Miyakogusa Predicted Gene
- Lj1g3v1819810.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1819810.2 Non Characterized Hit- tr|C5Y5X2|C5Y5X2_SORBI
Putative uncharacterized protein Sb05g023880
OS=Sorghu,45.76,3e-18,seg,NULL; Tudor/PWWP/MBT,NULL; Tudor
domain,Tudor domain; ANDROGEN INDUCED INHIBITOR OF
PROLIFERATIO,CUFF.29087.2
(510 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g106100.1 | nucleic acid-binding protein, putative | HC | ... 215 1e-55
Medtr1g014270.1 | lamin-B receptor of tudor domain protein | HC ... 201 2e-51
Medtr2g027090.1 | sister chromatid cohesion PDS5-like protein | ... 86 1e-16
Medtr4g134080.3 | sister chromatid cohesion PDS5-like protein | ... 82 1e-15
Medtr4g134080.1 | sister chromatid cohesion PDS5-like protein | ... 82 2e-15
Medtr4g134080.2 | sister chromatid cohesion PDS5-like protein | ... 82 2e-15
Medtr4g006875.2 | sister chromatid cohesion PDS5-like protein | ... 80 6e-15
Medtr4g006875.1 | sister chromatid cohesion PDS5-like protein | ... 80 6e-15
Medtr1g010290.1 | enhancer of polycomb-like transcription factor... 62 2e-09
Medtr7g109470.1 | DNA mismatch repair MSH3-like protein | HC | c... 58 2e-08
Medtr7g021365.1 | histone-lysine N-methyltransferase ATX2-like p... 58 2e-08
Medtr7g021365.2 | histone-lysine N-methyltransferase ATX2-like p... 58 2e-08
Medtr7g021365.3 | histone-lysine N-methyltransferase ATX2-like p... 58 2e-08
>Medtr3g106100.1 | nucleic acid-binding protein, putative | HC |
chr3:48971316-48964581 | 20130731
Length = 802
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/255 (49%), Positives = 159/255 (62%), Gaps = 37/255 (14%)
Query: 2 KEDPAKEGAAEDVSNKMSKGASDSEAKPARRSVKKALGRNSDVKDTTVADLVKKGSGAAS 61
K+ P+ AE VS K S+GAS S+AKP ++ V+K LG+NS VK T D KK SG+AS
Sbjct: 390 KDSPSNVEVAEAVSKKASEGASISKAKPVKQPVRKVLGQNSGVKKTAGTDSGKKQSGSAS 449
Query: 62 DVDAKKNSAKKLGEHKSDINAKKHSAKKLDEQKGGSGSSSRKLENNKKSGRGKANSEAAV 121
DAKK HS KKLD+ +GG GSSSR+L + KK G+
Sbjct: 450 GADAKK-----------------HSVKKLDDNEGGGGSSSRQLVDKKKRGQ--------- 483
Query: 122 AKSSAIDVDKEMTVYSPRSGTKSTKSENTEEIPLTSAKRKRTPGKEKESDTKKYGENLVG 181
E V SPRS KS++ E EE +T+ KRK G++ ESD ++ +NLVG
Sbjct: 484 ----------EEMVSSPRSDIKSSEDEKLEETTMTNGKRKHASGRKNESDIMEHDQNLVG 533
Query: 182 LRVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVIKKADSDADGE 241
+R++VWWP+DR+FY GV+ SFDS +KKHKV+YDDG+ E LNL EKW VI +ADSDAD E
Sbjct: 534 VRLEVWWPKDRQFYKGVIESFDSRKKKHKVVYDDGEVEVLNLAREKWNVI-EADSDADEE 592
Query: 242 EGSDQAGLDGSAEMP 256
EGSD+ LD S EMP
Sbjct: 593 EGSDRGSLDASIEMP 607
>Medtr1g014270.1 | lamin-B receptor of tudor domain protein | HC |
chr1:3029508-3039200 | 20130731
Length = 930
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/252 (51%), Positives = 158/252 (62%), Gaps = 44/252 (17%)
Query: 6 AKEGAAEDVSNKMSKGASDSEAKPARRSVKKALGRNSDVKDTTVADLVKKGSGAASDVDA 65
AKE AAED+S K+S+G SDS+ KPAR S KK R+SDVK TV V +DV
Sbjct: 517 AKEVAAEDISKKVSEGTSDSKVKPARPSAKKGPIRSSDVK--TVVHAV------MADV-- 566
Query: 66 KKNSAKKLGEHKSDINAKKHSAKKLDEQKGGSGSSSRKLENNKKSGRGKANSEAAVAKSS 125
GSSS K E+ KK K +SE +AKSS
Sbjct: 567 --------------------------------GSSSLKPEDKKKKTHVKGSSEKGLAKSS 594
Query: 126 AIDVDKEMTVYSPRSGTKSTKSENTEEIPLTSAKRKRTPGKEKESDTKKYGENLVGLRVK 185
A D DK +TV S +S TK+TK E++EE P T+ KRKRTPGKEK SDTKK ++LVG RVK
Sbjct: 595 AEDEDK-VTVSSLKSATKTTKDEHSEETPKTTLKRKRTPGKEKGSDTKKNDQSLVGKRVK 653
Query: 186 VWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVIK-KADSDADGEEGS 244
VWWP+D FY GVV+SFDS+ KKHKVLYDDGDEE LN +EEK+ +++ AD+D D EEGS
Sbjct: 654 VWWPDDNMFYKGVVDSFDSSTKKHKVLYDDGDEEILNFKEEKYEIVEVDADADPDVEEGS 713
Query: 245 DQAGLDGSAEMP 256
+A + SA+MP
Sbjct: 714 HRASPEPSADMP 725
>Medtr2g027090.1 | sister chromatid cohesion PDS5-like protein | HC |
chr2:9853017-9871224 | 20130731
Length = 1683
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%), Gaps = 4/66 (6%)
Query: 166 KEKESDTKKYGENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLRE 225
KE ESD E+L+G RVKVWWP D++FY G V S+DS+++KH +LYDDG+ E L L +
Sbjct: 1358 KEGESD----AEDLIGCRVKVWWPLDKKFYKGTVQSYDSSKRKHAILYDDGEVEKLCLEK 1413
Query: 226 EKWGVI 231
E+W +I
Sbjct: 1414 ERWELI 1419
>Medtr4g134080.3 | sister chromatid cohesion PDS5-like protein | HC |
chr4:56119254-56132113 | 20130731
Length = 1667
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 10/81 (12%)
Query: 159 KRKRTPGKEK------ESDTKKYGENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVL 212
KRKR G K E D+ E+L+G R+K+WWP D+++Y G + S+DS ++KH +L
Sbjct: 1361 KRKRVAGLTKCAMKRGEIDS----EDLIGCRIKIWWPTDKKYYGGTIKSYDSLKRKHVIL 1416
Query: 213 YDDGDEETLNLREEKWGVIKK 233
Y+DGD E L L +E+W ++ K
Sbjct: 1417 YEDGDVEILRLEKERWELLDK 1437
>Medtr4g134080.1 | sister chromatid cohesion PDS5-like protein | HC |
chr4:56119240-56132121 | 20130731
Length = 1660
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 10/81 (12%)
Query: 159 KRKRTPGKEK------ESDTKKYGENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVL 212
KRKR G K E D+ E+L+G R+K+WWP D+++Y G + S+DS ++KH +L
Sbjct: 1353 KRKRVAGLTKCAMKRGEIDS----EDLIGCRIKIWWPTDKKYYGGTIKSYDSLKRKHVIL 1408
Query: 213 YDDGDEETLNLREEKWGVIKK 233
Y+DGD E L L +E+W ++ K
Sbjct: 1409 YEDGDVEILRLEKERWELLDK 1429
>Medtr4g134080.2 | sister chromatid cohesion PDS5-like protein | HC |
chr4:56119398-56132067 | 20130731
Length = 1657
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 10/81 (12%)
Query: 159 KRKRTPGKEK------ESDTKKYGENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVL 212
KRKR G K E D+ E+L+G R+K+WWP D+++Y G + S+DS ++KH +L
Sbjct: 1353 KRKRVAGLTKCAMKRGEIDS----EDLIGCRIKIWWPTDKKYYGGTIKSYDSLKRKHVIL 1408
Query: 213 YDDGDEETLNLREEKWGVIKK 233
Y+DGD E L L +E+W ++ K
Sbjct: 1409 YEDGDVEILRLEKERWELLDK 1429
>Medtr4g006875.2 | sister chromatid cohesion PDS5-like protein | HC
| chr4:842674-848397 | 20130731
Length = 799
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%)
Query: 168 KESDTKKYGENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREEK 227
K +++ G +LVG R+KVWWP D+ +Y G V+++D KHKVLYDDG EE +NL++ +
Sbjct: 715 KAQESEDLGNSLVGKRIKVWWPLDKTYYEGAVSAYDHVNGKHKVLYDDGVEEQINLKKHR 774
Query: 228 W 228
W
Sbjct: 775 W 775
>Medtr4g006875.1 | sister chromatid cohesion PDS5-like protein | HC
| chr4:842728-848441 | 20130731
Length = 761
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%)
Query: 168 KESDTKKYGENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREEK 227
K +++ G +LVG R+KVWWP D+ +Y G V+++D KHKVLYDDG EE +NL++ +
Sbjct: 677 KAQESEDLGNSLVGKRIKVWWPLDKTYYEGAVSAYDHVNGKHKVLYDDGVEEQINLKKHR 736
Query: 228 W 228
W
Sbjct: 737 W 737
>Medtr1g010290.1 | enhancer of polycomb-like transcription factor
protein | HC | chr1:1894865-1888016 | 20130731
Length = 1660
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 37/49 (75%)
Query: 183 RVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVI 231
R+KV+WP D+ +Y G+VN +D A++ H + YDD DEE +NL+ E++ ++
Sbjct: 359 RIKVFWPLDQSWYYGLVNDYDEAQRLHHIKYDDRDEEWINLQTERFKLL 407
>Medtr7g109470.1 | DNA mismatch repair MSH3-like protein | HC |
chr7:44767037-44759016 | 20130731
Length = 1280
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 179 LVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVIKKADS 236
+G R++V+WP D +Y G V SFD+ KH++ YDD +EE+++L +EK I+ + S
Sbjct: 90 FIGKRIRVYWPLDEAWYEGTVKSFDTVTSKHRIRYDDDEEESIDLSKEKIEWIQDSSS 147
>Medtr7g021365.1 | histone-lysine N-methyltransferase ATX2-like
protein | HC | chr7:6764175-6749832 | 20130731
Length = 1069
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 177 ENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREE 226
E VGL+ KV+WP D + YTG+V S+D K H + YDDG+EE L L E
Sbjct: 198 EAFVGLKCKVYWPMDLKSYTGLVKSYDREAKIHHIEYDDGEEENLILSNE 247
>Medtr7g021365.2 | histone-lysine N-methyltransferase ATX2-like
protein | HC | chr7:6764175-6749832 | 20130731
Length = 1069
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 177 ENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREE 226
E VGL+ KV+WP D + YTG+V S+D K H + YDDG+EE L L E
Sbjct: 198 EAFVGLKCKVYWPMDLKSYTGLVKSYDREAKIHHIEYDDGEEENLILSNE 247
>Medtr7g021365.3 | histone-lysine N-methyltransferase ATX2-like
protein | HC | chr7:6764175-6755447 | 20130731
Length = 864
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 177 ENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREE 226
E VGL+ KV+WP D + YTG+V S+D K H + YDDG+EE L L E
Sbjct: 198 EAFVGLKCKVYWPMDLKSYTGLVKSYDREAKIHHIEYDDGEEENLILSNE 247