Miyakogusa Predicted Gene

Lj1g3v1930230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1930230.1 Non Characterized Hit- tr|I1K8G4|I1K8G4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56746 PE,50,1e-17,
,NODE_39470_length_1005_cov_25.600000.path1.1
         (225 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g009260.1 | ferredoxin-like protein | HC | chr8:2093925-20...   361   e-100
Medtr3g105080.1 | ferredoxin-like protein | HC | chr3:48449600-4...   180   8e-46

>Medtr8g009260.1 | ferredoxin-like protein | HC |
           chr8:2093925-2090866 | 20130731
          Length = 223

 Score =  361 bits (927), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/225 (84%), Positives = 203/225 (90%), Gaps = 2/225 (0%)

Query: 1   MMKNKLSCSVLHFFTCLLLPALVFSHHTHGNPANDIVDIINKNRTDQKLPHLNDSPGLGC 60
           MMKN LSC +L+F  CLLLP LVFSH THGNPA +IVDI+NKNRTDQKL +LNDSPGLGC
Sbjct: 1   MMKNNLSCGLLYFLFCLLLPPLVFSH-THGNPATEIVDILNKNRTDQKLHNLNDSPGLGC 59

Query: 61  MALQYVELCKGNCTDNNVVNCKPPEDDFTEVFAPNCGVELPTFGTITGHIVGCQKKYLEP 120
           MALQYVELCKGNCTDNNVVNCKPPEDDF EVFAPNCG+ELPTFGTITGHIVGCQ+KYLEP
Sbjct: 60  MALQYVELCKGNCTDNNVVNCKPPEDDFVEVFAPNCGIELPTFGTITGHIVGCQRKYLEP 119

Query: 121 PLAFSEVLIKDKKSLSLLTNKSHTEVGVGLVGLHNKGPFFWCVLFSNGNTNSSFVLENRG 180
            LAFS++LIKDKKSLSLL NKSHTEVGVGLVGLH KGPFFWCVLF++G  NS+FVLENRG
Sbjct: 120 SLAFSQILIKDKKSLSLLRNKSHTEVGVGLVGLHKKGPFFWCVLFTDGKANSTFVLENRG 179

Query: 181 AGIHQKKGCYSGSNTTCSGGQKSSGVAYCNVFFICYVFILLFKLL 225
           AGI QKKGCYSGSNT CS GQK  GV+  N FF+CYVFILLFKLL
Sbjct: 180 AGIKQKKGCYSGSNTPCSRGQK-HGVSSSNFFFMCYVFILLFKLL 223


>Medtr3g105080.1 | ferredoxin-like protein | HC |
           chr3:48449600-48452552 | 20130731
          Length = 229

 Score =  180 bits (457), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 89/183 (48%), Positives = 116/183 (63%), Gaps = 2/183 (1%)

Query: 31  NPANDIVDIINKNRTDQKLPHLNDSPGLGCMALQYVELCKGNCTDNNVVNCK-PPEDDFT 89
           NPA+ +V  IN+NRT  K   L D+PGL C+ALQY++  +G+C      + K PPE  F 
Sbjct: 34  NPADKLVAAINENRTAHKDSSLFDNPGLACLALQYIKAYQGDCGAVGGSDAKKPPESQFA 93

Query: 90  EVFAPNCGVELPTFGTITGHIVGCQKKYLEPPLAFSEVLIKDKKSLSLLTNKSHTEVGVG 149
           E FAPNCGV+  T   ITG  +GCQ KY+  P AFSE+LI+++KSL +L +K+HT+VG  
Sbjct: 94  EAFAPNCGVKASTLARITGRFLGCQTKYVHAPEAFSEILIRNEKSLDILYSKNHTQVGAA 153

Query: 150 LVGLHNKGPFFWCVLFSNGNTNSSFVLENRGAGIHQKKGCYSGSNTTCSGGQKSSGVAYC 209
           + G     P+FWCVLFSNG  NS+F  E  G     K GCYSG+N  CSG    S V+  
Sbjct: 154 VTGTDGGSPYFWCVLFSNGKPNSTFAFEG-GVAKDTKPGCYSGANDVCSGAHVWSPVSLM 212

Query: 210 NVF 212
            +F
Sbjct: 213 WLF 215