Miyakogusa Predicted Gene

Lj1g3v1965110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1965110.1 Non Characterized Hit- tr|Q681Z9|Q681Z9_ARATH
Putative uncharacterized protein At4g31090
OS=Arabidop,50,0.000000000001,coiled-coil,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.28266.1
         (303 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g108690.1 | transmembrane protein, putative | HC | chr3:50...   405   e-113
Medtr3g108690.2 | transmembrane protein, putative | HC | chr3:50...   403   e-112
Medtr1g010010.1 | transmembrane protein, putative | HC | chr1:16...   343   1e-94

>Medtr3g108690.1 | transmembrane protein, putative | HC |
           chr3:50206323-50201807 | 20130731
          Length = 455

 Score =  405 bits (1040), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 212/304 (69%), Positives = 240/304 (78%), Gaps = 6/304 (1%)

Query: 4   DDKAVGEGGEKKETSPTXXXXXXXXXXXXXXFFSRIWNGIFRLHGDDFEKRLQHISKEEA 63
           DDKAV EG EKKETSPT              F SRIWNGIFRLHGDDFEKRL+HISKEEA
Sbjct: 3   DDKAVEEG-EKKETSPTATASGNVKKKRKG-FISRIWNGIFRLHGDDFEKRLKHISKEEA 60

Query: 64  TVMSRMSKRSRTWRRMCRNLIIFSVIFEVIAVSYAIMTTRSVDMNWKMRAIRVLPMFLLP 123
           TV++R+++RSR+ R+  RNLI+FSVIFEVIAV YAIMTTRSV ++WKMRAIRVLPMFLLP
Sbjct: 61  TVIARVTRRSRSRRQTSRNLIVFSVIFEVIAVGYAIMTTRSVGIDWKMRAIRVLPMFLLP 120

Query: 124 ALSSAAYSGFVSFTKICDRRDQKILDRLRAERQAKIDELKEKTNYYSTQQLIQRXXXXXX 183
           ALSSA YS F++FT++CDRRDQ IL++LRAERQAKIDELKEKTNYY+TQQLIQR      
Sbjct: 121 ALSSAVYSAFITFTRMCDRRDQNILEKLRAERQAKIDELKEKTNYYTTQQLIQRYDPDPA 180

Query: 184 XXXXXXXXXXXXXXXDSGLKVHMGDESKPNSA-TGKSNDIELVQSTGLRNRKQVH---SS 239
                          DSG++++MGDES  + A TGKSND+ELVQS+GLRNRKQV    +S
Sbjct: 181 AKAAAATVLASKLGADSGMRLYMGDESNLSGASTGKSNDVELVQSSGLRNRKQVQTRSTS 240

Query: 240 PGTTTTNFDEQQLVDSGGIDQTQTSEYNQLVVVEHQHPQSSTAQDGGWIARIAALLVGED 299
           PGT+T NF +QQL  SGG DQTQTSEYNQ  VVEH  PQSST QDGGWIARIAALLVGED
Sbjct: 241 PGTSTPNFADQQLAGSGGFDQTQTSEYNQHAVVEHHQPQSSTPQDGGWIARIAALLVGED 300

Query: 300 PTQS 303
           PTQS
Sbjct: 301 PTQS 304


>Medtr3g108690.2 | transmembrane protein, putative | HC |
           chr3:50206323-50201807 | 20130731
          Length = 320

 Score =  403 bits (1035), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 212/304 (69%), Positives = 240/304 (78%), Gaps = 6/304 (1%)

Query: 4   DDKAVGEGGEKKETSPTXXXXXXXXXXXXXXFFSRIWNGIFRLHGDDFEKRLQHISKEEA 63
           DDKAV EG EKKETSPT              F SRIWNGIFRLHGDDFEKRL+HISKEEA
Sbjct: 3   DDKAVEEG-EKKETSPTATASGNVKKKRKG-FISRIWNGIFRLHGDDFEKRLKHISKEEA 60

Query: 64  TVMSRMSKRSRTWRRMCRNLIIFSVIFEVIAVSYAIMTTRSVDMNWKMRAIRVLPMFLLP 123
           TV++R+++RSR+ R+  RNLI+FSVIFEVIAV YAIMTTRSV ++WKMRAIRVLPMFLLP
Sbjct: 61  TVIARVTRRSRSRRQTSRNLIVFSVIFEVIAVGYAIMTTRSVGIDWKMRAIRVLPMFLLP 120

Query: 124 ALSSAAYSGFVSFTKICDRRDQKILDRLRAERQAKIDELKEKTNYYSTQQLIQRXXXXXX 183
           ALSSA YS F++FT++CDRRDQ IL++LRAERQAKIDELKEKTNYY+TQQLIQR      
Sbjct: 121 ALSSAVYSAFITFTRMCDRRDQNILEKLRAERQAKIDELKEKTNYYTTQQLIQRYDPDPA 180

Query: 184 XXXXXXXXXXXXXXXDSGLKVHMGDESKPNSA-TGKSNDIELVQSTGLRNRKQVH---SS 239
                          DSG++++MGDES  + A TGKSND+ELVQS+GLRNRKQV    +S
Sbjct: 181 AKAAAATVLASKLGADSGMRLYMGDESNLSGASTGKSNDVELVQSSGLRNRKQVQTRSTS 240

Query: 240 PGTTTTNFDEQQLVDSGGIDQTQTSEYNQLVVVEHQHPQSSTAQDGGWIARIAALLVGED 299
           PGT+T NF +QQL  SGG DQTQTSEYNQ  VVEH  PQSST QDGGWIARIAALLVGED
Sbjct: 241 PGTSTPNFADQQLAGSGGFDQTQTSEYNQHAVVEHHQPQSSTPQDGGWIARIAALLVGED 300

Query: 300 PTQS 303
           PTQS
Sbjct: 301 PTQS 304


>Medtr1g010010.1 | transmembrane protein, putative | HC |
           chr1:1676321-1682368 | 20130731
          Length = 470

 Score =  343 bits (880), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 189/310 (60%), Positives = 219/310 (70%), Gaps = 8/310 (2%)

Query: 1   MADDDKAVGEGGEKKETSP----TXXXXXXXXXXXXXXFFSRIWNGIFRLHGDDFEKRLQ 56
           MA++      GGEKK T+     +              F SRIWN +FR + DDFEKRLQ
Sbjct: 1   MAEEKTVTTAGGEKKSTASDTVTSSTSPAGNGKKKRKGFVSRIWNFVFRSNKDDFEKRLQ 60

Query: 57  HISKEEATVMSRMSKRSRTWRRMCRNLIIFSVIFEVIAVSYAIMTTRSVDMNWKMRAIRV 116
            ISKEE +VM+RM+ RSR+WRR  R++I+FSV+FE+IAVSYAIMTTRS DMNWKMRAIRV
Sbjct: 61  CISKEETSVMTRMNNRSRSWRRTSRHIILFSVLFEIIAVSYAIMTTRSTDMNWKMRAIRV 120

Query: 117 LPMFLLPALSSAAYSGFVSFTKICDRRDQKILDRLRAERQAKIDELKEKTNYYSTQQLIQ 176
           LPMFLLPALSSAAYS FVSF ++CDRRDQKILDRLRAER+ KIDELKE+TNYY TQQLIQ
Sbjct: 121 LPMFLLPALSSAAYSTFVSFIRMCDRRDQKILDRLRAERKEKIDELKERTNYYVTQQLIQ 180

Query: 177 RXXXXXXXXXXXXXXXXXXXXXDSGLKVHMGDESKPNSATGKSNDIELVQSTGLRNRKQV 236
           +                     DSGLK++M DESK  +  GK+N++E VQS+GLRNRKQ 
Sbjct: 181 KYDTDPAAKAAAATSLASKLGADSGLKLYMEDESKSGAPAGKANNVEPVQSSGLRNRKQG 240

Query: 237 HSSP---GTTTTNFDEQQLVDSGGIDQTQTSEYNQLVVVEHQHPQSSTAQDGGWIARIAA 293
            +     GTTT N  +QQLV SGG DQTQT    Q VVVEH  PQSS    GGWIA+IAA
Sbjct: 241 QTQSTNLGTTTPNHTDQQLVASGG-DQTQTRVQKQPVVVEHHQPQSSNKYAGGWIAQIAA 299

Query: 294 LLVGEDPTQS 303
           LLVGEDP QS
Sbjct: 300 LLVGEDPLQS 309