Miyakogusa Predicted Gene

Lj1g3v1991490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1991490.1 Non Characterized Hit- tr|I1M0D7|I1M0D7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,57.45,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; DUF382,Domain of
unknown function DUF382;,CUFF.28240.1
         (354 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g013350.1 | splicing factor 3B subunit 2 | HC | chr2:35769...   322   5e-88
Medtr2g013350.2 | splicing factor 3B subunit 2 | HC | chr2:35774...   318   4e-87
Medtr2g013350.3 | splicing factor 3B subunit 2 | HC | chr2:35775...   318   6e-87
Medtr4g089085.1 | splicing factor 3B subunit 2 | HC | chr4:35697...   306   2e-83

>Medtr2g013350.1 | splicing factor 3B subunit 2 | HC |
           chr2:3576901-3585046 | 20130731
          Length = 578

 Score =  322 bits (824), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 184/315 (58%), Positives = 217/315 (68%), Gaps = 35/315 (11%)

Query: 8   ATVKKSPESDRCR---RKQKKNKASEEPWXXXXXXXXXXXXXXHVAEQFE-IXXXXXXXX 63
              KKS E+DR R   + +K NKASE+P                  + FE +        
Sbjct: 12  VVAKKSKENDRRRRRGKAKKNNKASEQPASNIGEESDNAKENTDPKQVFEQVEIEYVPEK 71

Query: 64  XXXXXXXXXXFRRIFTKFSFSDFAGSKDTGMK-----------KADSDTGSEEEDG---V 109
                     FR+IF KFSF++ A S++T  K           KA+SD+  E+E+     
Sbjct: 72  VDLYEGMDEEFRKIFEKFSFTEVAASEETDKKDVAEETAATKKKANSDSDYEDEENDNEQ 131

Query: 110 KEKGISNKKKKLQRRMKIAELKRICSRPDVVEVWDATASDPKLLVFLKSCRNTVPVPRHW 169
           KEKG+SNKKKKLQRRMKIAELK++ SRPDVVEVWDATA+DPKLLVFLKS RNTVPVPRHW
Sbjct: 132 KEKGVSNKKKKLQRRMKIAELKQVSSRPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHW 191

Query: 170 SRKRKFLQGKIGIEIEPFQLPEFVAATGIEKVR-----------LKQKQRE--PSKLGRM 216
           S+KRKFLQGK GIE +PFQLP+F+AATGIEK+R           LKQKQRE    K+G+M
Sbjct: 192 SQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKM 251

Query: 217 EIDYKVLHDAFFKYQRKPKLSSVGEVYHEGKEFEVKLREMKLKAGVLSHELKEALGMPEG 276
           +IDY+VLHDAFFKYQ KPKL+S+GE+YHEGKEFEVKLREM  K G+LSH+LKEALGMPEG
Sbjct: 252 DIDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREM--KPGMLSHDLKEALGMPEG 309

Query: 277 DELTPPWLINMQRYG 291
               PPWLINMQRYG
Sbjct: 310 --APPPWLINMQRYG 322


>Medtr2g013350.2 | splicing factor 3B subunit 2 | HC |
           chr2:3577473-3584784 | 20130731
          Length = 523

 Score =  318 bits (815), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 168/245 (68%), Positives = 195/245 (79%), Gaps = 31/245 (12%)

Query: 74  FRRIFTKFSFSDFAGSKDTGMK-----------KADSDTGSEEEDG---VKEKGISNKKK 119
           FR+IF KFSF++ A S++T  K           KA+SD+  E+E+     KEKG+SNKKK
Sbjct: 27  FRKIFEKFSFTEVAASEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVSNKKK 86

Query: 120 KLQRRMKIAELKRICSRPDVVEVWDATASDPKLLVFLKSCRNTVPVPRHWSRKRKFLQGK 179
           KLQRRMKIAELK++ SRPDVVEVWDATA+DPKLLVFLKS RNTVPVPRHWS+KRKFLQGK
Sbjct: 87  KLQRRMKIAELKQVSSRPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWSQKRKFLQGK 146

Query: 180 IGIEIEPFQLPEFVAATGIEKVR-----------LKQKQRE--PSKLGRMEIDYKVLHDA 226
            GIE +PFQLP+F+AATGIEK+R           LKQKQRE    K+G+M+IDY+VLHDA
Sbjct: 147 RGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDA 206

Query: 227 FFKYQRKPKLSSVGEVYHEGKEFEVKLREMKLKAGVLSHELKEALGMPEGDELTPPWLIN 286
           FFKYQ KPKL+S+GE+YHEGKEFEVKLREM  K G+LSH+LKEALGMPEG    PPWLIN
Sbjct: 207 FFKYQTKPKLTSLGELYHEGKEFEVKLREM--KPGMLSHDLKEALGMPEG--APPPWLIN 262

Query: 287 MQRYG 291
           MQRYG
Sbjct: 263 MQRYG 267


>Medtr2g013350.3 | splicing factor 3B subunit 2 | HC |
           chr2:3577560-3585046 | 20130731
          Length = 501

 Score =  318 bits (815), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 168/245 (68%), Positives = 195/245 (79%), Gaps = 31/245 (12%)

Query: 74  FRRIFTKFSFSDFAGSKDTGMK-----------KADSDTGSEEEDG---VKEKGISNKKK 119
           FR+IF KFSF++ A S++T  K           KA+SD+  E+E+     KEKG+SNKKK
Sbjct: 5   FRKIFEKFSFTEVAASEETDKKDVAEETAATKKKANSDSDYEDEENDNEQKEKGVSNKKK 64

Query: 120 KLQRRMKIAELKRICSRPDVVEVWDATASDPKLLVFLKSCRNTVPVPRHWSRKRKFLQGK 179
           KLQRRMKIAELK++ SRPDVVEVWDATA+DPKLLVFLKS RNTVPVPRHWS+KRKFLQGK
Sbjct: 65  KLQRRMKIAELKQVSSRPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWSQKRKFLQGK 124

Query: 180 IGIEIEPFQLPEFVAATGIEKVR-----------LKQKQRE--PSKLGRMEIDYKVLHDA 226
            GIE +PFQLP+F+AATGIEK+R           LKQKQRE    K+G+M+IDY+VLHDA
Sbjct: 125 RGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDA 184

Query: 227 FFKYQRKPKLSSVGEVYHEGKEFEVKLREMKLKAGVLSHELKEALGMPEGDELTPPWLIN 286
           FFKYQ KPKL+S+GE+YHEGKEFEVKLREM  K G+LSH+LKEALGMPEG    PPWLIN
Sbjct: 185 FFKYQTKPKLTSLGELYHEGKEFEVKLREM--KPGMLSHDLKEALGMPEG--APPPWLIN 240

Query: 287 MQRYG 291
           MQRYG
Sbjct: 241 MQRYG 245


>Medtr4g089085.1 | splicing factor 3B subunit 2 | HC |
           chr4:35697993-35706063 | 20130731
          Length = 579

 Score =  306 bits (783), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 161/243 (66%), Positives = 188/243 (77%), Gaps = 29/243 (11%)

Query: 74  FRRIFTKFSFSDFAGSKDTGMKKADSDTG------------SEEEDGVKEKGISNKKKKL 121
           F++IF KFSFS+   S+D   K   ++               E+++  KEKG+SNKKKKL
Sbjct: 95  FKKIFEKFSFSEVIDSEDNDKKDESAENAITKKKADSDSEEEEDDNEQKEKGVSNKKKKL 154

Query: 122 QRRMKIAELKRICSRPDVVEVWDATASDPKLLVFLKSCRNTVPVPRHWSRKRKFLQGKIG 181
           QRRMKIAELK+I +RPDVVEVWDAT++DPKLLVFLKS RNTVPVPRHW +KRKFLQGK G
Sbjct: 155 QRRMKIAELKQISARPDVVEVWDATSADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRG 214

Query: 182 IEIEPFQLPEFVAATGIEKVR-----------LKQKQRE--PSKLGRMEIDYKVLHDAFF 228
           IE +PFQLP+F+AATGIEK+R           LKQKQRE    K+G+M+IDY+VLHDAFF
Sbjct: 215 IEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFF 274

Query: 229 KYQRKPKLSSVGEVYHEGKEFEVKLREMKLKAGVLSHELKEALGMPEGDELTPPWLINMQ 288
           KYQ KPKLSS+G++YHEGKEFEVKLREM  K G+LSHELKEALGMPEG    PPWLINMQ
Sbjct: 275 KYQTKPKLSSLGDLYHEGKEFEVKLREM--KPGMLSHELKEALGMPEGS--PPPWLINMQ 330

Query: 289 RYG 291
           RYG
Sbjct: 331 RYG 333