Miyakogusa Predicted Gene

Lj1g3v1785740.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1785740.2 Non Characterized Hit- tr|B6U701|B6U701_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,55.95,2e-18,DUF1639,Protein of unknown function DUF1639;
seg,NULL,CUFF.27915.2
         (297 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g016800.1 | DUF1639 family protein | HC | chr1:4502153-450...   237   1e-62
Medtr7g085680.2 | DUF1639 family protein | HC | chr7:33221101-33...   130   1e-30
Medtr7g085680.1 | DUF1639 family protein | HC | chr7:33221101-33...   130   1e-30
Medtr8g070650.1 | DUF1639 family protein | HC | chr8:29879375-29...   105   4e-23
Medtr6g083920.1 | DUF1639 family protein | HC | chr6:31320902-31...    68   1e-11
Medtr6g008660.1 | DUF1639 family protein | LC | chr6:2374713-237...    60   2e-09
Medtr5g056110.1 | DUF1639 family protein | LC | chr5:23128646-23...    59   4e-09
Medtr4g100570.1 | DUF1639 family protein | HC | chr4:41473710-41...    59   8e-09
Medtr1g110370.1 | DUF1639 family protein | HC | chr1:49807014-49...    56   4e-08
Medtr5g056040.1 | DUF1639 family protein | HC | chr5:23097162-23...    55   7e-08
Medtr8g005205.1 | DUF1639 family protein | HC | chr8:97277-10016...    51   2e-06
Medtr1g110360.1 | DUF1639 family protein | LC | chr1:49799564-49...    49   5e-06

>Medtr1g016800.1 | DUF1639 family protein | HC |
           chr1:4502153-4508539 | 20130731
          Length = 293

 Score =  237 bits (604), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/290 (53%), Positives = 171/290 (58%), Gaps = 31/290 (10%)

Query: 15  GGDGGSLLLRASS-DGMRQSGTTSDLVLQWGNRKRLRCMKVQVKDKDDSTGPXXXXXXXX 73
           GGDG S LL  +S DG RQS +TSDLVLQWGNRKRLRCMKVQVK   DS  P        
Sbjct: 28  GGDGSSSLLLRASSDGFRQS-STSDLVLQWGNRKRLRCMKVQVKQ--DSLNPVQRTTVRV 84

Query: 74  XXXXXXXXNNKEPLNKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNLRQR---PSS 130
                    ++  +                                  P+LRQR   P  
Sbjct: 85  ---------DRRVIRTEKDTSNRFGTSHTDNNIVNGHSHNNQNQSNGYPSLRQRAPSPQQ 135

Query: 131 PPHRILRNSETSSAMRXXXXXXQSNGVVRGIASPDRGGAHDKRGTXXXXXXXXXX--KPA 188
           PP RILRN+E S AMR      Q+NG       P+RGG H+KRGT            K A
Sbjct: 136 PPPRILRNTEGSGAMRGT----QTNG-------PERGG-HEKRGTHTHHNEHNNNNNKSA 183

Query: 189 ASSDTAHDXXXXXXXXXXX-DAAPPVWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRA 247
           ASSD A D            DA P VWPPKFVIALTNKEKEEDF+AIKGSKLPQRPKKRA
Sbjct: 184 ASSDNALDGKKGGGSSSGSGDATPAVWPPKFVIALTNKEKEEDFMAIKGSKLPQRPKKRA 243

Query: 248 KFVQRTLNLVSPGAWLCDLTLERYEVREKKVTKKRPRGLKAMGNMESESE 297
           K +QRTLNLVSPG WL DLTLERYEVREKK+TKKRPRGLKAMGNM+S+SE
Sbjct: 244 KLIQRTLNLVSPGTWLSDLTLERYEVREKKITKKRPRGLKAMGNMDSDSE 293


>Medtr7g085680.2 | DUF1639 family protein | HC |
           chr7:33221101-33219745 | 20130731
          Length = 217

 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/85 (75%), Positives = 73/85 (85%), Gaps = 1/85 (1%)

Query: 213 VWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYE 272
           VWP K  I L++KEKEEDFLA+KG KLPQRPKKRAK +QR+L LVSPGAWL D+  ERYE
Sbjct: 134 VWP-KLYITLSSKEKEEDFLAMKGCKLPQRPKKRAKIIQRSLLLVSPGAWLTDMCQERYE 192

Query: 273 VREKKVTKKRPRGLKAMGNMESESE 297
           VREKK  KKRPRGLKAMG++ES+SE
Sbjct: 193 VREKKSNKKRPRGLKAMGSVESDSE 217


>Medtr7g085680.1 | DUF1639 family protein | HC |
           chr7:33221101-33219745 | 20130731
          Length = 217

 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/85 (75%), Positives = 73/85 (85%), Gaps = 1/85 (1%)

Query: 213 VWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYE 272
           VWP K  I L++KEKEEDFLA+KG KLPQRPKKRAK +QR+L LVSPGAWL D+  ERYE
Sbjct: 134 VWP-KLYITLSSKEKEEDFLAMKGCKLPQRPKKRAKIIQRSLLLVSPGAWLTDMCQERYE 192

Query: 273 VREKKVTKKRPRGLKAMGNMESESE 297
           VREKK  KKRPRGLKAMG++ES+SE
Sbjct: 193 VREKKSNKKRPRGLKAMGSVESDSE 217


>Medtr8g070650.1 | DUF1639 family protein | HC |
           chr8:29879375-29881709 | 20130731
          Length = 253

 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)

Query: 216 PKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYEVRE 275
           PK  IAL+ KEKE+DFLA+KG+K+PQRPKKRAK + +TL    PG WL DL+  RYEVRE
Sbjct: 170 PKIYIALSRKEKEDDFLAMKGTKIPQRPKKRAKNIDKTLQYCFPGMWLSDLSKSRYEVRE 229

Query: 276 KKVTK--KRPRGLKAMGNMESESE 297
           KK  K  KR RGLK M ++ES+SE
Sbjct: 230 KKSVKKQKRCRGLKGMESLESDSE 253


>Medtr6g083920.1 | DUF1639 family protein | HC |
           chr6:31320902-31323614 | 20130731
          Length = 230

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 44/59 (74%)

Query: 217 KFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYEVRE 275
           KF ++L+ +E EEDF A+ G++ P+RPKKR++ VQR LN + PG WL ++T E Y+V E
Sbjct: 169 KFSVSLSKEEVEEDFWALAGTRPPRRPKKRSRIVQRQLNTLLPGMWLSEVTAESYKVSE 227


>Medtr6g008660.1 | DUF1639 family protein | LC |
           chr6:2374713-2373706 | 20130731
          Length = 273

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 40/57 (70%)

Query: 217 KFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYEV 273
           KF ++LT KE EEDF+ + G   P+RPK+R+K VQ+ +N + PG WL ++  + Y+V
Sbjct: 179 KFSLSLTKKEIEEDFIKMTGQMPPRRPKRRSKNVQKKMNALFPGVWLSEVNADSYKV 235


>Medtr5g056110.1 | DUF1639 family protein | LC |
           chr5:23128646-23127822 | 20130731
          Length = 237

 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 40/63 (63%)

Query: 213 VWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYE 272
           V  PKF + L  KE +EDF+ + G +  +RP KR + VQ+ L+ V PG WL D+  E+Y+
Sbjct: 151 VETPKFSLQLLRKEIDEDFMVLTGCRPRKRPTKRPRVVQKELDNVFPGLWLSDVNAEKYK 210

Query: 273 VRE 275
           V +
Sbjct: 211 VHD 213


>Medtr4g100570.1 | DUF1639 family protein | HC |
           chr4:41473710-41470646 | 20130731
          Length = 243

 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 37/57 (64%)

Query: 217 KFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYEV 273
           KF IAL+  E EED   + GS+  +RP+KRAK VQ+ ++ V PG WL  +T + Y V
Sbjct: 180 KFWIALSKDEIEEDIFVMTGSRPNRRPRKRAKNVQKQMDNVFPGLWLVGITADAYRV 236


>Medtr1g110370.1 | DUF1639 family protein | HC |
           chr1:49807014-49808437 | 20130731
          Length = 240

 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 38/57 (66%)

Query: 217 KFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYEV 273
           KF ++L  KE EEDF+ + G K  +RPKKR + VQ+ ++ + PG WL ++  + Y+V
Sbjct: 172 KFSLSLMKKEIEEDFITMTGQKPHRRPKKRPRNVQKQMDTLFPGMWLSEINADSYKV 228


>Medtr5g056040.1 | DUF1639 family protein | HC |
           chr5:23097162-23095751 | 20130731
          Length = 270

 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 37/59 (62%)

Query: 217 KFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYEVRE 275
           KF + L  KE EEDF+A  G    +RP KR + VQR +N + PG WL ++  E YEV++
Sbjct: 186 KFSVQLLTKEIEEDFVAFMGRGPRKRPTKRPRNVQRQINNIFPGLWLREVNEEMYEVQD 244


>Medtr8g005205.1 | DUF1639 family protein | HC | chr8:97277-100165 |
           20130731
          Length = 552

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 39/56 (69%)

Query: 220 IALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYEVRE 275
           + LTN+E E DFL + G K P++P KR+  VQ+++ ++ PG+ L  ++ +RY V++
Sbjct: 491 LTLTNEEIEHDFLLMTGQKPPKKPIKRSTKVQKSVEVLFPGSNLTTVSPKRYAVKD 546


>Medtr1g110360.1 | DUF1639 family protein | LC |
           chr1:49799564-49800486 | 20130731
          Length = 240

 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 6/57 (10%)

Query: 217 KFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYEV 273
           KF ++LT KE EEDF+ + G K P+RPK+  K      N + PGAWL  +  + Y+V
Sbjct: 181 KFSLSLTKKEIEEDFIKMTGQKPPRRPKRGPK------NTLFPGAWLSQVNADSYKV 231