxygenase | HC |
chr7:23306587-23309717 | 20130731
Length = 565
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 120/508 (23%), Positives = 202/508 (39%), Gaps = 74/508 (14%)
Query: 104 IQGHIPDGFPEGVYIRNGPNPLFGGLKSTNSVFGRSSHIWVEGEGMLHALYFKKSSHGNW 163
+QGHIP +G Y+RNGP G + +F +G L L+F+
Sbjct: 99 VQGHIPLWL-KGTYLRNGPGMWNIGDYNFRHLF--------DGYATLVGLHFEDGR---- 145
Query: 164 TVLYNNKHVETETYKLEKQRNKPSFLPAIEGDSPAILFAYL--LNWLRFGKANKYISNTN 221
++ ++ VE++ Y+ + K + E AY+ L L G + +NT
Sbjct: 146 -LIAGHRQVESQAYQAAMKNQKICYREFSEVPKAENFLAYVGELASLFSGSSLTDNANTG 204
Query: 222 IIE-HSGKFYSVAESHIPQ-EIDIFTLKASNNWDVNGAWNRPF-TSHPKKVPGTGELVTF 278
+++ G+ + E+ ID TL+ ++ + + ++HP + E +T
Sbjct: 205 VVKLGDGRVVCLTETQKGSIVIDPDTLETIGKFEYSDSLGGLIHSAHP--IVTDKEFLTL 262
Query: 279 GVASTKPFAVVGII--SADGKNLIHKVDLKLNRCSLG--HDIGVTERYIVIMDFPLTIDL 334
KP +V + ++ + +I +VD + S G H VT+ Y+++ + PL
Sbjct: 263 IPDLIKPGYMVARMEPGSNERKVIGRVDCRAG-TSPGWVHSFPVTQHYVIVPEMPLRYCA 321
Query: 335 NRLLRGGSL----IKYTKEDIARIGVMPRYGNANSIKWFKVEPNCTFHIINSFEDGHE-- 388
LLR ++ E A + VM + + + V TFH IN++E+ E
Sbjct: 322 QNLLRAEPTPLYKFQWHPESKAFMHVMCKT-SGKIVASVNVPLFVTFHFINAYEEEDEDG 380
Query: 389 ---VVVRGCRALDSIIPERD----PNLKEFEWL-----SRCYEWRLNMQT---GEVKEKD 433
V+ C +S D NL+ F +R +R+ + G ++ +
Sbjct: 381 RVTAVIADCCEHNSNTDILDKLKLQNLRSFNGKDVLPDARVGRFRIPLDGSPYGTLEAEL 440
Query: 434 LCGTTKVYMDFPMINENFIGIKNRYAYTQVVDPSSSTTRDAPKYGGLAKLYFGESCAKFS 493
MD IN N++G+K RYAY + R L K+ AK
Sbjct: 441 DPNEHGKGMDMCSINPNYLGLKYRYAY------ACGAQRPCNFPNTLTKIDLQSERAKNW 494
Query: 494 TRDTKQPEEPIKVEYHMFEKNVFCSGAAFVPKDGGVEEDDGWVITFVHNEDTNTSEVRVI 553
+ P EP FVP+ G EEDDG VI+ + +E V+
Sbjct: 495 YEEGAVPSEPF-----------------FVPRPGATEEDDGVVISII-SEKNGEGYALVL 536
Query: 554 DTKKFSSEPVAKITLPCRVPYGFHGAFM 581
D F E +A P +PYG HG ++
Sbjct: 537 DGSTF--EEIATAKFPYGLPYGLHGCWV 562
>Medtr3g109610.2 | carotenoid cleavage dioxygenase | HC |
chr3:51268545-51271852 | 20130731
Length = 503
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 159/388 (40%), Gaps = 48/388 (12%)
Query: 104 IQGHIPDGFPEGVYIRNGPNPLFGGLKSTNSVFGRSSHIWVEGEGMLHALYFKKSSHGNW 163
+QGHIP +G YIRNGP G + +F +G L L+F+
Sbjct: 99 VQGHIPLWL-KGTYIRNGPGMWNIGDYNFRHLF--------DGYATLVGLHFEDGR---- 145
Query: 164 TVLYNNKHVETETYKLEKQRNKPSFLPAIEGDSPAILFAYL--LNWLRFGKANKYISNTN 221
++ ++ VE++ Y+ K+ K + E AY+ L L G + +NT
Sbjct: 146 -LVAGHRQVESQAYQAAKKNQKICYREFSEVPKAENFLAYVGELANLFSGSSLTDNANTG 204
Query: 222 IIE-HSGKFYSVAESHIPQ-EIDIFTLKASNNWDVNGAWNRPF-TSHPKKVPGTGELVTF 278
+++ G+ + E+ ID TL+ +D + + ++HP + E +T
Sbjct: 205 VVKLGDGRVVCLTETQKGSIVIDPDTLETIGKFDYSDSLGGLIHSAHP--IVTDNEFLTL 262
Query: 279 GVASTKPFAVVGII--SADGKNLIHKVDLKLNRCSLG--HDIGVTERYIVIMDFPLTIDL 334
KP +V + ++ + +I +VD + S G H VTE Y+++ + PL
Sbjct: 263 IPDLVKPGYLVARMEPGSNERKVIGRVDCR-GGTSPGWVHSFPVTEHYVIVPEMPLRYCA 321
Query: 335 NRLLRGGSL----IKYTKEDIARIGVMPRYGNANSIKWFKVEPNCTFHIINSFEDGHE-- 388
LLR ++ E A + VM + + + +V TFH IN++E+ E
Sbjct: 322 QNLLRAEPTPLYKFQWHPESKAFMHVMCK-TSGKIVASVEVPLFVTFHFINAYEEEDEDG 380
Query: 389 ----VVVRGCRA---LDSIIPERDPNLKEFEWL-----SRCYEWRLNMQTGEVKEKDLCG 436
V+ C D + R NL+ F +R +R+ + D
Sbjct: 381 RVTAVIADCCEHNSNTDILDKLRLQNLRSFNGEDVLPDARVGRFRIPLDGSPYGTLDAAL 440
Query: 437 TTKVY---MDFPMINENFIGIKNRYAYT 461
+ MD IN N++G+K RYAY
Sbjct: 441 DPNEHGKGMDMCSINPNYLGLKYRYAYA 468