Miyakogusa Predicted Gene

Lj1g3v1911640.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1911640.2 tr|Q0E301|Q0E301_ORYSJ Os02g0201000 protein
OS=Oryza sativa subsp. japonica GN=Os02g0201000 PE=4
SV=,57.45,8e-19,DUF4050,Domain of unknown function
DUF4050,CUFF.28111.2
         (159 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g107310.1 | DUF4050 family protein | HC | chr3:49505990-49...   156   7e-39
Medtr3g107310.3 | DUF4050 family protein | HC | chr3:49505871-49...   142   2e-34
Medtr4g010330.1 | DUF4050 family protein | HC | chr4:2343778-233...   142   2e-34
Medtr4g010330.2 | DUF4050 family protein | HC | chr4:2343778-233...   132   2e-31
Medtr3g107310.2 | DUF4050 family protein | HC | chr3:49505990-49...   114   3e-26
Medtr4g010330.3 | DUF4050 family protein | HC | chr4:2343778-233...   104   4e-23
Medtr4g114620.1 | DUF4050 family protein | HC | chr4:47144929-47...   104   4e-23
Medtr1g012480.5 | DUF4050 family protein | HC | chr1:2486601-248...   102   2e-22
Medtr1g012480.4 | DUF4050 family protein | HC | chr1:2486596-248...    92   1e-19
Medtr1g012480.3 | DUF4050 family protein | HC | chr1:2486838-248...    92   1e-19
Medtr1g012480.8 | DUF4050 family protein | HC | chr1:2486601-248...    92   1e-19
Medtr1g012480.2 | DUF4050 family protein | HC | chr1:2486601-248...    92   1e-19
Medtr1g012480.1 | DUF4050 family protein | HC | chr1:2486581-248...    92   1e-19
Medtr4g114620.2 | DUF4050 family protein | HC | chr4:47144929-47...    91   4e-19
Medtr1g012480.6 | DUF4050 family protein | HC | chr1:2486601-248...    62   3e-10
Medtr1g012480.7 | DUF4050 family protein | HC | chr1:2486601-248...    62   3e-10
Medtr1g094145.2 | DUF4050 family protein | HC | chr1:42325452-42...    54   6e-08
Medtr1g094145.1 | DUF4050 family protein | HC | chr1:42324612-42...    54   6e-08

>Medtr3g107310.1 | DUF4050 family protein | HC |
           chr3:49505990-49502026 | 20130731
          Length = 176

 Score =  156 bits (395), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 92/140 (65%), Positives = 106/140 (75%), Gaps = 6/140 (4%)

Query: 13  GCLGCFPKP--ISMDEA--SKGLITQGSAINNYDRSEDI-WSSSSFYMDHSAGYSQRSFS 67
           GCLGCF KP  ISM EA  SKGL TQ   +NN +RS+D  WSSS+  +DH A  SQRS S
Sbjct: 21  GCLGCFSKPLVISMGEADASKGLKTQAQTMNNDNRSDDFFWSSSAIELDHGAIQSQRSIS 80

Query: 68  SITIPNHPSDPQSSAGNQIDHPEEFVNHGLRLWKQTRKQWVGNKKTERRMQVGESRISWN 127
           SI++ NHPSDPQSS G Q D PE FVNHGL LW QTR+QWVGNK++ R  QVGE ++SWN
Sbjct: 81  SISVSNHPSDPQSSDGIQTDSPE-FVNHGLLLWNQTRQQWVGNKRSGRPKQVGEPKLSWN 139

Query: 128 ATYESLLGTTRPFRQPIPLG 147
           ATYESLLGT +PF + IPLG
Sbjct: 140 ATYESLLGTNKPFPERIPLG 159


>Medtr3g107310.3 | DUF4050 family protein | HC |
           chr3:49505871-49502073 | 20130731
          Length = 143

 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/123 (65%), Positives = 95/123 (77%), Gaps = 2/123 (1%)

Query: 26  EASKGLITQGSAINNYDRSEDI-WSSSSFYMDHSAGYSQRSFSSITIPNHPSDPQSSAGN 84
           +ASKGL TQ   +NN +RS+D  WSSS+  +DH A  SQRS SSI++ NHPSDPQSS G 
Sbjct: 5   DASKGLKTQAQTMNNDNRSDDFFWSSSAIELDHGAIQSQRSISSISVSNHPSDPQSSDGI 64

Query: 85  QIDHPEEFVNHGLRLWKQTRKQWVGNKKTERRMQVGESRISWNATYESLLGTTRPFRQPI 144
           Q D PE FVNHGL LW QTR+QWVGNK++ R  QVGE ++SWNATYESLLGT +PF + I
Sbjct: 65  QTDSPE-FVNHGLLLWNQTRQQWVGNKRSGRPKQVGEPKLSWNATYESLLGTNKPFPERI 123

Query: 145 PLG 147
           PLG
Sbjct: 124 PLG 126


>Medtr4g010330.1 | DUF4050 family protein | HC |
           chr4:2343778-2338006 | 20130731
          Length = 274

 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/142 (50%), Positives = 97/142 (68%), Gaps = 6/142 (4%)

Query: 9   YGSRGCLGCFPKP--ISMDEASKGLITQGSAINNYDRSEDIWSSSSFYMDHSAGYSQRSF 66
           YGS GC+GC+ +P  ++++  S GL  QG A++    SED W++S+  MD+SA  SQ S 
Sbjct: 119 YGSSGCVGCYKRPALVTVEVPSTGLTKQGKAVDKPSTSEDFWTTSTHDMDNSAVQSQGSI 178

Query: 67  SSITIPNHPSDPQSSAGNQIDHPEEFVNHGLRLWKQTRKQWVGNKKTERR-MQVGESRIS 125
           SS ++ N      +S+ N   +P EFVNHGL LW QTR++WVGNKK E R  Q+ E ++S
Sbjct: 179 SSTSLTNQAVAAHASSSN---NPSEFVNHGLILWNQTRQRWVGNKKPENRTQQLREPKLS 235

Query: 126 WNATYESLLGTTRPFRQPIPLG 147
           WNATYESLL + +PFRQPIPL 
Sbjct: 236 WNATYESLLTSNKPFRQPIPLA 257


>Medtr4g010330.2 | DUF4050 family protein | HC |
           chr4:2343778-2338006 | 20130731
          Length = 288

 Score =  132 bits (331), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/156 (46%), Positives = 97/156 (62%), Gaps = 20/156 (12%)

Query: 9   YGSRGCLGCFPKP--ISMDEASKGLITQGSAINNYDRSEDIWSSSSFYMDHSAGYSQRSF 66
           YGS GC+GC+ +P  ++++  S GL  QG A++    SED W++S+  MD+SA  SQ S 
Sbjct: 119 YGSSGCVGCYKRPALVTVEVPSTGLTKQGKAVDKPSTSEDFWTTSTHDMDNSAVQSQGSI 178

Query: 67  SSITIPNHPSDPQSSAGNQIDHPEEFVNHGLRLWKQTRKQWVGNKKTERR-MQVGESRI- 124
           SS ++ N      +S+ N   +P EFVNHGL LW QTR++WVGNKK E R  Q+ E ++ 
Sbjct: 179 SSTSLTNQAVAAHASSSN---NPSEFVNHGLILWNQTRQRWVGNKKPENRTQQLREPKLR 235

Query: 125 -------------SWNATYESLLGTTRPFRQPIPLG 147
                        SWNATYESLL + +PFRQPIPL 
Sbjct: 236 TYFQCLAKFFWLCSWNATYESLLTSNKPFRQPIPLA 271


>Medtr3g107310.2 | DUF4050 family protein | HC |
           chr3:49505990-49502026 | 20130731
          Length = 132

 Score =  114 bits (286), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/96 (66%), Positives = 75/96 (78%), Gaps = 1/96 (1%)

Query: 52  SFYMDHSAGYSQRSFSSITIPNHPSDPQSSAGNQIDHPEEFVNHGLRLWKQTRKQWVGNK 111
           +  +DH A  SQRS SSI++ NHPSDPQSS G Q D PE FVNHGL LW QTR+QWVGNK
Sbjct: 21  AIELDHGAIQSQRSISSISVSNHPSDPQSSDGIQTDSPE-FVNHGLLLWNQTRQQWVGNK 79

Query: 112 KTERRMQVGESRISWNATYESLLGTTRPFRQPIPLG 147
           ++ R  QVGE ++SWNATYESLLGT +PF + IPLG
Sbjct: 80  RSGRPKQVGEPKLSWNATYESLLGTNKPFPERIPLG 115


>Medtr4g010330.3 | DUF4050 family protein | HC |
           chr4:2343778-2338941 | 20130731
          Length = 235

 Score =  104 bits (259), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/112 (47%), Positives = 73/112 (65%), Gaps = 5/112 (4%)

Query: 9   YGSRGCLGCFPKP--ISMDEASKGLITQGSAINNYDRSEDIWSSSSFYMDHSAGYSQRSF 66
           YGS GC+GC+ +P  ++++  S GL  QG A++    SED W++S+  MD+SA  SQ S 
Sbjct: 119 YGSSGCVGCYKRPALVTVEVPSTGLTKQGKAVDKPSTSEDFWTTSTHDMDNSAVQSQGSI 178

Query: 67  SSITIPNHPSDPQSSAGNQIDHPEEFVNHGLRLWKQTRKQWVGNKKTERRMQ 118
           SS ++ N      +S+ N   +P EFVNHGL LW QTR++WVGNKK E R Q
Sbjct: 179 SSTSLTNQAVAAHASSSN---NPSEFVNHGLILWNQTRQRWVGNKKPENRTQ 227


>Medtr4g114620.1 | DUF4050 family protein | HC |
           chr4:47144929-47148910 | 20130731
          Length = 172

 Score =  104 bits (259), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/138 (44%), Positives = 82/138 (59%), Gaps = 5/138 (3%)

Query: 13  GCLGCFPKP---ISMDEASKGLITQGSAINNYDRSEDIWSSSSFYMDHSAGYSQRSFSSI 69
           GC GC  KP   I++DE +KGL  QG  +     S+  WSSS   +D+S   SQRS SS+
Sbjct: 18  GCFGCCVKPTPIIAVDEPAKGLRIQGQTMRKPTTSDGFWSSSPCDLDNSTIQSQRSISSV 77

Query: 70  TIPNHPSDPQSSAGNQIDHPEEFVNHGLRLWKQTRKQWVGNKKTERR-MQVGESRISWNA 128
           +  N      + A      P EFVN GL LW ++R QWVG   +E++  Q  ESR++ NA
Sbjct: 78  STLNQILYQSNGASTPGTEP-EFVNQGLHLWNESRLQWVGRGLSEKQNQQKQESRLNRNA 136

Query: 129 TYESLLGTTRPFRQPIPL 146
           TYESLLGT +PF + +PL
Sbjct: 137 TYESLLGTRQPFPKSVPL 154


>Medtr1g012480.5 | DUF4050 family protein | HC |
           chr1:2486601-2488908 | 20130731
          Length = 211

 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/142 (47%), Positives = 81/142 (57%), Gaps = 3/142 (2%)

Query: 8   LYGSRGCLGCFPKP---ISMDEASKGLITQGSAINNYDRSEDIWSSSSFYMDHSAGYSQR 64
           ++ S GCL    KP   +SMDE  KG I QG  +   D S   WSSS+F  DHS   S+R
Sbjct: 52  IFSSIGCLRSREKPQATVSMDEGCKGEIIQGQTVTKDDGSSGFWSSSTFEKDHSEARSRR 111

Query: 65  SFSSITIPNHPSDPQSSAGNQIDHPEEFVNHGLRLWKQTRKQWVGNKKTERRMQVGESRI 124
           S SS  I    S    S+ +    P E VN GL  W Q R+QW GNK++ER+    E RI
Sbjct: 112 SVSSSGITMSISSDLQSSSSSQISPPESVNQGLVQWNQIRQQWAGNKRSERQTVAREPRI 171

Query: 125 SWNATYESLLGTTRPFRQPIPL 146
           S NATYE +LG  +PF QPIPL
Sbjct: 172 SSNATYEDILGNNKPFPQPIPL 193


>Medtr1g012480.4 | DUF4050 family protein | HC |
           chr1:2486596-2488669 | 20130731
          Length = 141

 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/123 (48%), Positives = 71/123 (57%)

Query: 24  MDEASKGLITQGSAINNYDRSEDIWSSSSFYMDHSAGYSQRSFSSITIPNHPSDPQSSAG 83
           MDE  KG I QG  +   D S   WSSS+F  DHS   S+RS SS  I    S    S+ 
Sbjct: 1   MDEGCKGEIIQGQTVTKDDGSSGFWSSSTFEKDHSEARSRRSVSSSGITMSISSDLQSSS 60

Query: 84  NQIDHPEEFVNHGLRLWKQTRKQWVGNKKTERRMQVGESRISWNATYESLLGTTRPFRQP 143
           +    P E VN GL  W Q R+QW GNK++ER+    E RIS NATYE +LG  +PF QP
Sbjct: 61  SSQISPPESVNQGLVQWNQIRQQWAGNKRSERQTVAREPRISSNATYEDILGNNKPFPQP 120

Query: 144 IPL 146
           IPL
Sbjct: 121 IPL 123


>Medtr1g012480.3 | DUF4050 family protein | HC |
           chr1:2486838-2488669 | 20130731
          Length = 141

 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/123 (48%), Positives = 71/123 (57%)

Query: 24  MDEASKGLITQGSAINNYDRSEDIWSSSSFYMDHSAGYSQRSFSSITIPNHPSDPQSSAG 83
           MDE  KG I QG  +   D S   WSSS+F  DHS   S+RS SS  I    S    S+ 
Sbjct: 1   MDEGCKGEIIQGQTVTKDDGSSGFWSSSTFEKDHSEARSRRSVSSSGITMSISSDLQSSS 60

Query: 84  NQIDHPEEFVNHGLRLWKQTRKQWVGNKKTERRMQVGESRISWNATYESLLGTTRPFRQP 143
           +    P E VN GL  W Q R+QW GNK++ER+    E RIS NATYE +LG  +PF QP
Sbjct: 61  SSQISPPESVNQGLVQWNQIRQQWAGNKRSERQTVAREPRISSNATYEDILGNNKPFPQP 120

Query: 144 IPL 146
           IPL
Sbjct: 121 IPL 123


>Medtr1g012480.8 | DUF4050 family protein | HC |
           chr1:2486601-2488908 | 20130731
          Length = 141

 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/123 (48%), Positives = 71/123 (57%)

Query: 24  MDEASKGLITQGSAINNYDRSEDIWSSSSFYMDHSAGYSQRSFSSITIPNHPSDPQSSAG 83
           MDE  KG I QG  +   D S   WSSS+F  DHS   S+RS SS  I    S    S+ 
Sbjct: 1   MDEGCKGEIIQGQTVTKDDGSSGFWSSSTFEKDHSEARSRRSVSSSGITMSISSDLQSSS 60

Query: 84  NQIDHPEEFVNHGLRLWKQTRKQWVGNKKTERRMQVGESRISWNATYESLLGTTRPFRQP 143
           +    P E VN GL  W Q R+QW GNK++ER+    E RIS NATYE +LG  +PF QP
Sbjct: 61  SSQISPPESVNQGLVQWNQIRQQWAGNKRSERQTVAREPRISSNATYEDILGNNKPFPQP 120

Query: 144 IPL 146
           IPL
Sbjct: 121 IPL 123


>Medtr1g012480.2 | DUF4050 family protein | HC |
           chr1:2486601-2488908 | 20130731
          Length = 141

 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/123 (48%), Positives = 71/123 (57%)

Query: 24  MDEASKGLITQGSAINNYDRSEDIWSSSSFYMDHSAGYSQRSFSSITIPNHPSDPQSSAG 83
           MDE  KG I QG  +   D S   WSSS+F  DHS   S+RS SS  I    S    S+ 
Sbjct: 1   MDEGCKGEIIQGQTVTKDDGSSGFWSSSTFEKDHSEARSRRSVSSSGITMSISSDLQSSS 60

Query: 84  NQIDHPEEFVNHGLRLWKQTRKQWVGNKKTERRMQVGESRISWNATYESLLGTTRPFRQP 143
           +    P E VN GL  W Q R+QW GNK++ER+    E RIS NATYE +LG  +PF QP
Sbjct: 61  SSQISPPESVNQGLVQWNQIRQQWAGNKRSERQTVAREPRISSNATYEDILGNNKPFPQP 120

Query: 144 IPL 146
           IPL
Sbjct: 121 IPL 123


>Medtr1g012480.1 | DUF4050 family protein | HC |
           chr1:2486581-2488908 | 20130731
          Length = 141

 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/123 (48%), Positives = 71/123 (57%)

Query: 24  MDEASKGLITQGSAINNYDRSEDIWSSSSFYMDHSAGYSQRSFSSITIPNHPSDPQSSAG 83
           MDE  KG I QG  +   D S   WSSS+F  DHS   S+RS SS  I    S    S+ 
Sbjct: 1   MDEGCKGEIIQGQTVTKDDGSSGFWSSSTFEKDHSEARSRRSVSSSGITMSISSDLQSSS 60

Query: 84  NQIDHPEEFVNHGLRLWKQTRKQWVGNKKTERRMQVGESRISWNATYESLLGTTRPFRQP 143
           +    P E VN GL  W Q R+QW GNK++ER+    E RIS NATYE +LG  +PF QP
Sbjct: 61  SSQISPPESVNQGLVQWNQIRQQWAGNKRSERQTVAREPRISSNATYEDILGNNKPFPQP 120

Query: 144 IPL 146
           IPL
Sbjct: 121 IPL 123


>Medtr4g114620.2 | DUF4050 family protein | HC |
           chr4:47144929-47148910 | 20130731
          Length = 199

 Score = 90.9 bits (224), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 82/165 (49%), Gaps = 32/165 (19%)

Query: 13  GCLGCFPKP---ISMDEASKGLITQGSAINNYDRSEDIWSSSSFYMDHSAGYSQRSFSSI 69
           GC GC  KP   I++DE +KGL  QG  +     S+  WSSS   +D+S   SQRS SS+
Sbjct: 18  GCFGCCVKPTPIIAVDEPAKGLRIQGQTMRKPTTSDGFWSSSPCDLDNSTIQSQRSISSV 77

Query: 70  TIPNHPSDPQSSAGNQIDHPEEFVNHGLRLWKQTRKQWVGNKKTERR-MQVGESRI---- 124
           +  N      + A      P EFVN GL LW ++R QWVG   +E++  Q  ESR+    
Sbjct: 78  STLNQILYQSNGASTPGTEP-EFVNQGLHLWNESRLQWVGRGLSEKQNQQKQESRLNSSR 136

Query: 125 -----------------------SWNATYESLLGTTRPFRQPIPL 146
                                  S NATYESLLGT +PF + +PL
Sbjct: 137 PFVLSCLSEFLPCEWLINHCVCCSRNATYESLLGTRQPFPKSVPL 181


>Medtr1g012480.6 | DUF4050 family protein | HC |
           chr1:2486601-2488908 | 20130731
          Length = 102

 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 54/101 (53%)

Query: 24  MDEASKGLITQGSAINNYDRSEDIWSSSSFYMDHSAGYSQRSFSSITIPNHPSDPQSSAG 83
           MDE  KG I QG  +   D S   WSSS+F  DHS   S+RS SS  I    S    S+ 
Sbjct: 1   MDEGCKGEIIQGQTVTKDDGSSGFWSSSTFEKDHSEARSRRSVSSSGITMSISSDLQSSS 60

Query: 84  NQIDHPEEFVNHGLRLWKQTRKQWVGNKKTERRMQVGESRI 124
           +    P E VN GL  W Q R+QW GNK++ER+    E RI
Sbjct: 61  SSQISPPESVNQGLVQWNQIRQQWAGNKRSERQTVAREPRI 101


>Medtr1g012480.7 | DUF4050 family protein | HC |
           chr1:2486601-2488908 | 20130731
          Length = 102

 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 54/101 (53%)

Query: 24  MDEASKGLITQGSAINNYDRSEDIWSSSSFYMDHSAGYSQRSFSSITIPNHPSDPQSSAG 83
           MDE  KG I QG  +   D S   WSSS+F  DHS   S+RS SS  I    S    S+ 
Sbjct: 1   MDEGCKGEIIQGQTVTKDDGSSGFWSSSTFEKDHSEARSRRSVSSSGITMSISSDLQSSS 60

Query: 84  NQIDHPEEFVNHGLRLWKQTRKQWVGNKKTERRMQVGESRI 124
           +    P E VN GL  W Q R+QW GNK++ER+    E RI
Sbjct: 61  SSQISPPESVNQGLVQWNQIRQQWAGNKRSERQTVAREPRI 101


>Medtr1g094145.2 | DUF4050 family protein | HC |
           chr1:42325452-42327850 | 20130731
          Length = 123

 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 31/55 (56%)

Query: 92  FVNHGLRLWKQTRKQWVGNKKTERRMQVGESRISWNATYESLLGTTRPFRQPIPL 146
           FVNH    W + RK+WVG+K         +  ISW+ +YE LL T  PF + IPL
Sbjct: 50  FVNHAANAWHENRKKWVGDKAMHSPRTPKDPIISWSTSYEDLLSTHEPFAERIPL 104


>Medtr1g094145.1 | DUF4050 family protein | HC |
           chr1:42324612-42328023 | 20130731
          Length = 123

 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 31/55 (56%)

Query: 92  FVNHGLRLWKQTRKQWVGNKKTERRMQVGESRISWNATYESLLGTTRPFRQPIPL 146
           FVNH    W + RK+WVG+K         +  ISW+ +YE LL T  PF + IPL
Sbjct: 50  FVNHAANAWHENRKKWVGDKAMHSPRTPKDPIISWSTSYEDLLSTHEPFAERIPL 104