Miyakogusa Predicted Gene

Lj1g3v1788380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1788380.1 tr|A9S7E1|A9S7E1_PHYPA Ctr family transporter
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_1,42.66,8e-19,COPPER TRANSPORTER,NULL; SOLUTE CARRIER
FAMILY 31 (COPPER TRANSPORTERS),Ctr copper transporter;
seg,,CUFF.27949.1
         (143 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g105330.1 | Ctr family copper transporter | HC | chr3:4855...   187   3e-48
Medtr1g015000.1 | Ctr family copper transporter | HC | chr1:3664...   166   9e-42
Medtr4g065123.1 | Ctr family copper transporter | HC | chr4:2450...    70   8e-13
Medtr4g065660.1 | Ctr family copper transporter | HC | chr4:2451...    66   1e-11
Medtr4g064963.1 | Ctr family copper transporter | HC | chr4:2429...    65   2e-11
Medtr0027s0220.1 | Ctr family copper transporter | HC | scaffold...    65   3e-11
Medtr7g066070.1 | Ctr family copper transporter | HC | chr7:2402...    64   3e-11

>Medtr3g105330.1 | Ctr family copper transporter | HC |
           chr3:48558375-48557635 | 20130731
          Length = 143

 Score =  187 bits (475), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 90/143 (62%), Positives = 102/143 (71%)

Query: 1   MMHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPV 60
           MMHMTFYW KKVT+LFDSWKTDSWTSY LSLLAC I+++FYQ LENRRIRLKL A+GKP 
Sbjct: 1   MMHMTFYWSKKVTLLFDSWKTDSWTSYALSLLACLIVSIFYQFLENRRIRLKLLASGKPF 60

Query: 61  PLEIETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLA 120
           P  IE PL+RR               ++LFG+SS IGY LML+VMS+NGGVF+AIVVGLA
Sbjct: 61  PAAIEAPLLRRTFAGSGAKLGVRVAGAVLFGLSSAIGYFLMLSVMSYNGGVFIAIVVGLA 120

Query: 121 FGYFFFRXXXXXXXXXXXXCACA 143
            GY  FR            CACA
Sbjct: 121 VGYLLFRSDGEDSVVVDSSCACA 143


>Medtr1g015000.1 | Ctr family copper transporter | HC |
           chr1:3664002-3664639 | 20130731
          Length = 142

 Score =  166 bits (419), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 89/147 (60%), Positives = 101/147 (68%), Gaps = 9/147 (6%)

Query: 1   MMHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAA-GKP 59
           MMHMT YWGK VT+LFDSWKT+SWTSY+LSL+ACFIIA FYQ LEN RIRLK F+  G+ 
Sbjct: 1   MMHMTLYWGKNVTLLFDSWKTNSWTSYLLSLIACFIIATFYQYLENLRIRLKFFSGEGRT 60

Query: 60  VPL-EIETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVG 118
            P+ EI TPL+                 S+LFGV+S IGYLLMLA+MSFNGGVF+AIVVG
Sbjct: 61  TPVPEIRTPLL-----GLNKVSRNKVVESVLFGVNSAIGYLLMLAIMSFNGGVFLAIVVG 115

Query: 119 LAFGYFFFRXX--XXXXXXXXXXCACA 143
           L FGYF FR              CACA
Sbjct: 116 LTFGYFLFRSQGDEEAAVVVDNSCACA 142


>Medtr4g065123.1 | Ctr family copper transporter | HC |
           chr4:24509045-24508579 | 20130731
          Length = 141

 Score = 69.7 bits (169), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 24/124 (19%)

Query: 1   MMHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPV 60
           M+HMTF+WGK   ILF++W   + + Y+++L   FI ++  ++L         +   KP 
Sbjct: 27  MIHMTFFWGKDSLILFNNWPAGNTSKYVMALFMIFIASMLMELLS--------YTPFKPG 78

Query: 61  PLEIETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLA 120
              +   L++                ++L  +  G+ YL+MLA+MSFNGGVF+ +V+G A
Sbjct: 79  SNRMVAGLVQ----------------TLLHVLRVGLAYLIMLALMSFNGGVFLVVVLGHA 122

Query: 121 FGYF 124
            G+F
Sbjct: 123 LGFF 126


>Medtr4g065660.1 | Ctr family copper transporter | HC |
           chr4:24511543-24510225 | 20130731
          Length = 153

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 23/121 (19%)

Query: 5   TFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPVPLEI 64
           TF+WGK   ILFD+W   +   Y+L+L+  F +++  + L + R         KP    I
Sbjct: 35  TFFWGKDALILFDNWPAGNSGKYVLALILVFAMSILIEFLSSTRFI-------KPGSNPI 87

Query: 65  ETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLAFGYF 124
              L++                ++L  +  G+ YL+MLA+MSFNGGVF+  V+G A G+F
Sbjct: 88  VAGLVQ----------------TLLHVLRVGLAYLVMLALMSFNGGVFLVAVLGHAVGFF 131

Query: 125 F 125
           F
Sbjct: 132 F 132


>Medtr4g064963.1 | Ctr family copper transporter | HC |
           chr4:24296302-24295511 | 20130731
          Length = 165

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 23/120 (19%)

Query: 5   TFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPVPLEI 64
           TF+WGK   ILF++W       Y+L+L+  F++AV  ++L   R         KP    +
Sbjct: 46  TFFWGKDALILFNNWPNGDTGMYVLALILVFVMAVLIELLSRTRFI-------KPGSNHV 98

Query: 65  ETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLAFGYF 124
              L +                ++L  +  G+ YL+MLA+MSFNGGVF+  V+G A G+F
Sbjct: 99  AAGLFQ----------------TLLHVLRVGLAYLVMLALMSFNGGVFLVAVLGHALGFF 142


>Medtr0027s0220.1 | Ctr family copper transporter | HC |
           scaffold0027:120533-119940 | 20130731
          Length = 149

 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 22/126 (17%)

Query: 2   MHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKP-V 60
           +H +FYWG  V ILF  W  DS   Y ++L+  F++++  + L    I +K+    KP  
Sbjct: 27  IHTSFYWGHNVDILFHCWPGDSAVMYAVALILVFVMSLLVEWLSFTNI-VKV----KPGT 81

Query: 61  PLEIETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGLA 120
             ++   L+R                  L+GV +G  YL+MLAVMSFNGGVF+A + G  
Sbjct: 82  SNDVVGSLLRTG----------------LYGVRTGFSYLVMLAVMSFNGGVFLAAIGGHV 125

Query: 121 FGYFFF 126
            G+  F
Sbjct: 126 IGFMVF 131


>Medtr7g066070.1 | Ctr family copper transporter | HC |
           chr7:24028382-24026681 | 20130731
          Length = 145

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 37/133 (27%)

Query: 2   MHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAGKPVP 61
           M M+F+WGK   +LF  W  +S   YIL++L  FI+A+  +VL N+              
Sbjct: 22  MQMSFFWGKNAIVLFSGWPNNSLGMYILAILFVFILALAAEVLSNQ-------------- 67

Query: 62  LEIETPLIRRXXXXXXXXXXXXXXXSILFGVSSGIG-------YLLMLAVMSFNGGVFVA 114
                P I+R                    + SG+        YLLMLAVMSFN G+F+A
Sbjct: 68  -----PSIKRGTNPLKGGL-----------IQSGVYFFRISFIYLLMLAVMSFNVGIFIA 111

Query: 115 IVVGLAFGYFFFR 127
            V+G + G+F  R
Sbjct: 112 AVLGHSLGFFVAR 124