Miyakogusa Predicted Gene

Lj1g3v2035280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2035280.1 Non Characterized Hit- tr|G7J2X5|G7J2X5_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,56.25,1e-18,
,NODE_65055_length_626_cov_60.869011.path1.1
         (108 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g109430.1 | hypothetical protein | HC | chr3:50613920-5061...    97   3e-21
Medtr8g083490.1 | hypothetical protein | HC | chr8:43602505-4360...    57   5e-09
Medtr4g012390.1 | hypothetical protein | LC | chr4:3284996-32829...    52   1e-07
Medtr4g012350.1 | hypothetical protein | LC | chr4:3271455-32710...    50   4e-07

>Medtr3g109430.1 | hypothetical protein | HC |
           chr3:50613920-50613033 | 20130731
          Length = 117

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/112 (56%), Positives = 74/112 (66%), Gaps = 15/112 (13%)

Query: 1   MDMKKQWFSSRSQRKENIRFGRSNTKPHHYH--------DDGTRTVWQMLWRKLKGDRKK 52
           MDMKK  F SR +     R GRS T   +YH        D   +TVWQ +W+KLK D+KK
Sbjct: 1   MDMKKYMFGSRRE----ARLGRSYTTKTNYHSNISPSNYDGSKKTVWQKIWKKLKRDKKK 56

Query: 53  KVFSSSPAR--GDGV-YDEETYSMNFDQGTGWMEPDNIPRSFSARFADPSWI 101
              S SP+    DGV YD++TYSMNFD GTGWMEPDN+PRSFSAR+ADP WI
Sbjct: 57  VFNSPSPSTIVEDGVSYDQDTYSMNFDHGTGWMEPDNLPRSFSARYADPCWI 108


>Medtr8g083490.1 | hypothetical protein | HC |
           chr8:43602505-43603133 | 20130731
          Length = 108

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 9/104 (8%)

Query: 1   MDMKKQWFSSRSQRKENIRFGRSNTKPHHYHDDGTRTV-----WQMLWRKLKGDRKKKVF 55
           MD+K +  SSR  ++     GR   +  H +     T      W+MLW KLK ++KK + 
Sbjct: 1   MDIKSECNSSRKTKE----LGRFCYEIEHTNSLSATTRSSKFRWKMLWMKLKKEKKKLLE 56

Query: 56  SSSPARGDGVYDEETYSMNFDQGTGWMEPDNIPRSFSARFADPS 99
           S+S       YD  TYS NF+QGT + EPD + RSFS RFADP 
Sbjct: 57  STSSPLQQDPYDPFTYSQNFEQGTVFDEPDYLSRSFSVRFADPC 100


>Medtr4g012390.1 | hypothetical protein | LC | chr4:3284996-3282930
           | 20130731
          Length = 169

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 10/71 (14%)

Query: 37  TVWQMLWRKLKGDRKKKVF-SSSPARGDGVYDEETYSMNFDQGTGWMEPDNIPRSFSARF 95
           T  + LW+K+   +K+++F SSSP     +YD  +Y  NFD G  +++PDN  RS SARF
Sbjct: 50  TRLKTLWKKINRQKKRRIFRSSSPV---FLYDRCSYLQNFDDG--YIDPDNFSRSLSARF 104

Query: 96  ADPSWISPSKL 106
           A P    PSK+
Sbjct: 105 ATP----PSKI 111


>Medtr4g012350.1 | hypothetical protein | LC | chr4:3271455-3271087
           | 20130731
          Length = 122

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 10/66 (15%)

Query: 42  LWRKLKGDRKKKVF-SSSPARGDGVYDEETYSMNFDQGTGWMEPDNIPRSFSARFADPSW 100
           LW K+   +K ++F SSSP     +YD  +Y  NFD G+  ++PDN  RSFSARFA P  
Sbjct: 46  LWMKINRQKKMRIFRSSSPV---FLYDHCSYLQNFDDGS--IDPDNFSRSFSARFAGP-- 98

Query: 101 ISPSKL 106
             PSK+
Sbjct: 99  --PSKI 102