Miyakogusa Predicted Gene

Lj1g3v1955040.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1955040.1 Non Characterized Hit- tr|I1MWJ8|I1MWJ8_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,81.82,5e-18,DUF1218,Protein of unknown function DUF1218;
seg,NULL,CUFF.28198.1
         (197 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g108630.1 | transmembrane protein, putative | HC | chr3:50...   281   3e-76
Medtr1g010110.1 | transmembrane protein, putative | HC | chr1:17...   221   4e-58
Medtr3g065530.1 | transmembrane protein, putative | LC | chr3:29...   167   7e-42
Medtr1g010180.1 | transmembrane protein, putative | HC | chr1:17...   117   8e-27

>Medtr3g108630.1 | transmembrane protein, putative | HC |
           chr3:50158969-50161016 | 20130731
          Length = 185

 Score =  281 bits (719), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 136/172 (79%), Positives = 153/172 (88%), Gaps = 1/172 (0%)

Query: 1   MALTIKQMALIVSLFGVLSFIFGVVAENKKPASGTPVTGKDGVTSCKFSSDPTVVLGYLS 60
           MA +IK MAL VSL G +SFI GV+AENKKPASGTP+  KDGVT CKF SDPTV LGYLS
Sbjct: 1   MAASIKHMALAVSLLGFVSFILGVIAENKKPASGTPIAVKDGVT-CKFPSDPTVALGYLS 59

Query: 61  VAFLLASTVAGYRSLFYPYKGQSVPQGVFFKNTSFLVFFNIAVFSTGLAAAMLLWPTITE 120
           VAFL+ASTV GY SLFYPY+G+SVPQGV FK+T+FLVFFNIA+FS+GLAA +LLWP ITE
Sbjct: 60  VAFLIASTVVGYLSLFYPYQGKSVPQGVLFKHTTFLVFFNIALFSSGLAATLLLWPVITE 119

Query: 121 QIHLTHKVHHELDYACPTAKTGLLGGGAFLSLDSCLFWLVALMLADNAREDY 172
           QIHL+ KVH + +YACPTAKTGL+GGGAFLSLDSCLFWLVALMLADNARED+
Sbjct: 120 QIHLSRKVHLDANYACPTAKTGLIGGGAFLSLDSCLFWLVALMLADNAREDH 171


>Medtr1g010110.1 | transmembrane protein, putative | HC |
           chr1:1747295-1745637 | 20130731
          Length = 193

 Score =  221 bits (562), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 113/173 (65%), Positives = 137/173 (79%), Gaps = 1/173 (0%)

Query: 1   MALTIKQMALIVSLFGVLSFIFGVVAENKKPASGTPVTGKDGVT-SCKFSSDPTVVLGYL 59
           M  T+KQM  IV++ GV+SF+ GV+AENKKPA+GTPV   D V+ +C++ SDPTVVLG L
Sbjct: 1   MVATVKQMGSIVTVCGVVSFVLGVIAENKKPAAGTPVPSNDRVSVTCRYPSDPTVVLGVL 60

Query: 60  SVAFLLASTVAGYRSLFYPYKGQSVPQGVFFKNTSFLVFFNIAVFSTGLAAAMLLWPTIT 119
           S  FL+ STV GY SLFYPYKG+ VPQG   K+  F  FFN+A+F+TGLAA  L+WPTIT
Sbjct: 61  STVFLIVSTVVGYMSLFYPYKGKIVPQGAMLKHFCFSAFFNVALFTTGLAAMFLIWPTIT 120

Query: 120 EQIHLTHKVHHELDYACPTAKTGLLGGGAFLSLDSCLFWLVALMLADNAREDY 172
           EQ+HLT  VH +++Y CPTAKTGL GGGAFLSLDS L WL+ALMLA+N REDY
Sbjct: 121 EQLHLTRNVHLDINYTCPTAKTGLFGGGAFLSLDSSLLWLIALMLANNVREDY 173


>Medtr3g065530.1 | transmembrane protein, putative | LC |
           chr3:29621601-29620134 | 20130731
          Length = 185

 Score =  167 bits (422), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 88/176 (50%), Positives = 113/176 (64%), Gaps = 5/176 (2%)

Query: 1   MALTIKQMALIVSLFGVLSFIFGVVAENKKPASGTPVTGKDGVTSCKFSSDPTVVLGYLS 60
           MALT+K+M+LIV +FGV+SFI G+V ENKKP  G  V  KD +  C + SDPTV  GY S
Sbjct: 1   MALTMKKMSLIVIMFGVISFILGIVGENKKPPMGVIVKEKDAMM-CNYPSDPTVAFGYSS 59

Query: 61  VAFLLASTVAGYRSLFYPYKGQSVPQGVFFKNTSFLVFFNIAVFSTGLAAAMLLWPTITE 120
           + FL+AS+  G  SLFY Y G SVP     K T+  +F  +A+     +     WPT+TE
Sbjct: 60  LGFLVASSCMGLISLFYSYNGTSVPPSALLKYTTLTIFLVLALAEPPNSQGRP-WPTVTE 118

Query: 121 QI---HLTHKVHHELDYACPTAKTGLLGGGAFLSLDSCLFWLVALMLADNAREDYL 173
           Q      ++ +   +   CPTAKTGL+G  AFLSL+S LFWL++LML  NAREDYL
Sbjct: 119 QYLWKSNSYSIRTSVKPDCPTAKTGLMGSAAFLSLNSSLFWLLSLMLVKNAREDYL 174


>Medtr1g010180.1 | transmembrane protein, putative | HC |
           chr1:1792069-1792751 | 20130731
          Length = 124

 Score =  117 bits (293), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 61/117 (52%), Positives = 74/117 (63%), Gaps = 5/117 (4%)

Query: 46  CKFSSDPTVVLGYLSVAFLLASTVAGYRSLFYPYKGQSVPQGVFFKNTSFLVFFNIAVFS 105
           C + SDPTVV GY S+ FL+AS++ G  S+FY Y G SVP    FK T+  VFF IA+  
Sbjct: 3   CNYPSDPTVVFGYSSIGFLVASSLMGLISIFYSYNGTSVPPSALFKYTTLSVFFIIALAC 62

Query: 106 TGLAAAMLLWPTITEQIHLTHKVHH-----ELDYACPTAKTGLLGGGAFLSLDSCLF 157
           + LA  M LWPT+TEQ H  H  H          ACPTAKTGL+G GAFL L+S L+
Sbjct: 63  SALAGVMTLWPTVTEQHHWRHNFHPANVSASTMPACPTAKTGLMGSGAFLCLNSSLY 119