Miyakogusa Predicted Gene

Lj1g3v1812240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1812240.1 tr|C1DZE8|C1DZE8_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_56563
,33.9,0.0000000003,Sas10_Utp3,Sas10/Utp3/C1D; SUN-COR STEROID HORMONE
RECEPTOR CO-REPRESSOR,Exosome-associated factor R,CUFF.28001.1
         (213 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g105925.3 | Sas10/Utp3/C1D family protein | HC | chr3:4885...   311   4e-85
Medtr3g105925.2 | Sas10/Utp3/C1D family protein | HC | chr3:4885...   311   4e-85
Medtr3g105925.4 | Sas10/Utp3/C1D family protein | HC | chr3:4885...   311   4e-85
Medtr3g105925.1 | Sas10/Utp3/C1D family protein | HC | chr3:4885...   311   4e-85
Medtr1g014130.1 | Sas10/Utp3/C1D family protein | HC | chr1:3109...   112   3e-25

>Medtr3g105925.3 | Sas10/Utp3/C1D family protein | HC |
           chr3:48850057-48852759 | 20130731
          Length = 228

 Score =  311 bits (796), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 156/213 (73%), Positives = 179/213 (84%), Gaps = 5/213 (2%)

Query: 1   MVKAS-AES--AVPESVTDSVTTTLSNLQELRTHFHQFLSLTDPETLSQLPPLQRAQSLF 57
           MVK S +ES   VPE+V DSV TTLSNL+E R+HF QFL L +P+ LSQLPPL+RA SLF
Sbjct: 1   MVKGSESESCGGVPEAVMDSVNTTLSNLREFRSHFQQFLPLMNPQILSQLPPLERAHSLF 60

Query: 58  LLSKITSTLLALNLRCSGINPDDHPVKSELDRVNLYEDKLDRLLDLSKAPLRPSTTLNYQ 117
           LLSKITSTLL L LRCSG+ PDD+PVKSELDRV LY+DKL+RLLDL+KAPLRPST LN Q
Sbjct: 61  LLSKITSTLLTLKLRCSGVQPDDNPVKSELDRVELYQDKLERLLDLNKAPLRPSTMLNSQ 120

Query: 118 AATRFIEHSLPDLTSEQRQNMRNISRGEGPKKNHQERAAKKRKYQSSEK--TSVQAAAQE 175
           AATRFIEHSLPDLT EQ Q MRN+SRGEG K+ HQE+A +KRKYQSSEK   SVQAAAQE
Sbjct: 121 AATRFIEHSLPDLTPEQLQKMRNLSRGEGKKRKHQEQAGQKRKYQSSEKPSISVQAAAQE 180

Query: 176 FLEKAAREILGHNDGGVKGPMQINNSEDGDDDE 208
           FLEKA RE+ G N+GG+KGP+QI+N  + DDD+
Sbjct: 181 FLEKAQRELFGGNNGGIKGPLQIDNMSESDDDQ 213


>Medtr3g105925.2 | Sas10/Utp3/C1D family protein | HC |
           chr3:48850027-48853697 | 20130731
          Length = 228

 Score =  311 bits (796), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 156/213 (73%), Positives = 179/213 (84%), Gaps = 5/213 (2%)

Query: 1   MVKAS-AES--AVPESVTDSVTTTLSNLQELRTHFHQFLSLTDPETLSQLPPLQRAQSLF 57
           MVK S +ES   VPE+V DSV TTLSNL+E R+HF QFL L +P+ LSQLPPL+RA SLF
Sbjct: 1   MVKGSESESCGGVPEAVMDSVNTTLSNLREFRSHFQQFLPLMNPQILSQLPPLERAHSLF 60

Query: 58  LLSKITSTLLALNLRCSGINPDDHPVKSELDRVNLYEDKLDRLLDLSKAPLRPSTTLNYQ 117
           LLSKITSTLL L LRCSG+ PDD+PVKSELDRV LY+DKL+RLLDL+KAPLRPST LN Q
Sbjct: 61  LLSKITSTLLTLKLRCSGVQPDDNPVKSELDRVELYQDKLERLLDLNKAPLRPSTMLNSQ 120

Query: 118 AATRFIEHSLPDLTSEQRQNMRNISRGEGPKKNHQERAAKKRKYQSSEK--TSVQAAAQE 175
           AATRFIEHSLPDLT EQ Q MRN+SRGEG K+ HQE+A +KRKYQSSEK   SVQAAAQE
Sbjct: 121 AATRFIEHSLPDLTPEQLQKMRNLSRGEGKKRKHQEQAGQKRKYQSSEKPSISVQAAAQE 180

Query: 176 FLEKAAREILGHNDGGVKGPMQINNSEDGDDDE 208
           FLEKA RE+ G N+GG+KGP+QI+N  + DDD+
Sbjct: 181 FLEKAQRELFGGNNGGIKGPLQIDNMSESDDDQ 213


>Medtr3g105925.4 | Sas10/Utp3/C1D family protein | HC |
           chr3:48850124-48852790 | 20130731
          Length = 228

 Score =  311 bits (796), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 156/213 (73%), Positives = 179/213 (84%), Gaps = 5/213 (2%)

Query: 1   MVKAS-AES--AVPESVTDSVTTTLSNLQELRTHFHQFLSLTDPETLSQLPPLQRAQSLF 57
           MVK S +ES   VPE+V DSV TTLSNL+E R+HF QFL L +P+ LSQLPPL+RA SLF
Sbjct: 1   MVKGSESESCGGVPEAVMDSVNTTLSNLREFRSHFQQFLPLMNPQILSQLPPLERAHSLF 60

Query: 58  LLSKITSTLLALNLRCSGINPDDHPVKSELDRVNLYEDKLDRLLDLSKAPLRPSTTLNYQ 117
           LLSKITSTLL L LRCSG+ PDD+PVKSELDRV LY+DKL+RLLDL+KAPLRPST LN Q
Sbjct: 61  LLSKITSTLLTLKLRCSGVQPDDNPVKSELDRVELYQDKLERLLDLNKAPLRPSTMLNSQ 120

Query: 118 AATRFIEHSLPDLTSEQRQNMRNISRGEGPKKNHQERAAKKRKYQSSEK--TSVQAAAQE 175
           AATRFIEHSLPDLT EQ Q MRN+SRGEG K+ HQE+A +KRKYQSSEK   SVQAAAQE
Sbjct: 121 AATRFIEHSLPDLTPEQLQKMRNLSRGEGKKRKHQEQAGQKRKYQSSEKPSISVQAAAQE 180

Query: 176 FLEKAAREILGHNDGGVKGPMQINNSEDGDDDE 208
           FLEKA RE+ G N+GG+KGP+QI+N  + DDD+
Sbjct: 181 FLEKAQRELFGGNNGGIKGPLQIDNMSESDDDQ 213


>Medtr3g105925.1 | Sas10/Utp3/C1D family protein | HC |
           chr3:48850124-48853633 | 20130731
          Length = 228

 Score =  311 bits (796), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 156/213 (73%), Positives = 179/213 (84%), Gaps = 5/213 (2%)

Query: 1   MVKAS-AES--AVPESVTDSVTTTLSNLQELRTHFHQFLSLTDPETLSQLPPLQRAQSLF 57
           MVK S +ES   VPE+V DSV TTLSNL+E R+HF QFL L +P+ LSQLPPL+RA SLF
Sbjct: 1   MVKGSESESCGGVPEAVMDSVNTTLSNLREFRSHFQQFLPLMNPQILSQLPPLERAHSLF 60

Query: 58  LLSKITSTLLALNLRCSGINPDDHPVKSELDRVNLYEDKLDRLLDLSKAPLRPSTTLNYQ 117
           LLSKITSTLL L LRCSG+ PDD+PVKSELDRV LY+DKL+RLLDL+KAPLRPST LN Q
Sbjct: 61  LLSKITSTLLTLKLRCSGVQPDDNPVKSELDRVELYQDKLERLLDLNKAPLRPSTMLNSQ 120

Query: 118 AATRFIEHSLPDLTSEQRQNMRNISRGEGPKKNHQERAAKKRKYQSSEK--TSVQAAAQE 175
           AATRFIEHSLPDLT EQ Q MRN+SRGEG K+ HQE+A +KRKYQSSEK   SVQAAAQE
Sbjct: 121 AATRFIEHSLPDLTPEQLQKMRNLSRGEGKKRKHQEQAGQKRKYQSSEKPSISVQAAAQE 180

Query: 176 FLEKAAREILGHNDGGVKGPMQINNSEDGDDDE 208
           FLEKA RE+ G N+GG+KGP+QI+N  + DDD+
Sbjct: 181 FLEKAQRELFGGNNGGIKGPLQIDNMSESDDDQ 213


>Medtr1g014130.1 | Sas10/Utp3/C1D family protein | HC |
           chr1:3109176-3113524 | 20130731
          Length = 186

 Score =  112 bits (280), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 101/170 (59%), Gaps = 35/170 (20%)

Query: 11  PESVT-DSVTTTLSNLQELRTHFHQFLSLTDPETLSQLPPLQRAQSLFLLSKITSTLLAL 69
           PES T +S+  TL N+++L++   +FL+L+DP+ LS LP LQRA SLF L+K+TSTL  L
Sbjct: 15  PESTTIESLKRTLYNVEQLQSQLPEFLALSDPDHLSTLPLLQRAHSLFSLAKLTSTLFEL 74

Query: 70  NLRCSGINPDDHPVKSELDRVNLYEDKLDRLLDLSKAPLRPSTTLNYQAATRFIEHSLPD 129
            L+C GINP+DH  KSELDR+++ + +L+RL                           PD
Sbjct: 75  KLKCRGINPNDHAFKSELDRLSVCQKRLERL---------------------------PD 107

Query: 130 LTSEQRQNMRNISRGEGPKKNHQERAAKKRKYQSSEKTSVQAAAQEFLEK 179
           L+ EQ Q+M         +K ++E+  +KRKY SSE+      ++E++EK
Sbjct: 108 LSEEQWQDMVE-------QKFYEEQTGQKRKYPSSEEQFDLIDSKEYVEK 150