Miyakogusa Predicted Gene

Lj1g3v2036740.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2036740.2 Non Characterized Hit- tr|I1JUR7|I1JUR7_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,91.91,0,Adaptin_N,Clathrin/coatomer adaptor, adaptin-like,
N-terminal; B2-adapt-app_C,Beta-adaptin appendage,CUFF.28338.2
         (838 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g109922.1 | beta-adaptin A-like protein | HC | chr3:506893...  1511   0.0  
Medtr4g076210.1 | beta-adaptin-like protein | HC | chr4:29181926...   337   2e-92
Medtr5g079920.1 | affected traffi cking protein | HC | chr...    81   5e-15

>Medtr3g109922.1 | beta-adaptin A-like protein | HC |
           chr3:50689381-50699624 | 20130731
          Length = 844

 Score = 1511 bits (3912), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 741/826 (89%), Positives = 762/826 (92%), Gaps = 4/826 (0%)

Query: 17  GKSEVSDLKLQLRQLAGSRAPGTDDLKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDI 76
           GKSEVSDLKLQLRQLAGSRAPGTDD KRDL+KKVISNMTIGIDVSSLFGEMVMCSATSDI
Sbjct: 19  GKSEVSDLKLQLRQLAGSRAPGTDDSKRDLYKKVISNMTIGIDVSSLFGEMVMCSATSDI 78

Query: 77  VLKKMCYLYVGNYAKGNPELALLTINFLQRDCKDMDPMIRGLALRSLCTLRVENLVEYLV 136
           VLKKMCYLYVGNYAK NP+LALLTINFLQRDCKD DPMIRGLALRSLC+LRV NLVEYLV
Sbjct: 79  VLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDQDPMIRGLALRSLCSLRVANLVEYLV 138

Query: 137 GPLGSGLKDNNSYVRMVAVIGVLKLYHISASTCIDADFPATLKHLMLNDPDTQVVANCLS 196
           GPLGSGLKDNNSYVR VAVIGVLKLYHISASTCIDADFP TLKHLMLND DTQVVANCLS
Sbjct: 139 GPLGSGLKDNNSYVRTVAVIGVLKLYHISASTCIDADFPETLKHLMLNDQDTQVVANCLS 198

Query: 197 ALQEIWTLXXXXXXXXXXXXXXVHSKPVIYYLLNRIKEFSEWSQCVVLELVAKYVPSDNS 256
           ALQEIWTL              +HSKP++YYLLNRIKEFSEW+QC+V+ELVAKY+PSDNS
Sbjct: 199 ALQEIWTLESTTSEEAARERETLHSKPIVYYLLNRIKEFSEWAQCLVMELVAKYIPSDNS 258

Query: 257 EIFDIMNLLEDRLQHANGAVVLATTKVFLHLTLSMADVHQQVYERIKAPLLTQVSSGSPE 316
           EIFDIMNLLEDRLQHANGAVVLATTKVFLHLTLSMADVHQQVYERIKAPLLTQVSSGSPE
Sbjct: 259 EIFDIMNLLEDRLQHANGAVVLATTKVFLHLTLSMADVHQQVYERIKAPLLTQVSSGSPE 318

Query: 317 QSYAILSHLHLLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTE 376
           QSYAILSHLHLLVMRAPYIFS DYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTE
Sbjct: 319 QSYAILSHLHLLVMRAPYIFSLDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTE 378

Query: 377 LCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLL 436
           LCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVT+EALVLVKDLL
Sbjct: 379 LCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTSEALVLVKDLL 438

Query: 437 RKYPQWSQDCIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMNDAPYVLESLVENWDEEH 496
           RKYPQWSQDCIAVVGNISS NVQEPKAKAALIWMLGEYSQDM+DAPYVLESLVENWDEEH
Sbjct: 439 RKYPQWSQDCIAVVGNISSNNVQEPKAKAALIWMLGEYSQDMHDAPYVLESLVENWDEEH 498

Query: 497 SAEVRLHLLTAVMKCFFKRPPETQKXXXXXXXXXXXDFHQDVHDRALFYYRLLQYKVSVA 556
           SAEVRLHLLTAVMKCFFKRPPETQK           DFHQDVHDRALFYYRLLQY VSVA
Sbjct: 499 SAEVRLHLLTAVMKCFFKRPPETQKALGAALAAGLADFHQDVHDRALFYYRLLQYNVSVA 558

Query: 557 ESVVNPPKQAVSVFADTQNSEVKDRIFDEFNSLSVVYQKPSYMFTDKEHRGILEFSDELG 616
           ESVVNPPKQAVSVFADTQ+SEVKDRIFDEFNSLSVVYQKPSYMFTDKEHRG  EF+DELG
Sbjct: 559 ESVVNPPKQAVSVFADTQSSEVKDRIFDEFNSLSVVYQKPSYMFTDKEHRGTFEFADELG 618

Query: 617 NLSISVESGDSVVPAQRVEENDKDLLLSTTEKDEVRDPGSNGSAYNAPSYD----AAISQ 672
           NLSIS ESGDSVVP QRVE NDKDLLLSTTEKD+VRD GSNGSAYNAPSY+    +A SQ
Sbjct: 619 NLSISAESGDSVVPVQRVEANDKDLLLSTTEKDDVRDTGSNGSAYNAPSYNGSAPSAASQ 678

Query: 673 PLADLALPSTGLTGQAPASSLAIDDLLGLGFPVGTAATPSPPPLNLNPKAVLDPGTFQQK 732
           PLADLA  ST +T QAPAS LAIDDLLGL F VGT  TPSPPPL LNPKAVLDPGTFQQK
Sbjct: 679 PLADLAFSSTSMTSQAPASGLAIDDLLGLDFSVGTVTTPSPPPLTLNPKAVLDPGTFQQK 738

Query: 733 WRQLPISLSEEYSLSPQGIVSLTAPNALLRHMQSHSIQCIASGRQSPNFKFFFFAQKADE 792
           WRQLPISLSEEYSLSP  I SLTAPNALLRHMQ HSIQCIASG QSPNFKFFFFAQKA+E
Sbjct: 739 WRQLPISLSEEYSLSPLAIASLTAPNALLRHMQGHSIQCIASGGQSPNFKFFFFAQKAEE 798

Query: 793 ASVYLVECIINTSSGKSQINIKADDQSSSQAFSTLFQSALSKFGLP 838
            S+YLVECIINTSS KSQI IKADDQSSS+AFSTLFQSALSKFGLP
Sbjct: 799 TSIYLVECIINTSSAKSQIKIKADDQSSSRAFSTLFQSALSKFGLP 844


>Medtr4g076210.1 | beta-adaptin-like protein | HC |
           chr4:29181926-29190719 | 20130731
          Length = 896

 Score =  337 bits (865), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 209/591 (35%), Positives = 341/591 (57%), Gaps = 24/591 (4%)

Query: 18  KSEVSDLKLQLRQLAGSRAPGTDDLKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDIV 77
           K E+ +LK +L            D ++D  KKVI+ MT+G DVSSLF ++V C  T ++ 
Sbjct: 14  KGEIPELKEELNS-------QYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLE 66

Query: 78  LKKMCYLYVGNYAKGNPELALLTINFLQRDCKDMDPMIRGLALRSLCTLRVENLVEYLVG 137
           LKK+ YLY+ NYAK  P+LA+L +N   +D +D +P+IR LA+R++  +RV+ + EYL  
Sbjct: 67  LKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCD 126

Query: 138 PLGSGLKDNNSYVRMVAVIGVLKLYHISASTCIDADFPATLKHLMLNDPDTQVVANCLSA 197
           PL   LKD++ YVR  A I V KLY I+A    D  F  +LK L ++D +  VVAN ++A
Sbjct: 127 PLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDL-ISDNNPMVVANAVAA 185

Query: 198 LQEIWTLXXXXXXXXXXXXXXVHSKPVIYYLLNRIKEFSEWSQCVVLELVAKYVPSDNSE 257
           L EI                  H+   +  LL  + E +EW Q  +L+ +++Y  +D  E
Sbjct: 186 LAEI-----QDNSTRPIFEITSHT---LSKLLTALNECTEWGQVFILDALSRYKAADARE 237

Query: 258 IFDIMNLLEDRLQHANGAVVLATTKVFLHLT--LSMADVHQQVYERIKAPLLTQVSSGSP 315
             +I+  +  RLQHAN AVVL+  K+ L     ++  DV + + +++  PL+T +S+  P
Sbjct: 238 AENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSA-EP 296

Query: 316 EQSYAILSHLHLLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVT 375
           E  Y  L +++L+V R P I + + K F+C+YN+P YVK  KLE++  +A++ N  +++ 
Sbjct: 297 EIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLL 356

Query: 376 ELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVKD 434
           E  EYA  VD+   R+++RA+G+ A++ +      +  LL+ ++++ +YV  EA++++KD
Sbjct: 357 EFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKD 416

Query: 435 LLRKYPQWSQDCIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMNDAPYVLESLVENWDE 494
           + R+YP   +  IA +   S   + EP+AKA++IW++GEY++ +++A  +LES +E++ E
Sbjct: 417 IFRRYPNTYESIIATLCE-SLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLESFPE 475

Query: 495 EHSAEVRLHLLTAVMKCFFKRPPE--TQKXXXXXXXXXXXDFHQDVHDRALFYYRLLQYK 552
           E  A V+L LLTA +K F K+P E   Q              + D+ DRA  Y+RLL   
Sbjct: 476 E-PALVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATMETDNPDLRDRAYIYWRLLSTD 534

Query: 553 VSVAESVVNPPKQAVSVFADTQNSEVKDRIFDEFNSLSVVYQKPSYMFTDK 603
              A+ VV   K  ++  ++  +  + D +     +LS VY KP   F  +
Sbjct: 535 PEAAKDVVLAEKPVITDDSNNLDPSLLDELLVNIATLSSVYHKPPEAFVTR 585


>Medtr5g079920.1 | affected traffi cking protein | HC |
           chr5:34196045-34185426 | 20130731
          Length = 1126

 Score = 80.9 bits (198), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 36/223 (16%)

Query: 40  DDLKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKGNPELALL 99
           D  K +  K++++ +  G DVS+ F ++V   A+  + +KK+ YLY+ +YA+  P  ALL
Sbjct: 46  DSEKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALL 105

Query: 100 TINFLQRDCKDMDPMIRGLALRSLCTLRVENLVEYLVGPLGSGLKDNNSYVRMVAVIGVL 159
           +IN  Q+D  D +P++R  ALR++  +R+  +   ++  +G   +D + YVR  A   + 
Sbjct: 106 SINCFQKDLGDTNPLVRAWALRAMAGIRLHAIAPLVLVAVGKCARDPSVYVRKCAANALP 165

Query: 160 KLYHISA---STCIDADFPATLKHLMLNDPDTQVVANCLSALQEIWTLXXXXXXXXXXXX 216
           KL+ +     +T I+      +  L+LND    VV    SA   +               
Sbjct: 166 KLHDLRMDEHATAIE-----EMVGLLLNDHSPGVVGAAASAFTSVC-------------- 206

Query: 217 XXVHSKPVIYYLLNR--------IKEFSEWSQCVVLELVAKYV 251
                 P  + L+ R        + +  EW Q +++ ++ +YV
Sbjct: 207 ------PNNFSLIGRNYRKLCEILPDVEEWGQIMLIGILLRYV 243



 Score = 60.8 bits (146), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 148/321 (46%), Gaps = 31/321 (9%)

Query: 250 YVPSDNSEIFDIMNLLEDRLQHANGAVVLATTKVFLHLTLSMADVHQQVYERIKAPLLTQ 309
           Y    N  +  ++      L   N AVVLA   V  H  ++     ++  +RI  PLL  
Sbjct: 324 YTSCSNEVVRILLQCTSPLLWSHNSAVVLAAAGV--HWIMA----PKEDVKRIVKPLLFV 377

Query: 310 VSSGSPEQSYAILSHLHLLVMRAPYIFSSDYKHFYCQYNEPSY-VKKLKLEMLTAVANES 368
           + S SP   Y +L ++ +     P +F+  Y+  +  Y+  SY +K LKL++L+ +A++S
Sbjct: 378 LRS-SPASRYVVLCNIQVFAKAMPSLFAPHYEDLFI-YSVDSYQIKALKLDILSIIASDS 435

Query: 369 NTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDV-NAIVDRLL-----QFLEMEKD 422
           +   I+ E  +Y  + D   A +++ A+G  A +   +  A ++ LL     +FL  E  
Sbjct: 436 SISFILKEFQDYIRDPDRRFAADTVAAIGLCAQRLPKMATACLEGLLALIRQEFLCGEIR 495

Query: 423 YVTAEALVLVKDLLR-------KYPQWSQDCIAVVGNISSKNVQEPKAKAALIWMLGEYS 475
            +  E  VL++ ++        + P + +  I +V ++ +  ++ P A+A ++W+LGEY 
Sbjct: 496 SLDGEEGVLIQAIMSIISIIKLEPPSYEKVIIQLVRSLDT--IKVPAARAMIVWLLGEYC 553

Query: 476 QDMNDAPYVLESLVE--NWD-EEHSAEVRLHLLTAVMK---CFFKRPPET-QKXXXXXXX 528
                 P +L ++++   W       E +L +L  + K   C       T +K       
Sbjct: 554 SLGEMIPRMLSTVLKYLAWCFTSEGLETKLQILNTITKVSLCIKGEDSWTLRKIWTYVIE 613

Query: 529 XXXXDFHQDVHDRALFYYRLL 549
               D + D+ DR+ F  +LL
Sbjct: 614 LAERDLNYDIRDRSRFLKKLL 634