Miyakogusa Predicted Gene

Lj1g3v2038790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2038790.1 tr|G7ZWL9|G7ZWL9_MEDTR C-myb-like transcription
factor OS=Medicago truncatula GN=MTR_042s0013 PE=4
S,76.56,2e-18,Myb_DNA-binding,SANT/Myb domain; no
description,Homeodomain-like; HTH_MYB,Myb domain;
Homeodomain-li,CUFF.28605.1
         (68 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g110028.2 | transcription repressor MYB5 | HC | chr3:50889...    97   4e-21
Medtr3g110028.1 | transcription repressor MYB5 | HC | chr3:50889...    97   4e-21
Medtr1g026870.1 | transcription repressor MYB5 | HC | chr1:88268...    91   3e-19
Medtr7g461410.1 | myb transcription factor | HC | chr7:22216202-...    58   2e-09
Medtr7g061330.1 | myb transcription factor | HC | chr7:22157000-...    58   2e-09
Medtr7g061330.2 | myb transcription factor | HC | chr7:22157012-...    58   2e-09

>Medtr3g110028.2 | transcription repressor MYB5 | HC |
          chr3:50889343-50895792 | 20130731
          Length = 903

 Score = 96.7 bits (239), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 49/64 (76%), Positives = 50/64 (78%), Gaps = 4/64 (6%)

Query: 1  MEGERLTPAPSEGTVDGVQKIRALHGRTTGPTRRSTKGQWTPEEDEILRNAVHRFKGKNW 60
          M  E   PA S    DGVQKIRALHGRTTGPTRRSTKGQWTPEED ILR AV RF+GKNW
Sbjct: 1  MGSESTIPALS----DGVQKIRALHGRTTGPTRRSTKGQWTPEEDNILRKAVERFQGKNW 56

Query: 61 KKIG 64
          KKI 
Sbjct: 57 KKIA 60


>Medtr3g110028.1 | transcription repressor MYB5 | HC |
          chr3:50889355-50895583 | 20130731
          Length = 903

 Score = 96.7 bits (239), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 49/64 (76%), Positives = 50/64 (78%), Gaps = 4/64 (6%)

Query: 1  MEGERLTPAPSEGTVDGVQKIRALHGRTTGPTRRSTKGQWTPEEDEILRNAVHRFKGKNW 60
          M  E   PA S    DGVQKIRALHGRTTGPTRRSTKGQWTPEED ILR AV RF+GKNW
Sbjct: 1  MGSESTIPALS----DGVQKIRALHGRTTGPTRRSTKGQWTPEEDNILRKAVERFQGKNW 56

Query: 61 KKIG 64
          KKI 
Sbjct: 57 KKIA 60


>Medtr1g026870.1 | transcription repressor MYB5 | HC |
          chr1:8826887-8820780 | 20130731
          Length = 983

 Score = 90.5 bits (223), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/54 (77%), Positives = 47/54 (87%), Gaps = 1/54 (1%)

Query: 12 EGTVDGVQKIRA-LHGRTTGPTRRSTKGQWTPEEDEILRNAVHRFKGKNWKKIG 64
          +G +D V+K+RA LHGRTTGPTRRSTKGQWTPEEDE LR AV RF+GKNWKKI 
Sbjct: 7  DGPIDSVEKVRAALHGRTTGPTRRSTKGQWTPEEDETLRKAVQRFQGKNWKKIA 60


>Medtr7g461410.1 | myb transcription factor | HC |
          chr7:22216202-22220641 | 20130731
          Length = 566

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/40 (72%), Positives = 31/40 (77%), Gaps = 1/40 (2%)

Query: 25 HGRTTGPTRRSTKGQWTPEEDEILRNAVHRFKGKNWKKIG 64
          H RTTGP RR+ KG WT EEDE LRNAV  FKGK+WKKI 
Sbjct: 50 HRRTTGPIRRA-KGGWTAEEDETLRNAVAAFKGKHWKKIA 88


>Medtr7g061330.1 | myb transcription factor | HC |
          chr7:22157000-22164437 | 20130731
          Length = 566

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/40 (72%), Positives = 31/40 (77%), Gaps = 1/40 (2%)

Query: 25 HGRTTGPTRRSTKGQWTPEEDEILRNAVHRFKGKNWKKIG 64
          H RTTGP RR+ KG WT EEDE LRNAV  FKGK+WKKI 
Sbjct: 50 HRRTTGPIRRA-KGGWTAEEDETLRNAVAAFKGKHWKKIA 88


>Medtr7g061330.2 | myb transcription factor | HC |
          chr7:22157012-22164330 | 20130731
          Length = 530

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/42 (69%), Positives = 32/42 (76%), Gaps = 1/42 (2%)

Query: 23 ALHGRTTGPTRRSTKGQWTPEEDEILRNAVHRFKGKNWKKIG 64
           L+ RTTGP RR+ KG WT EEDE LRNAV  FKGK+WKKI 
Sbjct: 12 CLYRRTTGPIRRA-KGGWTAEEDETLRNAVAAFKGKHWKKIA 52