Miyakogusa Predicted Gene

Lj1g3v1785880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1785880.1 tr|G7J7M2|G7J7M2_MEDTR NADH-ubiquinone
oxidoreductase subunit-like protein OS=Medicago truncatula
GN,99.3,0,NDH1_NuoB,NADH-ubiquinone oxidoreductase, 20 Kd subunit;
NADH-PLASTOQUINONE OXIDOREDUCTASE,NULL; NAD,CUFF.27829.1
         (143 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g104310.1 | NADH:ubiquinone oxidoreductase protein | HC | ...   272   7e-74
Medtr4g051225.1 | NAD(P)H-quinone oxidoreductase subunit K | HC ...   140   3e-34
Medtr7g021790.1 | NAD(P)H-quinone oxidoreductase subunit K | HC ...   139   6e-34
Medtr0002s0630.1 | NADH-quinone oxidoreductase protein | LC | sc...   133   4e-32
Medtr7g033745.1 | NAD(P)H-quinone oxidoreductase subunit K | HC ...    87   5e-18

>Medtr3g104310.1 | NADH:ubiquinone oxidoreductase protein | HC |
           chr3:48049840-48045720 | 20130731
          Length = 210

 Score =  272 bits (696), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 128/143 (89%), Positives = 129/143 (90%)

Query: 1   MNWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKM 60
           MNWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKM
Sbjct: 68  MNWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKM 127

Query: 61  APALRKVYDQMPEPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEAL 120
           APALRKVYDQMPEPRWV+SMGSCAN              CDRIVPVDIYVPGCPPTAEAL
Sbjct: 128 APALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEAL 187

Query: 121 LYGLLQLQKKINRRKDFLHWWTQ 143
           LYGLLQLQKKINRRKDFLHWWTQ
Sbjct: 188 LYGLLQLQKKINRRKDFLHWWTQ 210


>Medtr4g051225.1 | NAD(P)H-quinone oxidoreductase subunit K | HC |
           chr4:18185727-18185044 | 20130731
          Length = 227

 Score =  140 bits (354), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 58/134 (43%), Positives = 93/134 (69%), Gaps = 1/134 (0%)

Query: 2   NWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMA 61
           NW+R  S+WP+ +G +CC +E      +R+D DR+G++ R SPRQ+D +++AGT+T KMA
Sbjct: 27  NWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILIAGTVTMKMA 86

Query: 62  PALRKVYDQMPEPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEAL 120
           P+L ++Y+QMPEP++VI+MG+C                  D+++PVD+Y+PGCPP  EA+
Sbjct: 87  PSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAV 146

Query: 121 LYGLLQLQKKINRR 134
           +  + +L+KKI+R 
Sbjct: 147 IDAITKLRKKISRE 160


>Medtr7g021790.1 | NAD(P)H-quinone oxidoreductase subunit K | HC |
           chr7:6952102-6953045 | 20130731
          Length = 227

 Score =  139 bits (351), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 58/134 (43%), Positives = 92/134 (68%), Gaps = 1/134 (0%)

Query: 2   NWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMA 61
           NW+R  S+WP+ +G +CC +E      +R+D DR+G++ R SPRQ+D ++ AGT+T KMA
Sbjct: 27  NWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMA 86

Query: 62  PALRKVYDQMPEPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEAL 120
           P+L ++Y+QMPEP++VI+MG+C                  D+++PVD+Y+PGCPP  EA+
Sbjct: 87  PSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAV 146

Query: 121 LYGLLQLQKKINRR 134
           +  + +L+KKI+R 
Sbjct: 147 IDAITKLRKKISRE 160


>Medtr0002s0630.1 | NADH-quinone oxidoreductase protein | LC |
           scaffold0002:249715-248456 | 20130731
          Length = 318

 Score =  133 bits (335), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 56/132 (42%), Positives = 89/132 (67%), Gaps = 1/132 (0%)

Query: 2   NWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMA 61
           NW+R  S+WP+ +G +CC +E      +R+D DR+G++ R SPRQ+D ++ AGT+T KMA
Sbjct: 27  NWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMA 86

Query: 62  PALRKVYDQMPEPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEAL 120
           P+L ++Y+QMPEP++VI+MG+C                  D+++PVD+Y+PGCPP  EA+
Sbjct: 87  PSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAV 146

Query: 121 LYGLLQLQKKIN 132
           +  L +LQ ++ 
Sbjct: 147 IDALTKLQGEMK 158


>Medtr7g033745.1 | NAD(P)H-quinone oxidoreductase subunit K | HC |
           chr7:12332373-12332020 | 20130731
          Length = 117

 Score = 87.0 bits (214), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 55/76 (72%), Gaps = 1/76 (1%)

Query: 2   NWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMA 61
           NW+R  S+WP+ +G +CC  E      +R+D D +G++ + SPRQ+D ++ AGT+  KMA
Sbjct: 27  NWSRLSSLWPLLYGTSCCFTEFASLIGSRFDFDSYGLVPQSSPRQTDLILTAGTVM-KMA 85

Query: 62  PALRKVYDQMPEPRWV 77
           P+L ++Y+QMPEP++V
Sbjct: 86  PSLVRLYEQMPEPKYV 101