Miyakogusa Predicted Gene

Lj1g3v2036760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2036760.1 Non Characterized Hit- tr|I1JUR6|I1JUR6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38858 PE,84.41,0,P-loop
containing nucleoside triphosphate hydrolases,NULL;
GTPase_EngB,GTP-binding protein, ribosome,CUFF.28339.1
         (292 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g109540.1 | ribosome biogenesis GTP-binding protein YsxC |...   403   e-112
Medtr4g088800.1 | P-loop nucleoside triphosphate hydrolase super...   298   4e-81
Medtr3g466440.1 | GTP-binding protein EngB, putative | HC | chr3...   103   2e-22
Medtr3g466440.2 | GTP-binding protein EngB, putative | HC | chr3...   103   2e-22

>Medtr3g109540.1 | ribosome biogenesis GTP-binding protein YsxC | HC
           | chr3:50687042-50683808 | 20130731
          Length = 301

 Score =  403 bits (1035), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 205/240 (85%), Positives = 226/240 (94%), Gaps = 2/240 (0%)

Query: 53  DKLFIPPETKLPLDAAAARILNGSNILLSDYASDAQVLQADFVKSSVETDACPSDGLPEF 112
           +KLFIPP T +      ARILNGSNILLS+YA+DAQ++QADFVKSSV T+ CPSDGLPEF
Sbjct: 64  EKLFIPPNTHV--THENARILNGSNILLSNYANDAQIIQADFVKSSVRTEDCPSDGLPEF 121

Query: 113 ALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINNSWYLVDLPGYGYASAPK 172
           ALVGRSNVGKSSLLNS+VRRKKLALTSKKPGKTQ INHFR+N+SWYLVDLPGYGYASAP+
Sbjct: 122 ALVGRSNVGKSSLLNSIVRRKKLALTSKKPGKTQLINHFRVNDSWYLVDLPGYGYASAPQ 181

Query: 173 ELRMDWEKFSKDYFLNRSTLVSVFLLIDASIPAKKIDLDYASWLGQNQIPMTLIFTKCDK 232
           ELRMDW KF+KDYFLNRSTLVSVFLLIDASIPA+KIDL+YA+WLG+N+IPMTLIFTKCDK
Sbjct: 182 ELRMDWAKFTKDYFLNRSTLVSVFLLIDASIPARKIDLEYAAWLGENKIPMTLIFTKCDK 241

Query: 233 RKKVKNGGKRPEENVNDFQDLIRGFFQTVPPWIMTSSVTHQGRDEILLHMAQLRNYWLKH 292
           RKK KNGGKRPE+NVNDFQ+LIRG F+TVPPWIMTS+VTHQGRDEILLHMAQLRNYWLKH
Sbjct: 242 RKKKKNGGKRPEDNVNDFQELIRGSFETVPPWIMTSNVTHQGRDEILLHMAQLRNYWLKH 301


>Medtr4g088800.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr4:35404838-35407436 |
           20130731
          Length = 297

 Score =  298 bits (763), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/235 (60%), Positives = 181/235 (77%), Gaps = 3/235 (1%)

Query: 55  LFIPPETKLPLDAAAARILNGSNILLSDYASDAQVLQADFVKSSVETDACPSDGLPEFAL 114
           LFIPP  + P +   + IL  SNI++  YA D+++   +FVKSS +   CP D  PEFA+
Sbjct: 64  LFIPPGVE-PTEINDSMILPFSNIVVGPYAGDSRIKDVEFVKSSPKAKDCPKDHRPEFAV 122

Query: 115 VGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINNSWYLVDLPGYGYASAPKEL 174
           +GRSNVGKSSL+NSLVR+K+LALTSKKPGKTQ INHF +N  WYLVDLPGYG+A A +  
Sbjct: 123 LGRSNVGKSSLINSLVRKKELALTSKKPGKTQLINHFLVNKKWYLVDLPGYGFAKASEAA 182

Query: 175 RMDWEKFSKDYFLNRSTLVSVFLLIDASIPAKKIDLDYASWLGQNQIPMTLIFTKCDKRK 234
           ++DW  F+K YFLNR TLV+V LLIDAS+P ++ID D A+WLG+N IP+T +FTKCDK K
Sbjct: 183 KVDWSSFTKGYFLNRDTLVAVLLLIDASVPPQRIDFDCANWLGRNNIPVTFVFTKCDKMK 242

Query: 235 KVKNGGKRPEENVNDFQDLIRGFFQTVPPWIMTSSVTHQGRDEILLHMAQLRNYW 289
             K  GK PEEN+ DFQ++I+  ++  PPWIMTSSVT  GRD++LLH++QLRNYW
Sbjct: 243 VAK--GKIPEENIRDFQEIIKQNYKQHPPWIMTSSVTGLGRDDLLLHVSQLRNYW 295


>Medtr3g466440.1 | GTP-binding protein EngB, putative | HC |
           chr3:27296439-27291356 | 20130731
          Length = 664

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 7/155 (4%)

Query: 84  ASDAQVLQADFVKSSVE-------TDACPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLA 136
           +SD + ++ +  ++ +E       + + P   LPE A  G+SNVGKSSLLN+L R+  + 
Sbjct: 456 SSDRENIEENVFRNRLEFFAAAKVSSSFPPPNLPEIAFAGKSNVGKSSLLNALTRQWGVV 515

Query: 137 LTSKKPGKTQCINHFRINNSWYLVDLPGYGYASAPKELRMDWEKFSKDYFLNRSTLVSVF 196
            TS KPG TQ IN F +     LVDLPGYG+A A  E++  WE   K+Y   R  L  V 
Sbjct: 516 RTSDKPGHTQTINFFNLGTKLSLVDLPGYGFAYAKDEVKEAWEDLVKEYVSTRVGLKQVC 575

Query: 197 LLIDASIPAKKIDLDYASWLGQNQIPMTLIFTKCD 231
           LLID     K  D++    + +++    ++ TK D
Sbjct: 576 LLIDTKWGMKPRDIELIDLMERSKTKYQIVLTKTD 610


>Medtr3g466440.2 | GTP-binding protein EngB, putative | HC |
           chr3:27296439-27291356 | 20130731
          Length = 664

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 7/155 (4%)

Query: 84  ASDAQVLQADFVKSSVE-------TDACPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLA 136
           +SD + ++ +  ++ +E       + + P   LPE A  G+SNVGKSSLLN+L R+  + 
Sbjct: 456 SSDRENIEENVFRNRLEFFAAAKVSSSFPPPNLPEIAFAGKSNVGKSSLLNALTRQWGVV 515

Query: 137 LTSKKPGKTQCINHFRINNSWYLVDLPGYGYASAPKELRMDWEKFSKDYFLNRSTLVSVF 196
            TS KPG TQ IN F +     LVDLPGYG+A A  E++  WE   K+Y   R  L  V 
Sbjct: 516 RTSDKPGHTQTINFFNLGTKLSLVDLPGYGFAYAKDEVKEAWEDLVKEYVSTRVGLKQVC 575

Query: 197 LLIDASIPAKKIDLDYASWLGQNQIPMTLIFTKCD 231
           LLID     K  D++    + +++    ++ TK D
Sbjct: 576 LLIDTKWGMKPRDIELIDLMERSKTKYQIVLTKTD 610