Miyakogusa Predicted Gene

Lj1g3v2035090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2035090.1 Non Characterized Hit- tr|I3S4X3|I3S4X3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.05,0,PCI/PINT
associated module,PCI/PINT associated module; motif in proteasome
subunits, Int-6, Nip-1 a,,CUFF.28283.1
         (422 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g109300.1 | 26S proteasome non-ATPase regulatory subunit-l...   724   0.0  
Medtr1g009010.2 | 26S proteasome non-ATPase regulatory subunit-l...   707   0.0  
Medtr1g009010.1 | 26S proteasome non-ATPase regulatory subunit-l...   707   0.0  
Medtr7g087530.1 | COP9 signalosome complex subunit 2 | HC | chr7...    80   4e-15

>Medtr3g109300.1 | 26S proteasome non-ATPase regulatory subunit-like
           protein | LC | chr3:50533714-50540516 | 20130731
          Length = 671

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/422 (84%), Positives = 374/422 (88%)

Query: 1   MSSSYLPATTESVALALEAKDPSEGISILYRVLEDPSSSPEALRMKEQAITNLTDLLRQE 60
           MS+SYLPATT+S+A ALEAKD S  ISILYRVL+DPSSSPEALRMKEQAITNLTDLLRQE
Sbjct: 250 MSTSYLPATTDSIAQALEAKDTSGAISILYRVLDDPSSSPEALRMKEQAITNLTDLLRQE 309

Query: 61  NRGEDLRSLLTQLRPFFSLIPKAKTAKIVRGIIDSVAKIPGSSDLQIALCKEMVQWTRAE 120
           NRGEDLRSLLT LRPFFSLIPKAKTAKIVRGIIDSVAKIPG+SDLQI+LCKEMVQWTRAE
Sbjct: 310 NRGEDLRSLLTSLRPFFSLIPKAKTAKIVRGIIDSVAKIPGTSDLQISLCKEMVQWTRAE 369

Query: 121 KRTFLRQRVEARLAALLMETKEYSEALTLLSGLVKXXXXXXXXXXXXXXXXXXXXXHFSL 180
           KRTFLRQR+EARLAALLMETKEYSEALTLLSGLVK                     HFSL
Sbjct: 370 KRTFLRQRIEARLAALLMETKEYSEALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSL 429

Query: 181 RXXXXXXXXXXXXXXXXXXIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNA 240
           R                  IYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNA
Sbjct: 430 RNLPKAKAALTAARTAANAIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNA 489

Query: 241 LEDPKAVFSLKYMLLCKIMVNQADDVGGIISSKAGLQYVGPDLDAMKAVADAHSKRSLKL 300
           LEDPKA+FSLKYMLLCKIMVNQADDVGGIISSKAGLQYVGPDLDAMKAVADA+SKRSLK 
Sbjct: 490 LEDPKAIFSLKYMLLCKIMVNQADDVGGIISSKAGLQYVGPDLDAMKAVADAYSKRSLKF 549

Query: 301 FETALRNYKAQLEEDPIVHRHLQSLYGTLMEQNLCRLIEPFSRVEIAHIAELIELPIDHV 360
           FETAL++YKAQL EDPIVHRH+ SLY TL+EQNLCRLIEPFSRVEIAHIAELIELPIDHV
Sbjct: 550 FETALQDYKAQLGEDPIVHRHISSLYDTLLEQNLCRLIEPFSRVEIAHIAELIELPIDHV 609

Query: 361 ERKLSQMILDKKFAGTLDQGAGCLIIFDDPKTDAIYPATLETISNIGKVVDSLYVRSAKI 420
           ERK+SQMILDKKFAGTLDQGAGCL+IFDDPKTDAIYPATLETISN+GKVVDSLYVRSAKI
Sbjct: 610 ERKMSQMILDKKFAGTLDQGAGCLVIFDDPKTDAIYPATLETISNVGKVVDSLYVRSAKI 669

Query: 421 MA 422
           MA
Sbjct: 670 MA 671


>Medtr1g009010.2 | 26S proteasome non-ATPase regulatory subunit-like
           protein | HC | chr1:1144984-1141945 | 20130731
          Length = 421

 Score =  707 bits (1826), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/419 (83%), Positives = 369/419 (88%)

Query: 3   SSYLPATTESVALALEAKDPSEGISILYRVLEDPSSSPEALRMKEQAITNLTDLLRQENR 62
           SS+LPATTES+A ALEAKDPSE ISILYRVL DPSSSP+ALRMKEQAITNLTDLLRQENR
Sbjct: 2   SSFLPATTESIAQALEAKDPSESISILYRVLGDPSSSPDALRMKEQAITNLTDLLRQENR 61

Query: 63  GEDLRSLLTQLRPFFSLIPKAKTAKIVRGIIDSVAKIPGSSDLQIALCKEMVQWTRAEKR 122
            EDLRSLLTQLR FFSLIPKAKTAKIVRGIIDSVAKIPG+S+LQI+LCKEMVQWTR EKR
Sbjct: 62  AEDLRSLLTQLRSFFSLIPKAKTAKIVRGIIDSVAKIPGTSELQISLCKEMVQWTRDEKR 121

Query: 123 TFLRQRVEARLAALLMETKEYSEALTLLSGLVKXXXXXXXXXXXXXXXXXXXXXHFSLRX 182
           TFLRQR+EARLA LLME+KEYS+ALTLLSGLVK                     HFSL+ 
Sbjct: 122 TFLRQRIEARLATLLMESKEYSQALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSLKN 181

Query: 183 XXXXXXXXXXXXXXXXXIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALE 242
                            IYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALE
Sbjct: 182 LPKAKAALTAARTAANAIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALE 241

Query: 243 DPKAVFSLKYMLLCKIMVNQADDVGGIISSKAGLQYVGPDLDAMKAVADAHSKRSLKLFE 302
           DPKAVFSLKYMLLCKIMV+QADDV GIISSKAGLQY+GPDLDAMKAVADAHSKRSLKLFE
Sbjct: 242 DPKAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYLGPDLDAMKAVADAHSKRSLKLFE 301

Query: 303 TALRNYKAQLEEDPIVHRHLQSLYGTLMEQNLCRLIEPFSRVEIAHIAELIELPIDHVER 362
           TALR++KAQL +DPIVHRHL SLY TL+EQNLCRLIEPFSRVEIAHIAELIELPIDHVER
Sbjct: 302 TALRDFKAQLGDDPIVHRHLTSLYDTLLEQNLCRLIEPFSRVEIAHIAELIELPIDHVER 361

Query: 363 KLSQMILDKKFAGTLDQGAGCLIIFDDPKTDAIYPATLETISNIGKVVDSLYVRSAKIM 421
           K+SQMILDKKFAGTLDQGAGCL+IFDDPKTDAIYPATLETISN+GKVVDSL+VRSAKIM
Sbjct: 362 KMSQMILDKKFAGTLDQGAGCLVIFDDPKTDAIYPATLETISNVGKVVDSLFVRSAKIM 420


>Medtr1g009010.1 | 26S proteasome non-ATPase regulatory subunit-like
           protein | HC | chr1:1145771-1141945 | 20130731
          Length = 421

 Score =  707 bits (1826), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/419 (83%), Positives = 369/419 (88%)

Query: 3   SSYLPATTESVALALEAKDPSEGISILYRVLEDPSSSPEALRMKEQAITNLTDLLRQENR 62
           SS+LPATTES+A ALEAKDPSE ISILYRVL DPSSSP+ALRMKEQAITNLTDLLRQENR
Sbjct: 2   SSFLPATTESIAQALEAKDPSESISILYRVLGDPSSSPDALRMKEQAITNLTDLLRQENR 61

Query: 63  GEDLRSLLTQLRPFFSLIPKAKTAKIVRGIIDSVAKIPGSSDLQIALCKEMVQWTRAEKR 122
            EDLRSLLTQLR FFSLIPKAKTAKIVRGIIDSVAKIPG+S+LQI+LCKEMVQWTR EKR
Sbjct: 62  AEDLRSLLTQLRSFFSLIPKAKTAKIVRGIIDSVAKIPGTSELQISLCKEMVQWTRDEKR 121

Query: 123 TFLRQRVEARLAALLMETKEYSEALTLLSGLVKXXXXXXXXXXXXXXXXXXXXXHFSLRX 182
           TFLRQR+EARLA LLME+KEYS+ALTLLSGLVK                     HFSL+ 
Sbjct: 122 TFLRQRIEARLATLLMESKEYSQALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSLKN 181

Query: 183 XXXXXXXXXXXXXXXXXIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALE 242
                            IYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALE
Sbjct: 182 LPKAKAALTAARTAANAIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALE 241

Query: 243 DPKAVFSLKYMLLCKIMVNQADDVGGIISSKAGLQYVGPDLDAMKAVADAHSKRSLKLFE 302
           DPKAVFSLKYMLLCKIMV+QADDV GIISSKAGLQY+GPDLDAMKAVADAHSKRSLKLFE
Sbjct: 242 DPKAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYLGPDLDAMKAVADAHSKRSLKLFE 301

Query: 303 TALRNYKAQLEEDPIVHRHLQSLYGTLMEQNLCRLIEPFSRVEIAHIAELIELPIDHVER 362
           TALR++KAQL +DPIVHRHL SLY TL+EQNLCRLIEPFSRVEIAHIAELIELPIDHVER
Sbjct: 302 TALRDFKAQLGDDPIVHRHLTSLYDTLLEQNLCRLIEPFSRVEIAHIAELIELPIDHVER 361

Query: 363 KLSQMILDKKFAGTLDQGAGCLIIFDDPKTDAIYPATLETISNIGKVVDSLYVRSAKIM 421
           K+SQMILDKKFAGTLDQGAGCL+IFDDPKTDAIYPATLETISN+GKVVDSL+VRSAKIM
Sbjct: 362 KMSQMILDKKFAGTLDQGAGCLVIFDDPKTDAIYPATLETISNVGKVVDSLFVRSAKIM 420


>Medtr7g087530.1 | COP9 signalosome complex subunit 2 | HC |
           chr7:34082872-34089043 | 20130731
          Length = 439

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 2/176 (1%)

Query: 204 PAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALEDPKAVFSLKYMLLCKIMVNQA 263
           P   G I    G +H  E+ +  A + FFEAF++++   + + +  LKY++L  +++   
Sbjct: 227 PRIMGIIHECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLM--E 284

Query: 264 DDVGGIISSKAGLQYVGPDLDAMKAVADAHSKRSLKLFETALRNYKAQLEEDPIVHRHLQ 323
            +V      +A      P++ AM  +  A+ +  +  FE  L++ +  + +DP +  +++
Sbjct: 285 SEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRTIMDDPFIRNYIE 344

Query: 324 SLYGTLMEQNLCRLIEPFSRVEIAHIAELIELPIDHVERKLSQMILDKKFAGTLDQ 379
            L   +  Q L +LI+P++R+ I  I++ + +P   VE+ L  +ILD +  G +DQ
Sbjct: 345 DLLKNIRTQVLLKLIKPYTRIRIPFISKELNVPEHDVEQLLVSLILDNRIQGHIDQ 400