Miyakogusa Predicted Gene

Lj1g3v1931430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1931430.1 Non Characterized Hit- tr|I3SC69|I3SC69_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.84,0,SYNTAXIN
5,NULL; SYNTAXIN,NULL; no description,NULL; SNARE,Target SNARE
coiled-coil domain; Syntaxin,CUFF.28213.1
         (345 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g108160.1 | syntaxin of plants protein | HC | chr3:4998319...   405   e-113
Medtr3g108160.2 | syntaxin of plants protein | HC | chr3:4998319...   337   1e-92
Medtr5g093600.1 | syntaxin of plants protein | HC | chr5:4087882...   225   4e-59
Medtr5g093600.2 | syntaxin of plants protein | HC | chr5:4087882...   197   1e-50

>Medtr3g108160.1 | syntaxin of plants protein | HC |
           chr3:49983199-49979202 | 20130731
          Length = 336

 Score =  405 bits (1041), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/331 (70%), Positives = 246/331 (74%), Gaps = 21/331 (6%)

Query: 1   MKSAQSSFRDRTHEFQNIAERLKKS---GSGPNGPXXXXXXXXXXXXXXXXXX--XXXMQ 55
            KS+QSSFRDRTHEF  +AERLKKS   GS PNG                        +Q
Sbjct: 3   FKSSQSSFRDRTHEFLTVAERLKKSVSSGSAPNGATTSAPSSSFPSSSRSDDPRSAVAIQ 62

Query: 56  SEFNKRASKIGYGIHXXXXXXXXXXXXXXXXXVFDDPTMEIQELTSVIKQDITALNSAVV 115
           SEFN+RASKIGYGIH                 VFDDPTMEIQELTSVIKQDITALNSAVV
Sbjct: 63  SEFNRRASKIGYGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTSVIKQDITALNSAVV 122

Query: 116 DLQLVSNSRNESGNASADTTSHSFTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQ 175
           DLQL+SNSRNESGN S DTTSHS TVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQ
Sbjct: 123 DLQLISNSRNESGNVSTDTTSHSTTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQ 182

Query: 176 LFSSSASKESANPFVRQRPLATRTAASESNAPAPPWAXXXXXXXXXQLFPKKQVDGESXX 235
           LFS++ASK+SANPF+RQRPLAT++AAS S+APAPPWA              KQVDGES  
Sbjct: 183 LFSANASKDSANPFIRQRPLATKSAASTSSAPAPPWA------------SGKQVDGES-- 228

Query: 236 XXXXXXXXXXXXXXXXXDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRID 295
                            DSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRID
Sbjct: 229 --QPLLQQQQQQVVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRID 286

Query: 296 ENMDDTLANVEGAQGALLKYMNSISSNRWLM 326
           ENMDDTLANVEGAQGALLKY+NSISSNRWLM
Sbjct: 287 ENMDDTLANVEGAQGALLKYLNSISSNRWLM 317


>Medtr3g108160.2 | syntaxin of plants protein | HC |
           chr3:49983199-49979214 | 20130731
          Length = 301

 Score =  337 bits (863), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 201/299 (67%), Positives = 213/299 (71%), Gaps = 21/299 (7%)

Query: 1   MKSAQSSFRDRTHEFQNIAERLKKS---GSGPNGPXXXXXXXXXXXXXXXXXX--XXXMQ 55
            KS+QSSFRDRTHEF  +AERLKKS   GS PNG                        +Q
Sbjct: 3   FKSSQSSFRDRTHEFLTVAERLKKSVSSGSAPNGATTSAPSSSFPSSSRSDDPRSAVAIQ 62

Query: 56  SEFNKRASKIGYGIHXXXXXXXXXXXXXXXXXVFDDPTMEIQELTSVIKQDITALNSAVV 115
           SEFN+RASKIGYGIH                 VFDDPTMEIQELTSVIKQDITALNSAVV
Sbjct: 63  SEFNRRASKIGYGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTSVIKQDITALNSAVV 122

Query: 116 DLQLVSNSRNESGNASADTTSHSFTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQ 175
           DLQL+SNSRNESGN S DTTSHS TVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQ
Sbjct: 123 DLQLISNSRNESGNVSTDTTSHSTTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQ 182

Query: 176 LFSSSASKESANPFVRQRPLATRTAASESNAPAPPWAXXXXXXXXXQLFPKKQVDGESXX 235
           LFS++ASK+SANPF+RQRPLAT++AAS S+APAPPWA              KQVDGES  
Sbjct: 183 LFSANASKDSANPFIRQRPLATKSAASTSSAPAPPWASG------------KQVDGES-- 228

Query: 236 XXXXXXXXXXXXXXXXXDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRI 294
                            DSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIR 
Sbjct: 229 --QPLLQQQQQQVVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRF 285


>Medtr5g093600.1 | syntaxin of plants protein | HC |
           chr5:40878820-40872415 | 20130731
          Length = 334

 Score =  225 bits (574), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 137/337 (40%), Positives = 178/337 (52%), Gaps = 40/337 (11%)

Query: 6   SSFRDRTHEFQNIAERLKK-------SGSGPNGPXXXXXXXXXXXXXXXXXXXXXMQSEF 58
           S++RDRT EF+++ E LKK       + + PN                        +S+F
Sbjct: 3   STYRDRTSEFRSLTETLKKIGGGGGGATAPPN-------------QQPSTSQISYSRSDF 49

Query: 59  NKRASKIGYGIHXXXXXXXXXXXXXXXXXVFDDPTMEIQELTSVIKQDITALNSAVVDLQ 118
           N++AS+IG GIH                 +F+DP MEIQELT++IK DIT LNSAV+DLQ
Sbjct: 50  NRKASQIGLGIHETSQKIARLAKLAKKSSMFNDPIMEIQELTALIKTDITTLNSAVLDLQ 109

Query: 119 LVSNSRNESGNASADTTSHSFTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQLFS 178
            +        N S D   HS  V DDLK RLM  TK  +DVLT RTEN+K HENR+Q+FS
Sbjct: 110 NIQKIDLADENYSEDRVVHSNAVCDDLKNRLMGATKHLQDVLTTRTENIKAHENRKQIFS 169

Query: 179 SSASKESANPFVRQRPLATRTAASE-------SNAPA--PPWAXXXXXXXXXQLFPKKQV 229
            +  +    P     P +  T A E       S  P+   P           +  P +Q+
Sbjct: 170 KNPLQHQPKPTTEPPPWSNSTNAFETESLQQTSGLPSNGIPAGNQLRRRLAVENTPSQQM 229

Query: 230 DGESXXXXXXXXXXXXXXXXXXXDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGE 289
           +                      + Y QSRA AL NVESTI ELS IF  LAT+V+ QGE
Sbjct: 230 E-----------MSLVQQVVPRHEDYAQSRASALHNVESTITELSGIFTHLATMVAHQGE 278

Query: 290 VAIRIDENMDDTLANVEGAQGALLKYMNSISSNRWLM 326
           +AIRID+NMD++L NVEGA  +LL+++N ISSNRWLM
Sbjct: 279 LAIRIDDNMDESLTNVEGAHSSLLRHLNRISSNRWLM 315


>Medtr5g093600.2 | syntaxin of plants protein | HC |
           chr5:40878820-40872452 | 20130731
          Length = 268

 Score =  197 bits (501), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/248 (45%), Positives = 143/248 (57%), Gaps = 20/248 (8%)

Query: 88  VFDDPTMEIQELTSVIKQDITALNSAVVDLQLVSNSRNESGNASADTTSHSFTVVDDLKT 147
           +F+DP MEIQELT++IK DIT LNSAV+DLQ +        N S D   HS  V DDLK 
Sbjct: 13  MFNDPIMEIQELTALIKTDITTLNSAVLDLQNIQKIDLADENYSEDRVVHSNAVCDDLKN 72

Query: 148 RLMSTTKEFKDVLTMRTENLKVHENRRQLFSSSASKESANPFVRQRPLATRTAASE---- 203
           RLM  TK  +DVLT RTEN+K HENR+Q+FS +  +    P     P +  T A E    
Sbjct: 73  RLMGATKHLQDVLTTRTENIKAHENRKQIFSKNPLQHQPKPTTEPPPWSNSTNAFETESL 132

Query: 204 ---SNAPA--PPWAXXXXXXXXXQLFPKKQVDGESXXXXXXXXXXXXXXXXXXXDSYMQS 258
              S  P+   P           +  P +Q++                      + Y QS
Sbjct: 133 QQTSGLPSNGIPAGNQLRRRLAVENTPSQQME-----------MSLVQQVVPRHEDYAQS 181

Query: 259 RAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRIDENMDDTLANVEGAQGALLKYMNS 318
           RA AL NVESTI ELS IF  LAT+V+ QGE+AIRID+NMD++L NVEGA  +LL+++N 
Sbjct: 182 RASALHNVESTITELSGIFTHLATMVAHQGELAIRIDDNMDESLTNVEGAHSSLLRHLNR 241

Query: 319 ISSNRWLM 326
           ISSNRWLM
Sbjct: 242 ISSNRWLM 249