Miyakogusa Predicted Gene
- Lj1g3v1788400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1788400.1 Non Characterized Hit- tr|I1P4V6|I1P4V6_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,63.01,7e-17,seg,NULL; DUF1771,Domain of unknown function
DUF1771,CUFF.27946.1
(489 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g014880.6 | Smr (small MutS-related) domain protein | HC |... 685 0.0
Medtr1g014880.1 | Smr (small MutS-related) domain protein | HC |... 670 0.0
Medtr1g014880.9 | Smr (small MutS-related) domain protein | HC |... 664 0.0
Medtr1g014880.11 | Smr (small MutS-related) domain protein | HC ... 575 e-164
Medtr1g014880.2 | Smr (small MutS-related) domain protein | HC |... 575 e-164
Medtr1g014880.10 | Smr (small MutS-related) domain protein | HC ... 543 e-154
Medtr1g014880.8 | Smr (small MutS-related) domain protein | HC |... 543 e-154
Medtr1g014880.7 | Smr (small MutS-related) domain protein | HC |... 543 e-154
Medtr1g014880.3 | Smr (small MutS-related) domain protein | HC |... 528 e-150
Medtr1g014880.5 | Smr (small MutS-related) domain protein | HC |... 527 e-150
Medtr1g014880.4 | Smr (small MutS-related) domain protein | HC |... 527 e-150
>Medtr1g014880.6 | Smr (small MutS-related) domain protein | HC |
chr1:3600828-3594680 | 20130731
Length = 577
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/492 (68%), Positives = 390/492 (79%), Gaps = 4/492 (0%)
Query: 1 MNVSKKGFQ-MDAKLFSPNKATSLNPNAAEFIPFALRXXXXXXXXXXXXXXKLTTFGAHG 59
M++SKKG D KL SPNKATSLNPNAAEFIPF+LR +LTT G+ G
Sbjct: 1 MSLSKKGGSPTDTKLSSPNKATSLNPNAAEFIPFSLRSLPSGSTSSVDATTRLTTAGSLG 60
Query: 60 KSVLGRXXXXXXXXXXXXVHQYWRCQLPDDITPDFEVMGEDESQGVNDLSLIGLSIHDDN 119
K+VL R H YWRCQLPDDITPDF+V+ E+E QG+N+LS GLSI+DDN
Sbjct: 61 KAVLDRSESSISNNSDDEAHNYWRCQLPDDITPDFKVIEEEEPQGLNNLSFAGLSINDDN 120
Query: 120 ETSTFPSSIGNRYKINEQEELSQQHFNGNNFADKFKLSNSSYSEDPSSASFLNTLAKPWD 179
E+S F S+ G+RY +NEQ+EL Q H NGN FADK + SNS+Y E+PSSASFLN+LAKPW+
Sbjct: 121 ESSMFSSAKGSRYILNEQQELPQHHLNGNTFADKLRFSNSTYREEPSSASFLNSLAKPWE 180
Query: 180 RPIGSVNQHISSGLEGLNSDDNSRHGFLDDVLAENAIVDDTNLNPLEFLASLFPGFAAES 239
RP+G+ N H+SSG E L DDN+RHGFL+DVL ENAIVD+T+ NPLEFLASLFPGFA+ES
Sbjct: 181 RPVGNNNLHVSSGQEALAYDDNARHGFLNDVLTENAIVDETDFNPLEFLASLFPGFASES 240
Query: 240 LAEVYFANGCNLHLTSEMLTQL--QDDGSFNQNPNSKTLSAPNLSAMDFPALASSDGQTA 297
LAEV+FANGC+LHLT EMLTQL Q D +F QNP+ KTLS+PNL+ MDFPALA ++GQT
Sbjct: 241 LAEVFFANGCDLHLTIEMLTQLEIQVDSNFIQNPSPKTLSSPNLTPMDFPALAPTNGQTT 300
Query: 298 STKYGVDNVYRSGNPYRSSDNDMLFFKSRSSVPSRGAIDFAAASRKLASQDSGVWKYDRN 357
+ KY DNV +SG+PY S D+L FKS SS+P+RGA DFA+A RKLASQDSG+WKYDRN
Sbjct: 301 TAKYAADNVQQSGSPYLPSGKDLLMFKSSSSIPTRGATDFASAVRKLASQDSGIWKYDRN 360
Query: 358 GFGDTAIGSTRSSNVLASGFTSGQGRVNSGDRLQKRGSAREAAVWLETGDLVANMHSELR 417
G GD + GS+RS NVLAS + GQGR N GDRLQ RGSAR A VWLETGD VANM+SELR
Sbjct: 361 GSGDASTGSSRSLNVLASAYNGGQGRNNFGDRLQNRGSARPAPVWLETGDAVANMYSELR 420
Query: 418 EEACDHARLRNAYFEQAQQAYLIGNKALAKELSVKGQLHDMHMEAAHGKAQESIYHQRNP 477
EEA DHARLRNAYFEQA+QAYLIGNKALAKELS KGQLH+MHM+ AHGKAQESIY QRNP
Sbjct: 421 EEARDHARLRNAYFEQARQAYLIGNKALAKELSAKGQLHNMHMKEAHGKAQESIYRQRNP 480
Query: 478 VAPEMRGNGRGH 489
V PEM NGRGH
Sbjct: 481 VGPEMV-NGRGH 491
>Medtr1g014880.1 | Smr (small MutS-related) domain protein | HC |
chr1:3600859-3594741 | 20130731
Length = 602
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/517 (65%), Positives = 390/517 (75%), Gaps = 29/517 (5%)
Query: 1 MNVSKKGFQ-MDAKLFSPNKATSLNPNAAEFIPFALRXXXXXXXXXXXXXXKLTTFGAHG 59
M++SKKG D KL SPNKATSLNPNAAEFIPF+LR +LTT G+ G
Sbjct: 1 MSLSKKGGSPTDTKLSSPNKATSLNPNAAEFIPFSLRSLPSGSTSSVDATTRLTTAGSLG 60
Query: 60 KSVLGRXXXXXXXXXXXXVHQYWRCQLPDDITPDFEVMGEDESQGVNDLSLIGLSIHDDN 119
K+VL R H YWRCQLPDDITPDF+V+ E+E QG+N+LS GLSI+DDN
Sbjct: 61 KAVLDRSESSISNNSDDEAHNYWRCQLPDDITPDFKVIEEEEPQGLNNLSFAGLSINDDN 120
Query: 120 ETSTFPSSIGNRYKINEQEELSQQHFNGNNFADKFKLSNSSYSEDPSSASFLNTLAKPWD 179
E+S F S+ G+RY +NEQ+EL Q H NGN FADK + SNS+Y E+PSSASFLN+LAKPW+
Sbjct: 121 ESSMFSSAKGSRYILNEQQELPQHHLNGNTFADKLRFSNSTYREEPSSASFLNSLAKPWE 180
Query: 180 RPIGSVNQHISSGLEGLNSDDNSR-------------------------HGFLDDVLAEN 214
RP+G+ N H+SSG E L DDN+R HGFL+DVL EN
Sbjct: 181 RPVGNNNLHVSSGQEALAYDDNARLGFLNDNNLHVGGGQEALAYDDNARHGFLNDVLTEN 240
Query: 215 AIVDDTNLNPLEFLASLFPGFAAESLAEVYFANGCNLHLTSEMLTQL--QDDGSFNQNPN 272
AIVD+T+ NPLEFLASLFPGFA+ESLAEV+FANGC+LHLT EMLTQL Q D +F QNP+
Sbjct: 241 AIVDETDFNPLEFLASLFPGFASESLAEVFFANGCDLHLTIEMLTQLEIQVDSNFIQNPS 300
Query: 273 SKTLSAPNLSAMDFPALASSDGQTASTKYGVDNVYRSGNPYRSSDNDMLFFKSRSSVPSR 332
KTLS+PNL+ MDFPALA ++GQT + KY DNV +SG+PY S D+L FKS SS+P+R
Sbjct: 301 PKTLSSPNLTPMDFPALAPTNGQTTTAKYAADNVQQSGSPYLPSGKDLLMFKSSSSIPTR 360
Query: 333 GAIDFAAASRKLASQDSGVWKYDRNGFGDTAIGSTRSSNVLASGFTSGQGRVNSGDRLQK 392
GA DFA+A RKLASQDSG+WKYDRNG GD + GS+RS NVLAS + GQGR N GDRLQ
Sbjct: 361 GATDFASAVRKLASQDSGIWKYDRNGSGDASTGSSRSLNVLASAYNGGQGRNNFGDRLQN 420
Query: 393 RGSAREAAVWLETGDLVANMHSELREEACDHARLRNAYFEQAQQAYLIGNKALAKELSVK 452
RGSAR A VWLETGD VANM+SELREEA DHARLRNAYFEQA+QAYLIGNKALAKELS K
Sbjct: 421 RGSARPAPVWLETGDAVANMYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSAK 480
Query: 453 GQLHDMHMEAAHGKAQESIYHQRNPVAPEMRGNGRGH 489
GQLH+MHM+ AHGKAQESIY QRNPV PEM NGRGH
Sbjct: 481 GQLHNMHMKEAHGKAQESIYRQRNPVGPEMV-NGRGH 516
>Medtr1g014880.9 | Smr (small MutS-related) domain protein | HC |
chr1:3600918-3594701 | 20130731
Length = 517
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/478 (68%), Positives = 379/478 (79%), Gaps = 3/478 (0%)
Query: 1 MNVSKKG-FQMDAKLFSPNKATSLNPNAAEFIPFALRXXXXXXXXXXXXXXKLTTFGAHG 59
M++SKKG D KL SPNKATSLNPNAAEFIPF+LR +LTT G+ G
Sbjct: 1 MSLSKKGGSPTDTKLSSPNKATSLNPNAAEFIPFSLRSLPSGSTSSVDATTRLTTAGSLG 60
Query: 60 KSVLGRXXXXXXXXXXXXVHQYWRCQLPDDITPDFEVMGEDESQGVNDLSLIGLSIHDDN 119
K+VL R H YWRCQLPDDITPDF+V+ E+E QG+N+LS GLSI+DDN
Sbjct: 61 KAVLDRSESSISNNSDDEAHNYWRCQLPDDITPDFKVIEEEEPQGLNNLSFAGLSINDDN 120
Query: 120 ETSTFPSSIGNRYKINEQEELSQQHFNGNNFADKFKLSNSSYSEDPSSASFLNTLAKPWD 179
E+S F S+ G+RY +NEQ+EL Q H NGN FADK + SNS+Y E+PSSASFLN+LAKPW+
Sbjct: 121 ESSMFSSAKGSRYILNEQQELPQHHLNGNTFADKLRFSNSTYREEPSSASFLNSLAKPWE 180
Query: 180 RPIGSVNQHISSGLEGLNSDDNSRHGFLDDVLAENAIVDDTNLNPLEFLASLFPGFAAES 239
RP+G+ N H+SSG E L DDN+RHGFL+DVL ENAIVD+T+ NPLEFLASLFPGFA+ES
Sbjct: 181 RPVGNNNLHVSSGQEALAYDDNARHGFLNDVLTENAIVDETDFNPLEFLASLFPGFASES 240
Query: 240 LAEVYFANGCNLHLTSEMLTQL--QDDGSFNQNPNSKTLSAPNLSAMDFPALASSDGQTA 297
LAEV+FANGC+LHLT EMLTQL Q D +F QNP+ KTLS+PNL+ MDFPALA ++GQT
Sbjct: 241 LAEVFFANGCDLHLTIEMLTQLEIQVDSNFIQNPSPKTLSSPNLTPMDFPALAPTNGQTT 300
Query: 298 STKYGVDNVYRSGNPYRSSDNDMLFFKSRSSVPSRGAIDFAAASRKLASQDSGVWKYDRN 357
+ KY DNV +SG+PY S D+L FKS SS+P+RGA DFA+A RKLASQDSG+WKYDRN
Sbjct: 301 TAKYAADNVQQSGSPYLPSGKDLLMFKSSSSIPTRGATDFASAVRKLASQDSGIWKYDRN 360
Query: 358 GFGDTAIGSTRSSNVLASGFTSGQGRVNSGDRLQKRGSAREAAVWLETGDLVANMHSELR 417
G GD + GS+RS NVLAS + GQGR N GDRLQ RGSAR A VWLETGD VANM+SELR
Sbjct: 361 GSGDASTGSSRSLNVLASAYNGGQGRNNFGDRLQNRGSARPAPVWLETGDAVANMYSELR 420
Query: 418 EEACDHARLRNAYFEQAQQAYLIGNKALAKELSVKGQLHDMHMEAAHGKAQESIYHQR 475
EEA DHARLRNAYFEQA+QAYLIGNKALAKELS KGQLH+MHM+ AHGKAQESIY QR
Sbjct: 421 EEARDHARLRNAYFEQARQAYLIGNKALAKELSAKGQLHNMHMKEAHGKAQESIYRQR 478
>Medtr1g014880.11 | Smr (small MutS-related) domain protein | HC |
chr1:3600828-3597384 | 20130731
Length = 464
Score = 575 bits (1483), Expect = e-164, Method: Compositional matrix adjust.
Identities = 290/462 (62%), Positives = 340/462 (73%), Gaps = 28/462 (6%)
Query: 1 MNVSKKGFQ-MDAKLFSPNKATSLNPNAAEFIPFALRXXXXXXXXXXXXXXKLTTFGAHG 59
M++SKKG D KL SPNKATSLNPNAAEFIPF+LR +LTT G+ G
Sbjct: 1 MSLSKKGGSPTDTKLSSPNKATSLNPNAAEFIPFSLRSLPSGSTSSVDATTRLTTAGSLG 60
Query: 60 KSVLGRXXXXXXXXXXXXVHQYWRCQLPDDITPDFEVMGEDESQGVNDLSLIGLSIHDDN 119
K+VL R H YWRCQLPDDITPDF+V+ E+E QG+N+LS GLSI+DDN
Sbjct: 61 KAVLDRSESSISNNSDDEAHNYWRCQLPDDITPDFKVIEEEEPQGLNNLSFAGLSINDDN 120
Query: 120 ETSTFPSSIGNRYKINEQEELSQQHFNGNNFADKFKLSNSSYSEDPSSASFLNTLAKPWD 179
E+S F S+ G+RY +NEQ+EL Q H NGN FADK + SNS+Y E+PSSASFLN+LAKPW+
Sbjct: 121 ESSMFSSAKGSRYILNEQQELPQHHLNGNTFADKLRFSNSTYREEPSSASFLNSLAKPWE 180
Query: 180 RPIGSVNQHISSGLEGLNSDDNSR-------------------------HGFLDDVLAEN 214
RP+G+ N H+SSG E L DDN+R HGFL+DVL EN
Sbjct: 181 RPVGNNNLHVSSGQEALAYDDNARLGFLNDNNLHVGGGQEALAYDDNARHGFLNDVLTEN 240
Query: 215 AIVDDTNLNPLEFLASLFPGFAAESLAEVYFANGCNLHLTSEMLTQL--QDDGSFNQNPN 272
AIVD+T+ NPLEFLASLFPGFA+ESLAEV+FANGC+LHLT EMLTQL Q D +F QNP+
Sbjct: 241 AIVDETDFNPLEFLASLFPGFASESLAEVFFANGCDLHLTIEMLTQLEIQVDSNFIQNPS 300
Query: 273 SKTLSAPNLSAMDFPALASSDGQTASTKYGVDNVYRSGNPYRSSDNDMLFFKSRSSVPSR 332
KTLS+PNL+ MDFPALA ++GQT + KY DNV +SG+PY S D+L FKS SS+P+R
Sbjct: 301 PKTLSSPNLTPMDFPALAPTNGQTTTAKYAADNVQQSGSPYLPSGKDLLMFKSSSSIPTR 360
Query: 333 GAIDFAAASRKLASQDSGVWKYDRNGFGDTAIGSTRSSNVLASGFTSGQGRVNSGDRLQK 392
GA DFA+A RKLASQDSG+WKYDRNG GD + GS+RS NVLAS + GQGR N GDRLQ
Sbjct: 361 GATDFASAVRKLASQDSGIWKYDRNGSGDASTGSSRSLNVLASAYNGGQGRNNFGDRLQN 420
Query: 393 RGSAREAAVWLETGDLVANMHSELREEACDHARLRNAYFEQA 434
RGSAR A VWLETGD VANM+SELREEA DHARLRNAYFEQ
Sbjct: 421 RGSARPAPVWLETGDAVANMYSELREEARDHARLRNAYFEQV 462
>Medtr1g014880.2 | Smr (small MutS-related) domain protein | HC |
chr1:3600828-3594741 | 20130731
Length = 469
Score = 575 bits (1481), Expect = e-164, Method: Compositional matrix adjust.
Identities = 290/461 (62%), Positives = 340/461 (73%), Gaps = 28/461 (6%)
Query: 1 MNVSKKGFQ-MDAKLFSPNKATSLNPNAAEFIPFALRXXXXXXXXXXXXXXKLTTFGAHG 59
M++SKKG D KL SPNKATSLNPNAAEFIPF+LR +LTT G+ G
Sbjct: 1 MSLSKKGGSPTDTKLSSPNKATSLNPNAAEFIPFSLRSLPSGSTSSVDATTRLTTAGSLG 60
Query: 60 KSVLGRXXXXXXXXXXXXVHQYWRCQLPDDITPDFEVMGEDESQGVNDLSLIGLSIHDDN 119
K+VL R H YWRCQLPDDITPDF+V+ E+E QG+N+LS GLSI+DDN
Sbjct: 61 KAVLDRSESSISNNSDDEAHNYWRCQLPDDITPDFKVIEEEEPQGLNNLSFAGLSINDDN 120
Query: 120 ETSTFPSSIGNRYKINEQEELSQQHFNGNNFADKFKLSNSSYSEDPSSASFLNTLAKPWD 179
E+S F S+ G+RY +NEQ+EL Q H NGN FADK + SNS+Y E+PSSASFLN+LAKPW+
Sbjct: 121 ESSMFSSAKGSRYILNEQQELPQHHLNGNTFADKLRFSNSTYREEPSSASFLNSLAKPWE 180
Query: 180 RPIGSVNQHISSGLEGLNSDDNSR-------------------------HGFLDDVLAEN 214
RP+G+ N H+SSG E L DDN+R HGFL+DVL EN
Sbjct: 181 RPVGNNNLHVSSGQEALAYDDNARLGFLNDNNLHVGGGQEALAYDDNARHGFLNDVLTEN 240
Query: 215 AIVDDTNLNPLEFLASLFPGFAAESLAEVYFANGCNLHLTSEMLTQL--QDDGSFNQNPN 272
AIVD+T+ NPLEFLASLFPGFA+ESLAEV+FANGC+LHLT EMLTQL Q D +F QNP+
Sbjct: 241 AIVDETDFNPLEFLASLFPGFASESLAEVFFANGCDLHLTIEMLTQLEIQVDSNFIQNPS 300
Query: 273 SKTLSAPNLSAMDFPALASSDGQTASTKYGVDNVYRSGNPYRSSDNDMLFFKSRSSVPSR 332
KTLS+PNL+ MDFPALA ++GQT + KY DNV +SG+PY S D+L FKS SS+P+R
Sbjct: 301 PKTLSSPNLTPMDFPALAPTNGQTTTAKYAADNVQQSGSPYLPSGKDLLMFKSSSSIPTR 360
Query: 333 GAIDFAAASRKLASQDSGVWKYDRNGFGDTAIGSTRSSNVLASGFTSGQGRVNSGDRLQK 392
GA DFA+A RKLASQDSG+WKYDRNG GD + GS+RS NVLAS + GQGR N GDRLQ
Sbjct: 361 GATDFASAVRKLASQDSGIWKYDRNGSGDASTGSSRSLNVLASAYNGGQGRNNFGDRLQN 420
Query: 393 RGSAREAAVWLETGDLVANMHSELREEACDHARLRNAYFEQ 433
RGSAR A VWLETGD VANM+SELREEA DHARLRNAYFEQ
Sbjct: 421 RGSARPAPVWLETGDAVANMYSELREEARDHARLRNAYFEQ 461
>Medtr1g014880.10 | Smr (small MutS-related) domain protein | HC |
chr1:3600828-3594741 | 20130731
Length = 478
Score = 543 bits (1398), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/412 (65%), Positives = 317/412 (76%), Gaps = 3/412 (0%)
Query: 1 MNVSKKG-FQMDAKLFSPNKATSLNPNAAEFIPFALRXXXXXXXXXXXXXXKLTTFGAHG 59
M++SKKG D KL SPNKATSLNPNAAEFIPF+LR +LTT G+ G
Sbjct: 1 MSLSKKGGSPTDTKLSSPNKATSLNPNAAEFIPFSLRSLPSGSTSSVDATTRLTTAGSLG 60
Query: 60 KSVLGRXXXXXXXXXXXXVHQYWRCQLPDDITPDFEVMGEDESQGVNDLSLIGLSIHDDN 119
K+VL R H YWRCQLPDDITPDF+V+ E+E QG+N+LS GLSI+DDN
Sbjct: 61 KAVLDRSESSISNNSDDEAHNYWRCQLPDDITPDFKVIEEEEPQGLNNLSFAGLSINDDN 120
Query: 120 ETSTFPSSIGNRYKINEQEELSQQHFNGNNFADKFKLSNSSYSEDPSSASFLNTLAKPWD 179
E+S F S+ G+RY +NEQ+EL Q H NGN FADK + SNS+Y E+PSSASFLN+LAKPW+
Sbjct: 121 ESSMFSSAKGSRYILNEQQELPQHHLNGNTFADKLRFSNSTYREEPSSASFLNSLAKPWE 180
Query: 180 RPIGSVNQHISSGLEGLNSDDNSRHGFLDDVLAENAIVDDTNLNPLEFLASLFPGFAAES 239
RP+G+ N H+SSG E L DDN+RHGFL+DVL ENAIVD+T+ NPLEFLASLFPGFA+ES
Sbjct: 181 RPVGNNNLHVSSGQEALAYDDNARHGFLNDVLTENAIVDETDFNPLEFLASLFPGFASES 240
Query: 240 LAEVYFANGCNLHLTSEMLTQL--QDDGSFNQNPNSKTLSAPNLSAMDFPALASSDGQTA 297
LAEV+FANGC+LHLT EMLTQL Q D +F QNP+ KTLS+PNL+ MDFPALA ++GQT
Sbjct: 241 LAEVFFANGCDLHLTIEMLTQLEIQVDSNFIQNPSPKTLSSPNLTPMDFPALAPTNGQTT 300
Query: 298 STKYGVDNVYRSGNPYRSSDNDMLFFKSRSSVPSRGAIDFAAASRKLASQDSGVWKYDRN 357
+ KY DNV +SG+PY S D+L FKS SS+P+RGA DFA+A RKLASQDSG+WKYDRN
Sbjct: 301 TAKYAADNVQQSGSPYLPSGKDLLMFKSSSSIPTRGATDFASAVRKLASQDSGIWKYDRN 360
Query: 358 GFGDTAIGSTRSSNVLASGFTSGQGRVNSGDRLQKRGSAREAAVWLETGDLV 409
G GD + GS+RS NVLAS + GQGR N GDRLQ RGSAR A VWLETGD V
Sbjct: 361 GSGDASTGSSRSLNVLASAYNGGQGRNNFGDRLQNRGSARPAPVWLETGDAV 412
>Medtr1g014880.8 | Smr (small MutS-related) domain protein | HC |
chr1:3600918-3594701 | 20130731
Length = 478
Score = 543 bits (1398), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/412 (65%), Positives = 317/412 (76%), Gaps = 3/412 (0%)
Query: 1 MNVSKKG-FQMDAKLFSPNKATSLNPNAAEFIPFALRXXXXXXXXXXXXXXKLTTFGAHG 59
M++SKKG D KL SPNKATSLNPNAAEFIPF+LR +LTT G+ G
Sbjct: 1 MSLSKKGGSPTDTKLSSPNKATSLNPNAAEFIPFSLRSLPSGSTSSVDATTRLTTAGSLG 60
Query: 60 KSVLGRXXXXXXXXXXXXVHQYWRCQLPDDITPDFEVMGEDESQGVNDLSLIGLSIHDDN 119
K+VL R H YWRCQLPDDITPDF+V+ E+E QG+N+LS GLSI+DDN
Sbjct: 61 KAVLDRSESSISNNSDDEAHNYWRCQLPDDITPDFKVIEEEEPQGLNNLSFAGLSINDDN 120
Query: 120 ETSTFPSSIGNRYKINEQEELSQQHFNGNNFADKFKLSNSSYSEDPSSASFLNTLAKPWD 179
E+S F S+ G+RY +NEQ+EL Q H NGN FADK + SNS+Y E+PSSASFLN+LAKPW+
Sbjct: 121 ESSMFSSAKGSRYILNEQQELPQHHLNGNTFADKLRFSNSTYREEPSSASFLNSLAKPWE 180
Query: 180 RPIGSVNQHISSGLEGLNSDDNSRHGFLDDVLAENAIVDDTNLNPLEFLASLFPGFAAES 239
RP+G+ N H+SSG E L DDN+RHGFL+DVL ENAIVD+T+ NPLEFLASLFPGFA+ES
Sbjct: 181 RPVGNNNLHVSSGQEALAYDDNARHGFLNDVLTENAIVDETDFNPLEFLASLFPGFASES 240
Query: 240 LAEVYFANGCNLHLTSEMLTQL--QDDGSFNQNPNSKTLSAPNLSAMDFPALASSDGQTA 297
LAEV+FANGC+LHLT EMLTQL Q D +F QNP+ KTLS+PNL+ MDFPALA ++GQT
Sbjct: 241 LAEVFFANGCDLHLTIEMLTQLEIQVDSNFIQNPSPKTLSSPNLTPMDFPALAPTNGQTT 300
Query: 298 STKYGVDNVYRSGNPYRSSDNDMLFFKSRSSVPSRGAIDFAAASRKLASQDSGVWKYDRN 357
+ KY DNV +SG+PY S D+L FKS SS+P+RGA DFA+A RKLASQDSG+WKYDRN
Sbjct: 301 TAKYAADNVQQSGSPYLPSGKDLLMFKSSSSIPTRGATDFASAVRKLASQDSGIWKYDRN 360
Query: 358 GFGDTAIGSTRSSNVLASGFTSGQGRVNSGDRLQKRGSAREAAVWLETGDLV 409
G GD + GS+RS NVLAS + GQGR N GDRLQ RGSAR A VWLETGD V
Sbjct: 361 GSGDASTGSSRSLNVLASAYNGGQGRNNFGDRLQNRGSARPAPVWLETGDAV 412
>Medtr1g014880.7 | Smr (small MutS-related) domain protein | HC |
chr1:3600828-3594680 | 20130731
Length = 478
Score = 543 bits (1398), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/412 (65%), Positives = 317/412 (76%), Gaps = 3/412 (0%)
Query: 1 MNVSKKG-FQMDAKLFSPNKATSLNPNAAEFIPFALRXXXXXXXXXXXXXXKLTTFGAHG 59
M++SKKG D KL SPNKATSLNPNAAEFIPF+LR +LTT G+ G
Sbjct: 1 MSLSKKGGSPTDTKLSSPNKATSLNPNAAEFIPFSLRSLPSGSTSSVDATTRLTTAGSLG 60
Query: 60 KSVLGRXXXXXXXXXXXXVHQYWRCQLPDDITPDFEVMGEDESQGVNDLSLIGLSIHDDN 119
K+VL R H YWRCQLPDDITPDF+V+ E+E QG+N+LS GLSI+DDN
Sbjct: 61 KAVLDRSESSISNNSDDEAHNYWRCQLPDDITPDFKVIEEEEPQGLNNLSFAGLSINDDN 120
Query: 120 ETSTFPSSIGNRYKINEQEELSQQHFNGNNFADKFKLSNSSYSEDPSSASFLNTLAKPWD 179
E+S F S+ G+RY +NEQ+EL Q H NGN FADK + SNS+Y E+PSSASFLN+LAKPW+
Sbjct: 121 ESSMFSSAKGSRYILNEQQELPQHHLNGNTFADKLRFSNSTYREEPSSASFLNSLAKPWE 180
Query: 180 RPIGSVNQHISSGLEGLNSDDNSRHGFLDDVLAENAIVDDTNLNPLEFLASLFPGFAAES 239
RP+G+ N H+SSG E L DDN+RHGFL+DVL ENAIVD+T+ NPLEFLASLFPGFA+ES
Sbjct: 181 RPVGNNNLHVSSGQEALAYDDNARHGFLNDVLTENAIVDETDFNPLEFLASLFPGFASES 240
Query: 240 LAEVYFANGCNLHLTSEMLTQL--QDDGSFNQNPNSKTLSAPNLSAMDFPALASSDGQTA 297
LAEV+FANGC+LHLT EMLTQL Q D +F QNP+ KTLS+PNL+ MDFPALA ++GQT
Sbjct: 241 LAEVFFANGCDLHLTIEMLTQLEIQVDSNFIQNPSPKTLSSPNLTPMDFPALAPTNGQTT 300
Query: 298 STKYGVDNVYRSGNPYRSSDNDMLFFKSRSSVPSRGAIDFAAASRKLASQDSGVWKYDRN 357
+ KY DNV +SG+PY S D+L FKS SS+P+RGA DFA+A RKLASQDSG+WKYDRN
Sbjct: 301 TAKYAADNVQQSGSPYLPSGKDLLMFKSSSSIPTRGATDFASAVRKLASQDSGIWKYDRN 360
Query: 358 GFGDTAIGSTRSSNVLASGFTSGQGRVNSGDRLQKRGSAREAAVWLETGDLV 409
G GD + GS+RS NVLAS + GQGR N GDRLQ RGSAR A VWLETGD V
Sbjct: 361 GSGDASTGSSRSLNVLASAYNGGQGRNNFGDRLQNRGSARPAPVWLETGDAV 412
>Medtr1g014880.3 | Smr (small MutS-related) domain protein | HC |
chr1:3600828-3594741 | 20130731
Length = 503
Score = 528 bits (1361), Expect = e-150, Method: Compositional matrix adjust.
Identities = 268/437 (61%), Positives = 317/437 (72%), Gaps = 28/437 (6%)
Query: 1 MNVSKKG-FQMDAKLFSPNKATSLNPNAAEFIPFALRXXXXXXXXXXXXXXKLTTFGAHG 59
M++SKKG D KL SPNKATSLNPNAAEFIPF+LR +LTT G+ G
Sbjct: 1 MSLSKKGGSPTDTKLSSPNKATSLNPNAAEFIPFSLRSLPSGSTSSVDATTRLTTAGSLG 60
Query: 60 KSVLGRXXXXXXXXXXXXVHQYWRCQLPDDITPDFEVMGEDESQGVNDLSLIGLSIHDDN 119
K+VL R H YWRCQLPDDITPDF+V+ E+E QG+N+LS GLSI+DDN
Sbjct: 61 KAVLDRSESSISNNSDDEAHNYWRCQLPDDITPDFKVIEEEEPQGLNNLSFAGLSINDDN 120
Query: 120 ETSTFPSSIGNRYKINEQEELSQQHFNGNNFADKFKLSNSSYSEDPSSASFLNTLAKPWD 179
E+S F S+ G+RY +NEQ+EL Q H NGN FADK + SNS+Y E+PSSASFLN+LAKPW+
Sbjct: 121 ESSMFSSAKGSRYILNEQQELPQHHLNGNTFADKLRFSNSTYREEPSSASFLNSLAKPWE 180
Query: 180 RPIGSVNQHISS-------------------------GLEGLNSDDNSRHGFLDDVLAEN 214
RP+G+ N H+SS G E L DDN+RHGFL+DVL EN
Sbjct: 181 RPVGNNNLHVSSGQEALAYDDNARLGFLNDNNLHVGGGQEALAYDDNARHGFLNDVLTEN 240
Query: 215 AIVDDTNLNPLEFLASLFPGFAAESLAEVYFANGCNLHLTSEMLTQL--QDDGSFNQNPN 272
AIVD+T+ NPLEFLASLFPGFA+ESLAEV+FANGC+LHLT EMLTQL Q D +F QNP+
Sbjct: 241 AIVDETDFNPLEFLASLFPGFASESLAEVFFANGCDLHLTIEMLTQLEIQVDSNFIQNPS 300
Query: 273 SKTLSAPNLSAMDFPALASSDGQTASTKYGVDNVYRSGNPYRSSDNDMLFFKSRSSVPSR 332
KTLS+PNL+ MDFPALA ++GQT + KY DNV +SG+PY S D+L FKS SS+P+R
Sbjct: 301 PKTLSSPNLTPMDFPALAPTNGQTTTAKYAADNVQQSGSPYLPSGKDLLMFKSSSSIPTR 360
Query: 333 GAIDFAAASRKLASQDSGVWKYDRNGFGDTAIGSTRSSNVLASGFTSGQGRVNSGDRLQK 392
GA DFA+A RKLASQDSG+WKYDRNG GD + GS+RS NVLAS + GQGR N GDRLQ
Sbjct: 361 GATDFASAVRKLASQDSGIWKYDRNGSGDASTGSSRSLNVLASAYNGGQGRNNFGDRLQN 420
Query: 393 RGSAREAAVWLETGDLV 409
RGSAR A VWLETGD V
Sbjct: 421 RGSARPAPVWLETGDAV 437
>Medtr1g014880.5 | Smr (small MutS-related) domain protein | HC |
chr1:3600828-3595369 | 20130731
Length = 517
Score = 527 bits (1358), Expect = e-150, Method: Compositional matrix adjust.
Identities = 268/437 (61%), Positives = 317/437 (72%), Gaps = 28/437 (6%)
Query: 1 MNVSKKGFQ-MDAKLFSPNKATSLNPNAAEFIPFALRXXXXXXXXXXXXXXKLTTFGAHG 59
M++SKKG D KL SPNKATSLNPNAAEFIPF+LR +LTT G+ G
Sbjct: 1 MSLSKKGGSPTDTKLSSPNKATSLNPNAAEFIPFSLRSLPSGSTSSVDATTRLTTAGSLG 60
Query: 60 KSVLGRXXXXXXXXXXXXVHQYWRCQLPDDITPDFEVMGEDESQGVNDLSLIGLSIHDDN 119
K+VL R H YWRCQLPDDITPDF+V+ E+E QG+N+LS GLSI+DDN
Sbjct: 61 KAVLDRSESSISNNSDDEAHNYWRCQLPDDITPDFKVIEEEEPQGLNNLSFAGLSINDDN 120
Query: 120 ETSTFPSSIGNRYKINEQEELSQQHFNGNNFADKFKLSNSSYSEDPSSASFLNTLAKPWD 179
E+S F S+ G+RY +NEQ+EL Q H NGN FADK + SNS+Y E+PSSASFLN+LAKPW+
Sbjct: 121 ESSMFSSAKGSRYILNEQQELPQHHLNGNTFADKLRFSNSTYREEPSSASFLNSLAKPWE 180
Query: 180 RPIGSVNQHISS-------------------------GLEGLNSDDNSRHGFLDDVLAEN 214
RP+G+ N H+SS G E L DDN+RHGFL+DVL EN
Sbjct: 181 RPVGNNNLHVSSGQEALAYDDNARLGFLNDNNLHVGGGQEALAYDDNARHGFLNDVLTEN 240
Query: 215 AIVDDTNLNPLEFLASLFPGFAAESLAEVYFANGCNLHLTSEMLTQL--QDDGSFNQNPN 272
AIVD+T+ NPLEFLASLFPGFA+ESLAEV+FANGC+LHLT EMLTQL Q D +F QNP+
Sbjct: 241 AIVDETDFNPLEFLASLFPGFASESLAEVFFANGCDLHLTIEMLTQLEIQVDSNFIQNPS 300
Query: 273 SKTLSAPNLSAMDFPALASSDGQTASTKYGVDNVYRSGNPYRSSDNDMLFFKSRSSVPSR 332
KTLS+PNL+ MDFPALA ++GQT + KY DNV +SG+PY S D+L FKS SS+P+R
Sbjct: 301 PKTLSSPNLTPMDFPALAPTNGQTTTAKYAADNVQQSGSPYLPSGKDLLMFKSSSSIPTR 360
Query: 333 GAIDFAAASRKLASQDSGVWKYDRNGFGDTAIGSTRSSNVLASGFTSGQGRVNSGDRLQK 392
GA DFA+A RKLASQDSG+WKYDRNG GD + GS+RS NVLAS + GQGR N GDRLQ
Sbjct: 361 GATDFASAVRKLASQDSGIWKYDRNGSGDASTGSSRSLNVLASAYNGGQGRNNFGDRLQN 420
Query: 393 RGSAREAAVWLETGDLV 409
RGSAR A VWLETGD V
Sbjct: 421 RGSARPAPVWLETGDAV 437
>Medtr1g014880.4 | Smr (small MutS-related) domain protein | HC |
chr1:3600828-3594714 | 20130731
Length = 517
Score = 527 bits (1358), Expect = e-150, Method: Compositional matrix adjust.
Identities = 268/437 (61%), Positives = 317/437 (72%), Gaps = 28/437 (6%)
Query: 1 MNVSKKGFQ-MDAKLFSPNKATSLNPNAAEFIPFALRXXXXXXXXXXXXXXKLTTFGAHG 59
M++SKKG D KL SPNKATSLNPNAAEFIPF+LR +LTT G+ G
Sbjct: 1 MSLSKKGGSPTDTKLSSPNKATSLNPNAAEFIPFSLRSLPSGSTSSVDATTRLTTAGSLG 60
Query: 60 KSVLGRXXXXXXXXXXXXVHQYWRCQLPDDITPDFEVMGEDESQGVNDLSLIGLSIHDDN 119
K+VL R H YWRCQLPDDITPDF+V+ E+E QG+N+LS GLSI+DDN
Sbjct: 61 KAVLDRSESSISNNSDDEAHNYWRCQLPDDITPDFKVIEEEEPQGLNNLSFAGLSINDDN 120
Query: 120 ETSTFPSSIGNRYKINEQEELSQQHFNGNNFADKFKLSNSSYSEDPSSASFLNTLAKPWD 179
E+S F S+ G+RY +NEQ+EL Q H NGN FADK + SNS+Y E+PSSASFLN+LAKPW+
Sbjct: 121 ESSMFSSAKGSRYILNEQQELPQHHLNGNTFADKLRFSNSTYREEPSSASFLNSLAKPWE 180
Query: 180 RPIGSVNQHISS-------------------------GLEGLNSDDNSRHGFLDDVLAEN 214
RP+G+ N H+SS G E L DDN+RHGFL+DVL EN
Sbjct: 181 RPVGNNNLHVSSGQEALAYDDNARLGFLNDNNLHVGGGQEALAYDDNARHGFLNDVLTEN 240
Query: 215 AIVDDTNLNPLEFLASLFPGFAAESLAEVYFANGCNLHLTSEMLTQL--QDDGSFNQNPN 272
AIVD+T+ NPLEFLASLFPGFA+ESLAEV+FANGC+LHLT EMLTQL Q D +F QNP+
Sbjct: 241 AIVDETDFNPLEFLASLFPGFASESLAEVFFANGCDLHLTIEMLTQLEIQVDSNFIQNPS 300
Query: 273 SKTLSAPNLSAMDFPALASSDGQTASTKYGVDNVYRSGNPYRSSDNDMLFFKSRSSVPSR 332
KTLS+PNL+ MDFPALA ++GQT + KY DNV +SG+PY S D+L FKS SS+P+R
Sbjct: 301 PKTLSSPNLTPMDFPALAPTNGQTTTAKYAADNVQQSGSPYLPSGKDLLMFKSSSSIPTR 360
Query: 333 GAIDFAAASRKLASQDSGVWKYDRNGFGDTAIGSTRSSNVLASGFTSGQGRVNSGDRLQK 392
GA DFA+A RKLASQDSG+WKYDRNG GD + GS+RS NVLAS + GQGR N GDRLQ
Sbjct: 361 GATDFASAVRKLASQDSGIWKYDRNGSGDASTGSSRSLNVLASAYNGGQGRNNFGDRLQN 420
Query: 393 RGSAREAAVWLETGDLV 409
RGSAR A VWLETGD V
Sbjct: 421 RGSARPAPVWLETGDAV 437