Miyakogusa Predicted Gene

Lj1g3v1788180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1788180.1 Non Characterized Hit- tr|I1IFV4|I1IFV4_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,36.26,7e-19,
,CUFF.27931.1
         (227 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g105080.1 | ferredoxin-like protein | HC | chr3:48449600-4...   377   e-105
Medtr8g009260.1 | ferredoxin-like protein | HC | chr8:2093925-20...   169   1e-42

>Medtr3g105080.1 | ferredoxin-like protein | HC |
           chr3:48449600-48452552 | 20130731
          Length = 229

 Score =  377 bits (969), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/231 (80%), Positives = 205/231 (88%), Gaps = 6/231 (2%)

Query: 1   MAKLY----LVVILSFLHSASTGSAATNTQIKVTNNPADKLVAAINENRTAYKVSELYDN 56
           MAK +    L  ILSFL     G++ + TQIK+T+NPADKLVAAINENRTA+K S L+DN
Sbjct: 1   MAKSFTLCCLFFILSFL--LGLGASTSATQIKITDNPADKLVAAINENRTAHKDSSLFDN 58

Query: 57  AGLACIALQYIKAYQGDCGAVGGPDAKKPPESQFAEVFAPNCGVKASSLAPITGRFLGCQ 116
            GLAC+ALQYIKAYQGDCGAVGG DAKKPPESQFAE FAPNCGVKAS+LA ITGRFLGCQ
Sbjct: 59  PGLACLALQYIKAYQGDCGAVGGSDAKKPPESQFAEAFAPNCGVKASTLARITGRFLGCQ 118

Query: 117 TKYVHAPEAFSEVLIQNQRSLEILHSKNHTQVGAAVTGTDGGSPYFWCVLFSGGKPNSTF 176
           TKYVHAPEAFSE+LI+N++SL+IL+SKNHTQVGAAVTGTDGGSPYFWCVLFS GKPNSTF
Sbjct: 119 TKYVHAPEAFSEILIRNEKSLDILYSKNHTQVGAAVTGTDGGSPYFWCVLFSNGKPNSTF 178

Query: 177 AFEGGVAKLTKPGCFSGANDECSGAHDWSPLSVMWLFAASVLIALGFAFPL 227
           AFEGGVAK TKPGC+SGAND CSGAH WSP+S+MWLF ASV IA+GFAFPL
Sbjct: 179 AFEGGVAKDTKPGCYSGANDVCSGAHVWSPVSLMWLFVASVSIAMGFAFPL 229


>Medtr8g009260.1 | ferredoxin-like protein | HC |
           chr8:2093925-2090866 | 20130731
          Length = 223

 Score =  169 bits (429), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 83/191 (43%), Positives = 116/191 (60%), Gaps = 2/191 (1%)

Query: 32  NPADKLVAAINENRTAYKVSELYDNAGLACIALQYIKAYQGDCGAVGGPDAKKPPESQFA 91
           NPA ++V  +N+NRT  K+  L D+ GL C+ALQY++  +G+C      + K PPE  F 
Sbjct: 30  NPATEIVDILNKNRTDQKLHNLNDSPGLGCMALQYVELCKGNCTDNNVVNCK-PPEDDFV 88

Query: 92  EVFAPNCGVKASSLAPITGRFLGCQTKYVHAPEAFSEVLIQNQRSLEILHSKNHTQVGAA 151
           EVFAPNCG++  +   ITG  +GCQ KY+    AFS++LI++++SL +L +K+HT+VG  
Sbjct: 89  EVFAPNCGIELPTFGTITGHIVGCQRKYLEPSLAFSQILIKDKKSLSLLRNKSHTEVGVG 148

Query: 152 VTGTDGGSPYFWCVLFSGGKPNSTFAFEG-GVAKLTKPGCFSGANDECSGAHDWSPLSVM 210
           + G     P+FWCVLF+ GK NSTF  E  G     K GC+SG+N  CS        S  
Sbjct: 149 LVGLHKKGPFFWCVLFTDGKANSTFVLENRGAGIKQKKGCYSGSNTPCSRGQKHGVSSSN 208

Query: 211 WLFAASVLIAL 221
           + F   V I L
Sbjct: 209 FFFMCYVFILL 219