Miyakogusa Predicted Gene

Lj1g3v1857400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1857400.1 Non Characterized Hit- tr|A3BKR7|A3BKR7_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,43.06,0.0000008,seg,NULL; no description,Armadillo-like
helical,CUFF.28086.1
         (179 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g106630.1 | hypothetical protein | HC | chr3:49281423-4927...   198   3e-51
Medtr4g115690.1 | hypothetical protein | HC | chr4:47810138-4781...   134   6e-32
Medtr4g014150.1 | hypothetical protein | HC | chr4:3928903-39278...    54   7e-08

>Medtr3g106630.1 | hypothetical protein | HC |
           chr3:49281423-49279247 | 20130731
          Length = 383

 Score =  198 bits (503), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 110/181 (60%), Positives = 126/181 (69%), Gaps = 7/181 (3%)

Query: 1   MGPTIKALIAMASTCSVQVLTSLVRFIRSPLVDEILSHGEIPTIVGFLRLQDLSLCAAAL 60
           MGPTIKALIAM+S CS++V++ LVR IRSPLVDEILS+G IP I+GFL   D  L  AAL
Sbjct: 208 MGPTIKALIAMSSECSIKVISLLVRLIRSPLVDEILSNGMIPKIIGFLLSSDWCLRVAAL 267

Query: 61  DCVMEIAYIGRMEVVEAMFQENLVKILMELQRKGSESGDSSYDVEENRGREKYEGVEE-- 118
           DCV E+ YIGR EVVEAM Q+ LVKILM LQRK     +   DVEE R +EK  GV+   
Sbjct: 268 DCVFELCYIGRREVVEAMLQQELVKILMILQRK-----EDLCDVEEIREKEKVLGVDYDL 322

Query: 119 FDAVFAGCVSRFAIQLEVGEGXXXXXXXXXXXXXXXXXXXASQSDAECATVSAEILWGST 178
            D+VF GCVSRFAIQ+E+GEG                   ASQSDAE ATVSAEILWGS+
Sbjct: 323 DDSVFDGCVSRFAIQVEIGEGLSSEEKREVKLEILRLVKEASQSDAEFATVSAEILWGSS 382

Query: 179 P 179
           P
Sbjct: 383 P 383


>Medtr4g115690.1 | hypothetical protein | HC |
           chr4:47810138-47811531 | 20130731
          Length = 360

 Score =  134 bits (336), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 99/179 (55%), Gaps = 26/179 (14%)

Query: 1   MGPTIKALIAMASTCSVQVLTSLVRFIRSPLVDEILSHGEIPTIVGFLRLQDLSLCAAAL 60
           M PT++ALI + S  S++VL SL+R IRSP+VDEI S+GEI  I+  L   ++ L   A+
Sbjct: 208 MNPTVEALIDIGSVRSIEVLCSLIRLIRSPIVDEIESNGEITKIIALLNSDNMKLSLLAM 267

Query: 61  DCVMEIAYIGRMEVVEAMFQENLVKILMELQRKGSESGDSSYDVEENRGREKYEGVEEFD 120
           +CV+EI Y GR E VE M +E +V+  +ELQR  SE                        
Sbjct: 268 ECVLEIGYFGRKEAVEGMLKEGVVEKFVELQRLESE------------------------ 303

Query: 121 AVFAGCVSRFAIQLEVGEGXXXXXXXXXXXXXXXXXXXASQSDAECATVSAEILWGSTP 179
             FA CV+RFA+QLEVGEG                   A  SDAE AT+ AE+LWG++P
Sbjct: 304 --FASCVARFAVQLEVGEGLRQREKRSFKGEILVRVREACVSDAEAATIVAEVLWGTSP 360


>Medtr4g014150.1 | hypothetical protein | HC | chr4:3928903-3927849
           | 20130731
          Length = 254

 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 17/83 (20%)

Query: 1   MGPTIKALIAMASTCSVQVLTSLVRFIRSPLVDEILSHGEIPTIVGFLRLQDLSLCAAAL 60
           M PT++ALI + S                 ++DEI S+GEI  ++  L   ++ L   A+
Sbjct: 182 MNPTVEALIDIGS-----------------VLDEIESNGEITKVIALLNSYNMKLSLLAM 224

Query: 61  DCVMEIAYIGRMEVVEAMFQENL 83
           +CV+EI Y GR E VE M +  L
Sbjct: 225 ECVLEIGYFGRKEAVEGMLKHKL 247