Miyakogusa Predicted Gene

Lj1g3v1930240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1930240.1 Non Characterized Hit- tr|C6SXN0|C6SXN0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32074 PE,70.15,4e-18,
,NODE_42115_length_221_cov_358.755646.path1.1
         (68 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g009280.1 | GroES chaperonin | HC | chr8:2101157-2105141 |...   104   2e-23

>Medtr8g009280.1 | GroES chaperonin | HC | chr8:2101157-2105141 |
          20130731
          Length = 135

 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/69 (75%), Positives = 60/69 (86%), Gaps = 5/69 (7%)

Query: 1  MASTFVTLPT-PFLHKTSTSVPSTSFSNKRLPFLKRNSLKVNAVATKWEPAKVVPQADRV 59
          MASTF+T+PT PFLHKT    P+ SFS +RLP LKRNSLKVNA+A KWEP+KVVPQADRV
Sbjct: 1  MASTFLTIPTTPFLHKT----PTASFSTQRLPILKRNSLKVNAIAKKWEPSKVVPQADRV 56

Query: 60 LIRLEELAQ 68
          LIRLEEL++
Sbjct: 57 LIRLEELSE 65