Miyakogusa Predicted Gene
- Lj1g3v1787530.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1787530.1 Non Characterized Hit- tr|G7I8Y6|G7I8Y6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,48.76,0.00000000005,seg,NULL,
NODE_67318_length_710_cov_28.715492.path1.1
(208 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g015040.1 | transmembrane protein, putative | HC | chr1:36... 50 2e-06
>Medtr1g015040.1 | transmembrane protein, putative | HC |
chr1:3682071-3681008 | 20130731
Length = 239
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 18 MGSDSKSLRSIKKSIFSCIFQVVFMGLALLATVTSE-DNKVEAPSTSSSLWCITECGTCP 76
MG + K+L I KS F+ +VFM L L A T E ++KVE PS S L CI+EC TCP
Sbjct: 1 MGHN-KNLGFITKSWFAWTTNIVFMLLVLFANRTLEIEDKVEEPS--SGLLCISECVTCP 57
Query: 77 LIC 79
IC
Sbjct: 58 TIC 60