Miyakogusa Predicted Gene

Lj1g3v1787450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1787450.1 tr|C1N7G2|C1N7G2_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_5368,44.57,0.00000000000006,Multidrug resistance efflux
transporter EmrE,NULL; Mg_trans_NIPA,Magnesium transporter NIPA;
seg,NUL,CUFF.27869.1
         (344 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g015820.1 | magnesium transporter NIPA protein | HC | chr1...   475   e-134

>Medtr1g015820.1 | magnesium transporter NIPA protein | HC |
           chr1:4067354-4073384 | 20130731
          Length = 343

 Score =  475 bits (1223), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 241/346 (69%), Positives = 267/346 (77%), Gaps = 5/346 (1%)

Query: 1   MWESIVLTVVATAGNNIGKILQKKGTVILPPFSFKFKVLRSYAMNKTWLTGFVMDIFGXX 60
           MWESI+LTV ATAGNNIGKILQKKGT+ILPP SFK KV+R+YA+NKTW  GF+MDIFG  
Sbjct: 1   MWESILLTVAATAGNNIGKILQKKGTIILPPLSFKLKVIRAYALNKTWSIGFLMDIFGAL 60

Query: 61  XXXXXXXXXPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWVGITLAXXXXXXXXXX-X 119
                    PVSVIQPVSGCGLAILSIFSHFYL+EVMN VDWVGITLA            
Sbjct: 61  LMLRALSLAPVSVIQPVSGCGLAILSIFSHFYLQEVMNVVDWVGITLAGFGTIGVGAGGE 120

Query: 120 XXXXXXXLSIFHIPWXXXXXXXXXXXXNGWLRIRKRQRKEQEMMEYDVVEEIIYGLESGI 179
                  LSIFHIPW            NGWLRI KRQR+EQEMMEYDVVEEIIYGLESGI
Sbjct: 121 EQQEMVALSIFHIPWLAFVVSILFILLNGWLRIYKRQRREQEMMEYDVVEEIIYGLESGI 180

Query: 180 LFGMASVISKMGFLFLEQGFPKLLVPLCLIISVCSSGTGFYYQTRGLKHGRAIVVSTCAA 239
           LFGM+SVISKMGFLFLEQGFPK+LVP+CL+ISV  SG GFYYQTRGLKHGRAI+VSTCAA
Sbjct: 181 LFGMSSVISKMGFLFLEQGFPKILVPICLLISVSCSGIGFYYQTRGLKHGRAIIVSTCAA 240

Query: 240 VASILTGVLAGMLALGERLPSAPKARXXXXXXXXXXXXXXXXXXXSTRVVRFLRLNSQRF 299
           VASILTGVLAGMLALGERLPSAPKAR                   STR++RF+   + R 
Sbjct: 241 VASILTGVLAGMLALGERLPSAPKARLALLLGWLLIITGVILLVGSTRLLRFI---TSRQ 297

Query: 300 KRTSVDKNHGPRRSAASRIREPSP-TAVIQAATLNHLLASSSKEKA 344
           KR++++KN+GPRRS  SR+REPSP +AVIQA+TLNHLL+SSSKEKA
Sbjct: 298 KRSNMEKNYGPRRSTTSRVREPSPNSAVIQASTLNHLLSSSSKEKA 343