Miyakogusa Predicted Gene

Lj1g3v2052950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2052950.1 Non Characterized Hit- tr|I1N8T2|I1N8T2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6108
PE=,86.67,0.00000000000002,seg,NULL;
CYSTM,NULL,NODE_47069_length_578_cov_34.449825.path2.1
         (56 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g090035.1 | cysteine-rich TM module stress tolerance prote...    74   4e-14
Medtr7g090035.2 | cysteine-rich TM module stress tolerance prote...    55   1e-08

>Medtr7g090035.1 | cysteine-rich TM module stress tolerance
          protein | HC | chr7:35326889-35327603 | 20130731
          Length = 57

 Score = 73.6 bits (179), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 36/46 (78%), Positives = 39/46 (84%), Gaps = 1/46 (2%)

Query: 1  MQKSETQANQPPPGYPTE-NPPAKRKLFYRTKKKGERGFIEGCLFA 45
          MQK E Q NQPPPGYPT+ +PP KRKLF  TKKKG+RGFIEGCLFA
Sbjct: 1  MQKPEIQRNQPPPGYPTDQDPPTKRKLFISTKKKGDRGFIEGCLFA 46


>Medtr7g090035.2 | cysteine-rich TM module stress tolerance
          protein | HC | chr7:35326889-35327603 | 20130731
          Length = 47

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/33 (78%), Positives = 29/33 (87%), Gaps = 1/33 (3%)

Query: 14 GYPTE-NPPAKRKLFYRTKKKGERGFIEGCLFA 45
          GYPT+ +PP KRKLF  TKKKG+RGFIEGCLFA
Sbjct: 4  GYPTDQDPPTKRKLFISTKKKGDRGFIEGCLFA 36