Miyakogusa Predicted Gene

Lj1g3v2050890.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2050890.2 Non Characterized Hit- tr|D8RJ77|D8RJ77_SELML
Putative uncharacterized protein MYB3R1
OS=Selaginella,53.68,3e-17,coiled-coil,NULL; seg,NULL,CUFF.28611.2
         (496 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g110028.2 | transcription repressor MYB5 | HC | chr3:50889...   506   e-143
Medtr3g110028.1 | transcription repressor MYB5 | HC | chr3:50889...   506   e-143
Medtr1g026870.1 | transcription repressor MYB5 | HC | chr1:88268...   447   e-125
Medtr3g465780.1 | MFS transporter | LC | chr3:27007243-27011239 ...    50   5e-06

>Medtr3g110028.2 | transcription repressor MYB5 | HC |
           chr3:50889343-50895792 | 20130731
          Length = 903

 Score =  506 bits (1303), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 290/506 (57%), Positives = 341/506 (67%), Gaps = 59/506 (11%)

Query: 7   IENDTSSLVPVNSFCHGSDTIQTSNPRDEEPNGHAEQEEAGA-LCYEPPRFPSLDIPFLS 65
           +++D+  L PV++   GSDT+QT  P DE+PN H +QEE G  LCYEPPRFPSLDIPFLS
Sbjct: 441 VKDDSLKLEPVSNSGCGSDTMQTCYPIDEKPNVHTQQEETGGTLCYEPPRFPSLDIPFLS 500

Query: 66  CDLVQSGGDMQQEFSPLGIRQFMMSSMNCLTPFKLWDSPSRDDSPDALLRSAAKTFTATP 125
           CDL+QSG DMQQEFSPLGIRQFMMSSMNCLTPF+LWDSPSR DSPDALL+SAAKTFT+TP
Sbjct: 501 CDLIQSG-DMQQEFSPLGIRQFMMSSMNCLTPFRLWDSPSRIDSPDALLKSAAKTFTSTP 559

Query: 126 SILKK----RSRDLLSPLSDKRIDKKLEVDMTSTLIKNFSRLDVMFVDNETQHLLSPASV 181
           SI+KK    R RDLLSPLSD+R++KK E+DMTSTLI+NFSRLDVMF DNETQ        
Sbjct: 560 SIMKKKKRNRERDLLSPLSDRRMEKKHEIDMTSTLIRNFSRLDVMFDDNETQ-------- 611

Query: 182 EKLNSGTSVEDDRENHREAIKVEQVEEKNESANLXXXXXXXXXXXXXXXXMTEQRPLDID 241
                   +E D+EN   A  VE      E                      EQ PLD D
Sbjct: 612 -------GIEHDKENRGPAFMVEDKSNSEEK--------------------IEQPPLDAD 644

Query: 242 SKTTNNVNIVAVTMPQPSGILVDHDTNDQLLHSP-RGGSKSERVQSSSARKQKNPCTKVN 300
           SK  N+++  A  + QPS +L++HD ND  L+SP + G KS+ V S SAR  +   ++ +
Sbjct: 645 SKMKNDIDTTAEIVQQPSRVLIEHDMNDPSLYSPNQVGLKSDIVLSLSARSHQKSVSRFS 704

Query: 301 SPCIRAKEHERLSVAVTCVQSVCSSG-PGESSGDHTANDGAFETYSIFAGTPFRKSLESP 359
           SPC+R KEHERLSV+VTCVQS+CSS  PGE+  D T ND  FET +IF G PFRKS ESP
Sbjct: 705 SPCVRLKEHERLSVSVTCVQSICSSSIPGENMDDQTGNDDGFETNNIFGGMPFRKSFESP 764

Query: 360 SAWKSPAAWKSPWFVNAFLSSPRPGTELTIEDFGYLLSPGDR-SYDAIGLMKQVSEQTAV 418
           SAWKSP       F+N FLSSPR   E+TIED+G   SPGD+ SYDA+G +KQ+ E TA 
Sbjct: 765 SAWKSPL------FINTFLSSPRIDAEITIEDYGCFFSPGDKSSYDALGWIKQIGEHTAA 818

Query: 419 QYANAHEILENQTHKALLPRDASGXXXXXX-------XXXXXXXXXXVERRILDFSECET 471
           QYANA E LEN+T KA LP DASG                       VERR+LDFSEC T
Sbjct: 819 QYANALEALENETPKA-LPNDASGDDQENNDPHNQSGNHSKSPSNASVERRMLDFSECGT 877

Query: 472 PGD-DKSKSSGVTFSSPSSYLLKGCR 496
           P   DK KSS ++ SSPSSYLLKGCR
Sbjct: 878 PNKGDKGKSSAMSVSSPSSYLLKGCR 903


>Medtr3g110028.1 | transcription repressor MYB5 | HC |
           chr3:50889355-50895583 | 20130731
          Length = 903

 Score =  506 bits (1303), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 290/506 (57%), Positives = 341/506 (67%), Gaps = 59/506 (11%)

Query: 7   IENDTSSLVPVNSFCHGSDTIQTSNPRDEEPNGHAEQEEAGA-LCYEPPRFPSLDIPFLS 65
           +++D+  L PV++   GSDT+QT  P DE+PN H +QEE G  LCYEPPRFPSLDIPFLS
Sbjct: 441 VKDDSLKLEPVSNSGCGSDTMQTCYPIDEKPNVHTQQEETGGTLCYEPPRFPSLDIPFLS 500

Query: 66  CDLVQSGGDMQQEFSPLGIRQFMMSSMNCLTPFKLWDSPSRDDSPDALLRSAAKTFTATP 125
           CDL+QSG DMQQEFSPLGIRQFMMSSMNCLTPF+LWDSPSR DSPDALL+SAAKTFT+TP
Sbjct: 501 CDLIQSG-DMQQEFSPLGIRQFMMSSMNCLTPFRLWDSPSRIDSPDALLKSAAKTFTSTP 559

Query: 126 SILKK----RSRDLLSPLSDKRIDKKLEVDMTSTLIKNFSRLDVMFVDNETQHLLSPASV 181
           SI+KK    R RDLLSPLSD+R++KK E+DMTSTLI+NFSRLDVMF DNETQ        
Sbjct: 560 SIMKKKKRNRERDLLSPLSDRRMEKKHEIDMTSTLIRNFSRLDVMFDDNETQ-------- 611

Query: 182 EKLNSGTSVEDDRENHREAIKVEQVEEKNESANLXXXXXXXXXXXXXXXXMTEQRPLDID 241
                   +E D+EN   A  VE      E                      EQ PLD D
Sbjct: 612 -------GIEHDKENRGPAFMVEDKSNSEEK--------------------IEQPPLDAD 644

Query: 242 SKTTNNVNIVAVTMPQPSGILVDHDTNDQLLHSP-RGGSKSERVQSSSARKQKNPCTKVN 300
           SK  N+++  A  + QPS +L++HD ND  L+SP + G KS+ V S SAR  +   ++ +
Sbjct: 645 SKMKNDIDTTAEIVQQPSRVLIEHDMNDPSLYSPNQVGLKSDIVLSLSARSHQKSVSRFS 704

Query: 301 SPCIRAKEHERLSVAVTCVQSVCSSG-PGESSGDHTANDGAFETYSIFAGTPFRKSLESP 359
           SPC+R KEHERLSV+VTCVQS+CSS  PGE+  D T ND  FET +IF G PFRKS ESP
Sbjct: 705 SPCVRLKEHERLSVSVTCVQSICSSSIPGENMDDQTGNDDGFETNNIFGGMPFRKSFESP 764

Query: 360 SAWKSPAAWKSPWFVNAFLSSPRPGTELTIEDFGYLLSPGDR-SYDAIGLMKQVSEQTAV 418
           SAWKSP       F+N FLSSPR   E+TIED+G   SPGD+ SYDA+G +KQ+ E TA 
Sbjct: 765 SAWKSPL------FINTFLSSPRIDAEITIEDYGCFFSPGDKSSYDALGWIKQIGEHTAA 818

Query: 419 QYANAHEILENQTHKALLPRDASGXXXXXX-------XXXXXXXXXXVERRILDFSECET 471
           QYANA E LEN+T KA LP DASG                       VERR+LDFSEC T
Sbjct: 819 QYANALEALENETPKA-LPNDASGDDQENNDPHNQSGNHSKSPSNASVERRMLDFSECGT 877

Query: 472 PGD-DKSKSSGVTFSSPSSYLLKGCR 496
           P   DK KSS ++ SSPSSYLLKGCR
Sbjct: 878 PNKGDKGKSSAMSVSSPSSYLLKGCR 903


>Medtr1g026870.1 | transcription repressor MYB5 | HC |
           chr1:8826887-8820780 | 20130731
          Length = 983

 Score =  447 bits (1149), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 257/475 (54%), Positives = 303/475 (63%), Gaps = 50/475 (10%)

Query: 25  DTIQTSNPRDE--EPNGHAEQEEAGALCYEPPRFPSLDIPFLSCDLVQSGGDMQQEFSPL 82
           D  Q   P DE  +PN H E+   GALCYEPPRFPSLDIPFLSCDLVQSGGDMQQEFSPL
Sbjct: 519 DVNQNCCPTDEMPKPNMHTEKAGNGALCYEPPRFPSLDIPFLSCDLVQSGGDMQQEFSPL 578

Query: 83  GIRQFMMSSMNCLTPFKLWDSPSRDDSPDALLRSAAKTFTATPSILKKRSRDLLSPLSDK 142
           GIRQFMMSSMNC+TP +LWDSPSRDDSP+ALL+SAAKTF  TPSILKKR RDLLSPLSDK
Sbjct: 579 GIRQFMMSSMNCMTPSRLWDSPSRDDSPEALLKSAAKTFAGTPSILKKRCRDLLSPLSDK 638

Query: 143 RIDKKLEVDMTSTLIKNFSRLDVMFVDNETQHLLSPASVEKLNSGTS-VEDDRENHREAI 201
           RI KK E DM S+L K FS L+          +LSP+S++K NSG S  +DD+EN  +A 
Sbjct: 639 RIGKKHETDMASSLSKAFSSLE--------PDILSPSSLQKQNSGASGFDDDKENCGQAD 690

Query: 202 KVEQVEEKNESANLXXXXXXXXXXXXXXXXMTEQRPLDIDSKTTNNVNIVAVTMPQPSGI 261
           K +QVEE  +SA L                  +QR  D+DSK   +     + + Q SG+
Sbjct: 691 KGKQVEETIKSAILEEKKSQRDALDGNSPGKVKQRHFDVDSKMKIDAAATEIVL-QSSGV 749

Query: 262 LVDHDTNDQLLHSPRGGSKSERVQSSSARKQK----------------------NPCTKV 299
           L +HD ND  L+S       +R+  SS R  +                      NPC + 
Sbjct: 750 LSEHDRNDLSLYSSDQVGFRDRIIGSSVRTPRNLNNRSSETAPNQSIPSKLSYENPC-RF 808

Query: 300 NSPCIRAKEHERLSVAVTCVQSVCSSGPGESSGDHTANDGAFETYSIFAGTPFRKSLESP 359
           +SPC+RAKEHE L+V+V  V++     PG+SSGD + NDG FETYSIF GTPF K  ESP
Sbjct: 809 SSPCVRAKEHENLTVSVNRVKA-----PGDSSGDQSKNDGGFETYSIFGGTPFMKGFESP 863

Query: 360 SAWKSPAAWKSPWFVNAFLSSPRPGTELTIEDFGYLLSP-GDRSYDAIGLMKQVSEQTAV 418
           SAWKS     SPWF N FL S  P TE+ IEDFG+  SP G+RSYDAIGL+KQV EQTA 
Sbjct: 864 SAWKS-----SPWFRNTFLCS--PNTEIRIEDFGFFKSPEGERSYDAIGLLKQVGEQTAA 916

Query: 419 QYANAHEILENQTHKALLPRDASGXXXX-XXXXXXXXXXXXVERRILDFSECETP 472
            Y NA E+L+N T KA +P+DASG                 VERR+LDFSEC TP
Sbjct: 917 TYENAQELLKNDTPKA-VPKDASGNDNSPSANNSKLTSNALVERRVLDFSECGTP 970


>Medtr3g465780.1 | MFS transporter | LC | chr3:27007243-27011239 |
           20130731
          Length = 162

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 385 TELTIEDFGYLLS-PGDRSYDAIGLMKQVSEQTAVQYANAHEILENQTHKAL 435
           T +T   FG   S  G+R++D +  +KQV EQTA +Y NAH+IL+N T  A+
Sbjct: 75  TSVTAPGFGIFKSLEGERNFDTVRFLKQVDEQTAARYENAHDILKNDTPTAV 126