Miyakogusa Predicted Gene

Lj1g3v1915000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1915000.1 Non Characterized Hit- tr|I1JUH0|I1JUH0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36435
PE,62.65,0.00000000001,seg,NULL,BW626526.path1.1
         (83 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g107880.1 | phosphatase 2C family protein | HC | chr3:4977...    85   2e-17
Medtr3g107880.3 | phosphatase 2C family protein | HC | chr3:4977...    80   4e-16

>Medtr3g107880.1 | phosphatase 2C family protein | HC |
          chr3:49778302-49775982 | 20130731
          Length = 380

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 54/83 (65%), Gaps = 4/83 (4%)

Query: 1  MEESEGVNCFXXXXXXXXXXXXXXXXXXXIASAYRQCQRSDPAVLHCRKSLVRHASLTTI 60
          MEE EGVNCF                   IASA+RQCQR+DP VL CRKSLVRHASLT +
Sbjct: 1  MEEIEGVNCFSEGRSSSETRPPNPNSS--IASAFRQCQRNDPLVLPCRKSLVRHASLTKM 58

Query: 61 KLSEVCSEPGNVTEDCQSDFLTK 83
          KLS+V +E  +VTE  QSDFL K
Sbjct: 59 KLSDVSAE--DVTEGFQSDFLPK 79


>Medtr3g107880.3 | phosphatase 2C family protein | HC |
          chr3:49778302-49775982 | 20130731
          Length = 381

 Score = 80.1 bits (196), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/84 (57%), Positives = 54/84 (64%), Gaps = 5/84 (5%)

Query: 1  MEESEGVNCFXXXXXXXXXXXXXXXXXXXIASAYRQCQRSDPAVLHCRKSLVRHASL-TT 59
          MEE EGVNCF                   IASA+RQCQR+DP VL CRKSLVRHASL T 
Sbjct: 1  MEEIEGVNCFSEGRSSSETRPPNPNSS--IASAFRQCQRNDPLVLPCRKSLVRHASLQTK 58

Query: 60 IKLSEVCSEPGNVTEDCQSDFLTK 83
          +KLS+V +E  +VTE  QSDFL K
Sbjct: 59 MKLSDVSAE--DVTEGFQSDFLPK 80