Miyakogusa Predicted Gene

Lj1g3v1931430.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1931430.2 Non Characterized Hit- tr|I3SC69|I3SC69_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,86.9,0,SYNTAXIN
5,NULL; SYNTAXIN,NULL; no description,NULL; SNARE,Target SNARE
coiled-coil domain; Syntaxin,CUFF.28213.2
         (344 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g108160.1 | syntaxin of plants protein | HC | chr3:4998319...   382   e-106
Medtr3g108160.2 | syntaxin of plants protein | HC | chr3:4998319...   313   2e-85
Medtr5g093600.1 | syntaxin of plants protein | HC | chr5:4087882...   229   3e-60
Medtr5g093600.2 | syntaxin of plants protein | HC | chr5:4087882...   188   7e-48

>Medtr3g108160.1 | syntaxin of plants protein | HC |
           chr3:49983199-49979202 | 20130731
          Length = 336

 Score =  382 bits (982), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 212/333 (63%), Positives = 226/333 (67%), Gaps = 24/333 (7%)

Query: 1   MHVKSAQSSYRDRTHEFHSITERLKKXXXXXXXXXXXXXXXXXXXXXXX--------XIA 52
           M  KS+QSS+RDRTHEF ++ ERLKK                                +A
Sbjct: 1   MQFKSSQSSFRDRTHEFLTVAERLKKSVSSGSAPNGATTSAPSSSFPSSSRSDDPRSAVA 60

Query: 53  MQSEFNKRASKIGYGIHQTSQXXXXXXXXXXRTSVFDDPTMEIQELTSVIKQDITALNSA 112
           +QSEFN+RASKIGYGIHQTSQ          RTSVFDDPTMEIQELTSVIKQDITALNSA
Sbjct: 61  IQSEFNRRASKIGYGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTSVIKQDITALNSA 120

Query: 113 VVDLQLLSNSRNESGNXXXXXXXXXXXXXXXLKTRLMGATKEFKDVLTMRTENMKVHESR 172
           VVDLQL+SNSRNESGN               LKTRLM  TKEFKDVLTMRTEN+KVHE+R
Sbjct: 121 VVDLQLISNSRNESGNVSTDTTSHSTTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENR 180

Query: 173 RQLFSASASKDSANPFVRQRPLXXXXXXXXXXXXXXXXXXXXQSSSQLFPKKQVDGESQP 232
           RQLFSA+ASKDSANPF+RQRPL                      +      KQVDGESQP
Sbjct: 181 RQLFSANASKDSANPFIRQRPL----------ATKSAASTSSAPAPPWASGKQVDGESQP 230

Query: 233 LLXXXXXXXXXXXXIVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIR 292
           LL                QDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIR
Sbjct: 231 LLQQQQQQVVPL------QDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIR 284

Query: 293 IDENMDDTLANVEGAQGALLKYMNSISSNRWLM 325
           IDENMDDTLANVEGAQGALLKY+NSISSNRWLM
Sbjct: 285 IDENMDDTLANVEGAQGALLKYLNSISSNRWLM 317


>Medtr3g108160.2 | syntaxin of plants protein | HC |
           chr3:49983199-49979214 | 20130731
          Length = 301

 Score =  313 bits (801), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 180/301 (59%), Positives = 193/301 (64%), Gaps = 24/301 (7%)

Query: 1   MHVKSAQSSYRDRTHEFHSITERLKKXXXXXXXXXXXXXXXXXXXXXXX--------XIA 52
           M  KS+QSS+RDRTHEF ++ ERLKK                                +A
Sbjct: 1   MQFKSSQSSFRDRTHEFLTVAERLKKSVSSGSAPNGATTSAPSSSFPSSSRSDDPRSAVA 60

Query: 53  MQSEFNKRASKIGYGIHQTSQXXXXXXXXXXRTSVFDDPTMEIQELTSVIKQDITALNSA 112
           +QSEFN+RASKIGYGIHQTSQ          RTSVFDDPTMEIQELTSVIKQDITALNSA
Sbjct: 61  IQSEFNRRASKIGYGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTSVIKQDITALNSA 120

Query: 113 VVDLQLLSNSRNESGNXXXXXXXXXXXXXXXLKTRLMGATKEFKDVLTMRTENMKVHESR 172
           VVDLQL+SNSRNESGN               LKTRLM  TKEFKDVLTMRTEN+KVHE+R
Sbjct: 121 VVDLQLISNSRNESGNVSTDTTSHSTTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENR 180

Query: 173 RQLFSASASKDSANPFVRQRPLXXXXXXXXXXXXXXXXXXXXQSSSQLFPKKQVDGESQP 232
           RQLFSA+ASKDSANPF+RQRPL                      +      KQVDGESQP
Sbjct: 181 RQLFSANASKDSANPFIRQRPL----------ATKSAASTSSAPAPPWASGKQVDGESQP 230

Query: 233 LLXXXXXXXXXXXXIVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIR 292
           LL                QDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIR
Sbjct: 231 LLQQQQQQVVPL------QDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIR 284

Query: 293 I 293
            
Sbjct: 285 F 285


>Medtr5g093600.1 | syntaxin of plants protein | HC |
           chr5:40878820-40872415 | 20130731
          Length = 334

 Score =  229 bits (583), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 176/321 (54%), Gaps = 11/321 (3%)

Query: 8   SSYRDRTHEFHSITERLKKXXXXXXXXXXXXXXXXXXXXXXXXIAMQSEFNKRASKIGYG 67
           S+YRDRT EF S+TE LKK                           +S+FN++AS+IG G
Sbjct: 3   STYRDRTSEFRSLTETLKKIGGGGGGATAPPNQQPSTSQISYS---RSDFNRKASQIGLG 59

Query: 68  IHQTSQXXXXXXXXXXRTSVFDDPTMEIQELTSVIKQDITALNSAVVDLQLLSNSRNESG 127
           IH+TSQ          ++S+F+DP MEIQELT++IK DIT LNSAV+DLQ +        
Sbjct: 60  IHETSQKIARLAKLAKKSSMFNDPIMEIQELTALIKTDITTLNSAVLDLQNIQKIDLADE 119

Query: 128 NXXXXXXXXXXXXXXXLKTRLMGATKEFKDVLTMRTENMKVHESRRQLFSASASKDSANP 187
           N               LK RLMGATK  +DVLT RTEN+K HE+R+Q+FS +  +    P
Sbjct: 120 NYSEDRVVHSNAVCDDLKNRLMGATKHLQDVLTTRTENIKAHENRKQIFSKNPLQHQPKP 179

Query: 188 FVRQRPLXXXXXXXXXXXXXXXXXXXXQ---SSSQLFPKKQVDGESQPLLXXXXXXXXXX 244
                P                         + +QL  ++++  E+ P            
Sbjct: 180 TTEPPPWSNSTNAFETESLQQTSGLPSNGIPAGNQL--RRRLAVENTP---SQQMEMSLV 234

Query: 245 XXIVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRIDENMDDTLANV 304
             +VP  + Y QSRA AL NVESTI ELS IF  LAT+V+ QGE+AIRID+NMD++L NV
Sbjct: 235 QQVVPRHEDYAQSRASALHNVESTITELSGIFTHLATMVAHQGELAIRIDDNMDESLTNV 294

Query: 305 EGAQGALLKYMNSISSNRWLM 325
           EGA  +LL+++N ISSNRWLM
Sbjct: 295 EGAHSSLLRHLNRISSNRWLM 315


>Medtr5g093600.2 | syntaxin of plants protein | HC |
           chr5:40878820-40872452 | 20130731
          Length = 268

 Score =  188 bits (477), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 107/245 (43%), Positives = 141/245 (57%), Gaps = 8/245 (3%)

Query: 84  RTSVFDDPTMEIQELTSVIKQDITALNSAVVDLQLLSNSRNESGNXXXXXXXXXXXXXXX 143
           ++S+F+DP MEIQELT++IK DIT LNSAV+DLQ +        N               
Sbjct: 10  KSSMFNDPIMEIQELTALIKTDITTLNSAVLDLQNIQKIDLADENYSEDRVVHSNAVCDD 69

Query: 144 LKTRLMGATKEFKDVLTMRTENMKVHESRRQLFSASASKDSANPFVRQRPLXXXXXXXXX 203
           LK RLMGATK  +DVLT RTEN+K HE+R+Q+FS +  +    P     P          
Sbjct: 70  LKNRLMGATKHLQDVLTTRTENIKAHENRKQIFSKNPLQHQPKPTTEPPPWSNSTNAFET 129

Query: 204 XXXXXXXXXXXQ---SSSQLFPKKQVDGESQPLLXXXXXXXXXXXXIVPLQDSYMQSRAE 260
                          + +QL  ++++  E+ P              +VP  + Y QSRA 
Sbjct: 130 ESLQQTSGLPSNGIPAGNQL--RRRLAVENTP---SQQMEMSLVQQVVPRHEDYAQSRAS 184

Query: 261 ALQNVESTIHELSNIFNQLATLVSQQGEVAIRIDENMDDTLANVEGAQGALLKYMNSISS 320
           AL NVESTI ELS IF  LAT+V+ QGE+AIRID+NMD++L NVEGA  +LL+++N ISS
Sbjct: 185 ALHNVESTITELSGIFTHLATMVAHQGELAIRIDDNMDESLTNVEGAHSSLLRHLNRISS 244

Query: 321 NRWLM 325
           NRWLM
Sbjct: 245 NRWLM 249