Miyakogusa Predicted Gene

Lj1g3v1814310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1814310.1 Non Characterized Hit- tr|I1JU62|I1JU62_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,97.26,0,seg,NULL;
TRANSMEMBRANE 9 SUPERFAMILY PROTEIN,Nonaspanin (TM9SF);
EMP70,Nonaspanin (TM9SF),CUFF.28033.1
         (146 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g105950.1 | endomembrane protein 70 family protein | HC | ...   228   1e-60
Medtr1g014080.1 | endomembrane protein 70 family protein | HC | ...   224   3e-59
Medtr8g016270.1 | endomembrane protein 70 family protein | HC | ...   214   3e-56
Medtr5g098730.1 | transmembrane 9 family protein | HC | chr5:432...   118   2e-27
Medtr3g082140.1 | transmembrane 9 family protein | HC | chr3:370...   115   1e-26
Medtr0204s0010.1 | endomembrane protein 70 family protein | HC |...   115   2e-26
Medtr6g074910.1 | transmembrane 9 family protein | HC | chr6:277...   101   2e-22
Medtr5g077170.1 | transmembrane 9 family protein | HC | chr5:329...    96   1e-20
Medtr8g088730.1 | endomembrane protein 70 family protein | HC | ...    89   2e-18
Medtr2g006300.1 | endomembrane protein 70 family protein | HC | ...    79   2e-15
Medtr4g053270.1 | endomembrane protein 70 family protein | HC | ...    74   5e-14
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3...    49   1e-06

>Medtr3g105950.1 | endomembrane protein 70 family protein | HC |
           chr3:48860597-48856652 | 20130731
          Length = 636

 Score =  228 bits (582), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 118/146 (80%), Positives = 118/146 (80%)

Query: 1   MNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGXXXXXXXXXXXTCAEITIVLC 60
           MNP FSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFG           TCAEITIVLC
Sbjct: 491 MNPAFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILVVTCAEITIVLC 550

Query: 61  YFQLCSEDYSWWWRSYLTSGSSXXXXXXXXXXXXXXKLEITKLVSAIFYFGYMLIASYAF 120
           YFQLCSEDY WWWRSYLTSGSS              KLEITKLVSAIFYFGYMLIASYAF
Sbjct: 551 YFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAIFYFGYMLIASYAF 610

Query: 121 FVVTGTIGFYACLWFTRLIYSSVKID 146
           FVVTGTIGFYAC WFTRLIYSSVKID
Sbjct: 611 FVVTGTIGFYACFWFTRLIYSSVKID 636


>Medtr1g014080.1 | endomembrane protein 70 family protein | HC |
           chr1:3132558-3127477 | 20130731
          Length = 637

 Score =  224 bits (570), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 115/146 (78%), Positives = 116/146 (79%)

Query: 1   MNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGXXXXXXXXXXXTCAEITIVLC 60
           MNP FSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFG           TCAEIT+VLC
Sbjct: 492 MNPAFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFVILVITCAEITVVLC 551

Query: 61  YFQLCSEDYSWWWRSYLTSGSSXXXXXXXXXXXXXXKLEITKLVSAIFYFGYMLIASYAF 120
           YFQLCSEDY WWWRSYLTSGSS              KLEITKLVSAI YFGYM IASYAF
Sbjct: 552 YFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAILYFGYMFIASYAF 611

Query: 121 FVVTGTIGFYACLWFTRLIYSSVKID 146
           FVVTGTIGFYAC WFTRLIYSSVKID
Sbjct: 612 FVVTGTIGFYACFWFTRLIYSSVKID 637


>Medtr8g016270.1 | endomembrane protein 70 family protein | HC |
           chr8:5472860-5468332 | 20130731
          Length = 648

 Score =  214 bits (544), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 108/146 (73%), Positives = 114/146 (78%)

Query: 1   MNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGXXXXXXXXXXXTCAEITIVLC 60
           M PVFS+LIGGILPFGAVFIELFFILTSIWLNQFYYIFG           TCAEIT+VLC
Sbjct: 503 MTPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFIILLITCAEITVVLC 562

Query: 61  YFQLCSEDYSWWWRSYLTSGSSXXXXXXXXXXXXXXKLEITKLVSAIFYFGYMLIASYAF 120
           YFQLCSEDY+WWWR+YLT+GSS              KLEITKLVS I YFGYM+I SYAF
Sbjct: 563 YFQLCSEDYNWWWRAYLTAGSSAVYLFLYSIFYFFTKLEITKLVSGILYFGYMIIVSYAF 622

Query: 121 FVVTGTIGFYACLWFTRLIYSSVKID 146
           FVVTGTIGFYAC WF R IYSSVKID
Sbjct: 623 FVVTGTIGFYACFWFVRKIYSSVKID 648


>Medtr5g098730.1 | transmembrane 9 family protein | HC |
           chr5:43220823-43218097 | 20130731
          Length = 665

 Score =  118 bits (295), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/141 (44%), Positives = 83/141 (58%), Gaps = 1/141 (0%)

Query: 7   VLIGGILPFGAVFIELFFILTSIWLNQFYYIFGXXXXXXXXXXXTCAEITIVLCYFQLCS 66
           VL  G LPFG +FIELFFIL+SIWL +FYY+FG            CAE+++VL Y  LC 
Sbjct: 525 VLGAGTLPFGTLFIELFFILSSIWLGRFYYVFGFLLVVLLLLTIVCAEVSVVLTYMHLCV 584

Query: 67  EDYSWWWRSYLTSGSSXXXXXXXXXXXXXXKLE-ITKLVSAIFYFGYMLIASYAFFVVTG 125
           ED+ WWW+++  SGS                L+ ++  VSAI Y GY L+ + A  + TG
Sbjct: 585 EDWRWWWKAFYASGSVALYVFLYSINYLVFDLQSLSGPVSAILYIGYSLLMAIAIMLSTG 644

Query: 126 TIGFYACLWFTRLIYSSVKID 146
           TIGF    +F   ++SSVKID
Sbjct: 645 TIGFLVSFYFVHYLFSSVKID 665


>Medtr3g082140.1 | transmembrane 9 family protein | HC |
           chr3:37068525-37072769 | 20130731
          Length = 659

 Score =  115 bits (289), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/141 (43%), Positives = 82/141 (58%), Gaps = 1/141 (0%)

Query: 7   VLIGGILPFGAVFIELFFILTSIWLNQFYYIFGXXXXXXXXXXXTCAEITIVLCYFQLCS 66
           VL  G LPFG +FIELFFIL+SIWL +FYY+FG            CAE+++VL Y  LC 
Sbjct: 519 VLGAGTLPFGTLFIELFFILSSIWLGRFYYVFGFLLVVLLLLIVVCAEVSVVLTYMHLCV 578

Query: 67  EDYSWWWRSYLTSGSSXXXXXXXXXXXXXXKLE-ITKLVSAIFYFGYMLIASYAFFVVTG 125
           ED+ WWW+++  SGS                L+ ++  VSA  Y GY L+ + A  + TG
Sbjct: 579 EDWRWWWKAFYASGSVALYVFLYSINYLVFDLQSLSGPVSATLYLGYSLLMAIAIMLSTG 638

Query: 126 TIGFYACLWFTRLIYSSVKID 146
           TIGF    +F   ++SSVKID
Sbjct: 639 TIGFLMSFYFVHYLFSSVKID 659


>Medtr0204s0010.1 | endomembrane protein 70 family protein | HC |
           scaffold0204:1-1695 | 20130731
          Length = 448

 Score =  115 bits (287), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/141 (42%), Positives = 81/141 (57%), Gaps = 1/141 (0%)

Query: 7   VLIGGILPFGAVFIELFFILTSIWLNQFYYIFGXXXXXXXXXXXTCAEITIVLCYFQLCS 66
           VL  G LPFG +FIELFFI++SIW+ + YY+FG            CAE+++VL Y  LC 
Sbjct: 308 VLGAGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLFIVLILLVVVCAEVSLVLTYMHLCV 367

Query: 67  EDYSWWWRSYLTSGSSXXXXXXXXXXXXXXKLE-ITKLVSAIFYFGYMLIASYAFFVVTG 125
           ED+ WWW+S+  SGS                L+ ++  VSA  Y GY L    A  +VTG
Sbjct: 368 EDWRWWWKSFFASGSVALYIFLYSINYLVFDLKNLSGPVSATLYLGYSLFMVLAIMLVTG 427

Query: 126 TIGFYACLWFTRLIYSSVKID 146
           T+GF +  WF   ++SSVK+D
Sbjct: 428 TVGFLSSFWFVYYLFSSVKLD 448


>Medtr6g074910.1 | transmembrane 9 family protein | HC |
           chr6:27756661-27761522 | 20130731
          Length = 588

 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 78/141 (55%)

Query: 6   SVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGXXXXXXXXXXXTCAEITIVLCYFQLC 65
            + + G LPF A++IEL++I  S+W ++ Y I+              A IT+ L YFQL 
Sbjct: 448 QMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYSILFIVFIILLIVTAFITVALTYFQLA 507

Query: 66  SEDYSWWWRSYLTSGSSXXXXXXXXXXXXXXKLEITKLVSAIFYFGYMLIASYAFFVVTG 125
           +ED+ WWWRS+L  GS+              + +++  +   F+FGYM    + FF++ G
Sbjct: 508 AEDHEWWWRSFLCGGSTGLFIYAYCLYYYYARSDMSGFMQTSFFFGYMACICFGFFLMLG 567

Query: 126 TIGFYACLWFTRLIYSSVKID 146
           T+GF A L+F R IY S+K +
Sbjct: 568 TVGFRAALFFVRHIYRSIKCE 588


>Medtr5g077170.1 | transmembrane 9 family protein | HC |
           chr5:32931670-32935743 | 20130731
          Length = 591

 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 74/141 (52%)

Query: 6   SVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGXXXXXXXXXXXTCAEITIVLCYFQLC 65
            + + G LPF A+FIEL++I  S+W +Q Y I+              A   + L YFQL 
Sbjct: 451 QMAMAGFLPFSAIFIELYYIFASVWGHQIYTIYSILFIVFIILLIVTAFGNVALTYFQLA 510

Query: 66  SEDYSWWWRSYLTSGSSXXXXXXXXXXXXXXKLEITKLVSAIFYFGYMLIASYAFFVVTG 125
           +ED+ WWWRS+L  GS+              + +++  +   F+FGYM    Y FF++ G
Sbjct: 511 AEDHEWWWRSFLCGGSTGLFIYGYCMFFYHARSDMSGFMQTSFFFGYMACICYGFFLMLG 570

Query: 126 TIGFYACLWFTRLIYSSVKID 146
           T+ F A L F R IY S+K +
Sbjct: 571 TVSFRASLIFVRHIYRSLKCE 591


>Medtr8g088730.1 | endomembrane protein 70 family protein | HC |
           chr8:36859213-36852563 | 20130731
          Length = 589

 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%)

Query: 1   MNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGXXXXXXXXXXXTCAEITIVLC 60
           + P    L+GG+LPFG++FIE++F+ TS W  + YY++G               +TIV  
Sbjct: 444 LTPSVVSLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILTIVTVCVTIVGT 503

Query: 61  YFQLCSEDYSWWWRSYLTSGSSXXXXXXXXXXXXXXKLEITKLVSAIFYFGYMLIASYAF 120
           YF L +E+Y W W S+ ++ S+              K +++      FYFGY L+ S   
Sbjct: 504 YFLLNAENYHWQWTSFFSAASTSVYVYLYSIYYYYVKTKMSGFFQTSFYFGYTLMFSLGL 563

Query: 121 FVVTGTIGFYACLWFTRLIYSSVKID 146
            ++ G +GF     F R IY ++K D
Sbjct: 564 GILCGAVGFLGSNLFVRRIYRNIKCD 589


>Medtr2g006300.1 | endomembrane protein 70 family protein | HC |
           chr2:533436-526703 | 20130731
          Length = 583

 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 73/146 (50%)

Query: 1   MNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGXXXXXXXXXXXTCAEITIVLC 60
           + P    L+GG+LPFG++FIE++F+ TS W  + YY++G               +TIV  
Sbjct: 438 LTPSVVSLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILIVVTVCVTIVGT 497

Query: 61  YFQLCSEDYSWWWRSYLTSGSSXXXXXXXXXXXXXXKLEITKLVSAIFYFGYMLIASYAF 120
           YF L +E+Y+W W S+L++ S+              K +++      FYFGY  +     
Sbjct: 498 YFLLNAENYNWQWTSFLSAASTGVYVYLYSIYYYYVKTKMSGFFQTSFYFGYTAMFCLGL 557

Query: 121 FVVTGTIGFYACLWFTRLIYSSVKID 146
            ++ G +G      F R IY ++K D
Sbjct: 558 GILCGAVGHLGSNLFVRRIYRNIKCD 583


>Medtr4g053270.1 | endomembrane protein 70 family protein | HC |
           chr4:19263516-19258028 | 20130731
          Length = 589

 Score = 73.9 bits (180), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 66/142 (46%), Gaps = 1/142 (0%)

Query: 5   FSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGXXXXXXXXXXXTCAEITIVLCYFQL 64
           F + IGG +PF A+ ++L  +  S+W  + Y + G             A + I L Y QL
Sbjct: 449 FQMFIGGFVPFSAIVLQLHQVYASLWGYKIYTLPGILAATLITVIVIIALVNISLTYVQL 508

Query: 65  CSEDYSWWWRSYLTSGSSXXXXXXXXXXXXXXKLEITKLVSAIFYFGYMLIASYAFFVVT 124
             ED+ WWWRS L  GS+              +  ++  +   F+ GY     YAFF++ 
Sbjct: 509 SVEDHEWWWRSVLCGGST-AIFMFGYGIYFYARSRMSGFLQLSFFIGYNACICYAFFLIF 567

Query: 125 GTIGFYACLWFTRLIYSSVKID 146
           G I F   L F R IY +VK +
Sbjct: 568 GAISFRVSLLFVRHIYHNVKRE 589


>Medtr3g105900.1 | proton gradient regulation protein | HC |
            chr3:48847086-48840643 | 20130731
          Length = 1246

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/25 (88%), Positives = 22/25 (88%)

Query: 14   PFGAVFIELFFILTSIWLNQFYYIF 38
            PFGAVFI LFFI TSI LNQFYYIF
Sbjct: 1130 PFGAVFIGLFFIFTSIRLNQFYYIF 1154