Miyakogusa Predicted Gene

Lj1g3v1911740.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1911740.2 Non Characterized Hit- tr|D8RRM1|D8RRM1_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,63.24,8e-18,DnaJ/Hsp40 cysteine-rich domain,Heat shock
protein DnaJ, cysteine-rich domain; no description,Heat s,CUFF.28110.2
         (131 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g107397.1 | chaperon protein P13.9, putative | HC | chr3:4...   189   5e-49
Medtr4g114180.1 | chaperon protein P13.9, putative | HC | chr4:4...   110   4e-25
Medtr3g105830.1 | Tsi1-interacting protein TSIP1 | HC | chr3:488...    46   1e-05

>Medtr3g107397.1 | chaperon protein P13.9, putative | HC |
           chr3:49547475-49546235 | 20130731
          Length = 140

 Score =  189 bits (481), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 98/141 (69%), Positives = 109/141 (77%), Gaps = 11/141 (7%)

Query: 1   MVPSLCLTP----------RSSPTLGHPQQLETHKKQKHCIRVNRLFQGPPTDKFSFLTA 50
           MV +LCLTP          ++S   G      T+  +KH  RVN  FQGPPT+K+  +TA
Sbjct: 1   MVSALCLTPSCLGTKIFCVQTSECSGLNITSHTNTNRKH-FRVNYGFQGPPTEKYCLVTA 59

Query: 51  KAANGNQQNTKPNSVICADCDGNGAVVCSQCKGNGVNSVDIFNGQFKAGDSCWLCGGRKE 110
           KA N NQQNTKPNSVICADCDGNGA+VCSQCKG+GVNSVDIF+G FKAG SCWLCGGRKE
Sbjct: 60  KATNDNQQNTKPNSVICADCDGNGAIVCSQCKGSGVNSVDIFDGLFKAGASCWLCGGRKE 119

Query: 111 MLCGNCNGAGFIGGFLSTYDQ 131
           MLCGNCNGAGFIGGFLSTYDQ
Sbjct: 120 MLCGNCNGAGFIGGFLSTYDQ 140


>Medtr4g114180.1 | chaperon protein P13.9, putative | HC |
           chr4:47039776-47042488 | 20130731
          Length = 133

 Score =  110 bits (274), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 52/87 (59%), Positives = 68/87 (78%), Gaps = 1/87 (1%)

Query: 45  FSFLTAKAA-NGNQQNTKPNSVICADCDGNGAVVCSQCKGNGVNSVDIFNGQFKAGDSCW 103
           F  L  KA  + ++  TK  S++CADC GNGA  C+QC+G+GVN +D FNG+FKAG  CW
Sbjct: 46  FQSLVVKATEDSSKGTTKVKSIVCADCTGNGAKECTQCQGSGVNLIDHFNGRFKAGGLCW 105

Query: 104 LCGGRKEMLCGNCNGAGFIGGFLSTYD 130
           LC G+K++LCG+CNGAGFIGGF+ST+D
Sbjct: 106 LCRGKKDILCGSCNGAGFIGGFMSTFD 132


>Medtr3g105830.1 | Tsi1-interacting protein TSIP1 | HC |
           chr3:48817527-48815451 | 20130731
          Length = 144

 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 9/126 (7%)

Query: 7   LTPRSSPTLGHP----QQLETHKKQKHCIRVNRLFQGPPTDKFSFLTAKAANGNQQNTKP 62
           L P+S+P +       +   T++  + C+RV+       +  F+    +A   +QQ   P
Sbjct: 16  LIPKSTPPIAVVFCGNRSFVTNRISRLCVRVSMFDSSSSSSDFTKRMEQAWLISQQ---P 72

Query: 63  NSVICADCDGNGAVVCSQCKGNG--VNSVDIFNGQFKAGDSCWLCGGRKEMLCGNCNGAG 120
             V+C+ C   G + C  C G G  V   ++         SC +C G+    C NC G G
Sbjct: 73  RPVVCSSCSSKGHIECKWCGGTGFFVLGDNMLCEVPSRNTSCIICSGQGSTCCSNCQGTG 132

Query: 121 FIGGFL 126
           F   +L
Sbjct: 133 FRAKWL 138