Miyakogusa Predicted Gene

Lj1g3v1966220.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1966220.2 Non Characterized Hit- tr|B6SVE9|B6SVE9_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,32.62,5e-18,seg,NULL,CUFF.28215.2
         (592 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g108780.1 | hypothetical protein | HC | chr3:50248195-5025...   597   e-170
Medtr3g108780.2 | hypothetical protein | HC | chr3:50248195-5025...   593   e-169

>Medtr3g108780.1 | hypothetical protein | HC |
           chr3:50248195-50256401 | 20130731
          Length = 608

 Score =  597 bits (1539), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 351/618 (56%), Positives = 406/618 (65%), Gaps = 36/618 (5%)

Query: 1   MASISGSQLGGKKVXXXXXXXXXXXXXXXXXX--XXXXXSPNWLSRLVISPTRFIASGAG 58
           MASISGSQ GGK V                         SPNWLSR VISPTRFIASGAG
Sbjct: 1   MASISGSQSGGKMVRLRRTAVARNRTPYSRPSPPQPQLESPNWLSRFVISPTRFIASGAG 60

Query: 59  KILSTVLDLEXXXXXXXXXXXXXXXXXXXXXXEEVGPLDDENDNTFEGD----------- 107
           KIL++VLDLE                      E VG LDD + N F G+           
Sbjct: 61  KILTSVLDLESSPASSSSATSSSSSYQDSVAAE-VGELDDVSYNPFGGEAALKEGGTSKP 119

Query: 108 DDALNK---PLDGNEKSKHVIEQLLMQESFSREEGDRLIKIIRSRVVDSPTVNGDVDKRT 164
           +D  +K   PL  N KSK  IEQLLMQE+FSREEGDRLIKIIRSRVVDSP  N D   R 
Sbjct: 120 NDLSSKELQPLVANSKSKRAIEQLLMQETFSREEGDRLIKIIRSRVVDSP-ANDDRITRP 178

Query: 165 SDMAIRTXXXXXXXXXXXXVMEAKKWLQQKKSGIDSNSDLGHGSRSLNLVSSPQAPNGEG 224
            D++  T            VMEAKKW+ +KKSG+DSNSDLG+ S SLNL++ PQAP  EG
Sbjct: 179 RDISNMTLATGSPELCSAAVMEAKKWVLEKKSGLDSNSDLGYRSHSLNLIALPQAPKDEG 238

Query: 225 SPVDVAKLYMRARPPWASPSVDHNKPPTLSGIQLFKEETPHLFSGNSTSSSKLKRGSPAT 284
           SPVDVAK YMR+RPPW+SPS+DH KPPTLSGIQLFKEETPH+F GNSTSS K KR S AT
Sbjct: 239 SPVDVAKSYMRSRPPWSSPSIDHTKPPTLSGIQLFKEETPHIFGGNSTSSLKFKRDSSAT 298

Query: 285 GSWSIQDEIRRVRSRATEEMLRT-PSSKIDWSTFSMEHKNDVNSSAIENLGTSLGENAHN 343
           GSWSIQDEIRRVRSRATEEMLRT PSSKIDWS  + + +N+VNSSAIE++G   G   HN
Sbjct: 299 GSWSIQDEIRRVRSRATEEMLRTLPSSKIDWSALAAD-RNNVNSSAIEDIGARSGGKVHN 357

Query: 344 FTNLVDASASLATGLGSQAPSDLQNKMDGLQPKYVQADHPANFNSEQNQVSVAVEQTKGT 403
           FTNL D +A+LA+GLGSQ   DLQ+K+DG QP+ V  D PAN  SEQNQ  VAV +TKGT
Sbjct: 358 FTNL-DKTANLASGLGSQVIPDLQSKLDGHQPESVLPD-PANIISEQNQGFVAVPKTKGT 415

Query: 404 QEDCREVTTSGLRDGSSDDLHRDSGLLKVNGISDTNGSNHQLHSVEETGEALNSRLQDGN 463
           Q+DC E TTS LRDGSSD++HRD  L+KVNGI+D     HQ   VEET E  +SRLQDGN
Sbjct: 416 QDDCHETTTSVLRDGSSDNMHRDGNLVKVNGIND----KHQPGPVEETREVSDSRLQDGN 471

Query: 464 CLAFKEKVEAEDAVANGF----SSFHAGQVIEENTKTLDNKPSAVDASQERTTEGVLEQE 519
              FKEKV AEDA++NGF     S   G V E+N+KTL+N+PS V++SQER  +G LEQE
Sbjct: 472 LSEFKEKVGAEDALSNGFPSSGPSVCVGNVTEQNSKTLNNEPSTVNSSQERIAQGFLEQE 531

Query: 520 DCKQ---SMEMPGVVVNDPVAVKDDST--ATGXXXXXXXXXXXXXXXKGSQATPTSIANR 574
            CK    S E+P V V+  VA KD  +  ++                 G  ATPTSIANR
Sbjct: 532 TCKTSHGSTEVPDVSVDGIVASKDSGSQNSSSVQYEIQQNSSQPGSESGLVATPTSIANR 591

Query: 575 KGKRITRSTRKDRSRGVK 592
           K KR+ R  R+  S+GVK
Sbjct: 592 KSKRLARYNRRG-SKGVK 608


>Medtr3g108780.2 | hypothetical protein | HC |
           chr3:50248195-50256401 | 20130731
          Length = 606

 Score =  593 bits (1528), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 351/618 (56%), Positives = 406/618 (65%), Gaps = 38/618 (6%)

Query: 1   MASISGSQLGGKKVXXXXXXXXXXXXXXXXXX--XXXXXSPNWLSRLVISPTRFIASGAG 58
           MASISGSQ GGK V                         SPNWLSR VISPTRFIASGAG
Sbjct: 1   MASISGSQSGGKMVRLRRTAVARNRTPYSRPSPPQPQLESPNWLSRFVISPTRFIASGAG 60

Query: 59  KILSTVLDLEXXXXXXXXXXXXXXXXXXXXXXEEVGPLDDENDNTFEGD----------- 107
           KIL++VLDLE                      E VG LDD + N F G+           
Sbjct: 61  KILTSVLDLESSPASSSSATSSSSSYQDSVAAE-VGELDDVSYNPFGGEAALKEGGTSKP 119

Query: 108 DDALNK---PLDGNEKSKHVIEQLLMQESFSREEGDRLIKIIRSRVVDSPTVNGDVDKRT 164
           +D  +K   PL  N KSK  IEQLLMQE+FSREEGDRLIKIIRSRVVDSP  N D   R 
Sbjct: 120 NDLSSKELQPLVANSKSKRAIEQLLMQETFSREEGDRLIKIIRSRVVDSP-ANDDRITRP 178

Query: 165 SDMAIRTXXXXXXXXXXXXVMEAKKWLQQKKSGIDSNSDLGHGSRSLNLVSSPQAPNGEG 224
            D++  T            VMEAKKW+ +KKSG+DSNSDLG+ S SLNL++ PQAP  EG
Sbjct: 179 RDISNMTLATGSPELCSAAVMEAKKWVLEKKSGLDSNSDLGYRSHSLNLIALPQAPKDEG 238

Query: 225 SPVDVAKLYMRARPPWASPSVDHNKPPTLSGIQLFKEETPHLFSGNSTSSSKLKRGSPAT 284
           SPVDVAK YMR+RPPW+SPS+DH KPPTLSGIQLFKEETPH+F GNSTSS K KR S AT
Sbjct: 239 SPVDVAKSYMRSRPPWSSPSIDHTKPPTLSGIQLFKEETPHIFGGNSTSSLKFKRDSSAT 298

Query: 285 GSWSIQDEIRRVRSRATEEMLRT-PSSKIDWSTFSMEHKNDVNSSAIENLGTSLGENAHN 343
           GSWSIQDEIRRVRSRATEEMLRT PSSKIDWS  + + +N+VNSSAIE++G   G   HN
Sbjct: 299 GSWSIQDEIRRVRSRATEEMLRTLPSSKIDWSALAAD-RNNVNSSAIEDIGARSGGKVHN 357

Query: 344 FTNLVDASASLATGLGSQAPSDLQNKMDGLQPKYVQADHPANFNSEQNQVSVAVEQTKGT 403
           FTNL D +A+LA+GLGSQ   DLQ+K+DG QP+ V  D PAN  SEQNQ  VAV +TKGT
Sbjct: 358 FTNL-DKTANLASGLGSQVIPDLQSKLDGHQPESVLPD-PANIISEQNQGFVAVPKTKGT 415

Query: 404 QEDCREVTTSGLRDGSSDDLHRDSGLLKVNGISDTNGSNHQLHSVEETGEALNSRLQDGN 463
           Q+DC E TTS LRDGSSD++HRD  L+KVNGI+D     HQ   VEET E  +SRLQDGN
Sbjct: 416 QDDCHETTTSVLRDGSSDNMHRDGNLVKVNGIND----KHQPGPVEETRE--DSRLQDGN 469

Query: 464 CLAFKEKVEAEDAVANGF----SSFHAGQVIEENTKTLDNKPSAVDASQERTTEGVLEQE 519
              FKEKV AEDA++NGF     S   G V E+N+KTL+N+PS V++SQER  +G LEQE
Sbjct: 470 LSEFKEKVGAEDALSNGFPSSGPSVCVGNVTEQNSKTLNNEPSTVNSSQERIAQGFLEQE 529

Query: 520 DCKQ---SMEMPGVVVNDPVAVKDDST--ATGXXXXXXXXXXXXXXXKGSQATPTSIANR 574
            CK    S E+P V V+  VA KD  +  ++                 G  ATPTSIANR
Sbjct: 530 TCKTSHGSTEVPDVSVDGIVASKDSGSQNSSSVQYEIQQNSSQPGSESGLVATPTSIANR 589

Query: 575 KGKRITRSTRKDRSRGVK 592
           K KR+ R  R+  S+GVK
Sbjct: 590 KSKRLARYNRRG-SKGVK 606