Miyakogusa Predicted Gene

Lj1g3v1780050.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1780050.1 Non Characterized Hit- tr|J3NF66|J3NF66_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB12G2,46.81,0.0000000000003,seg,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL,CUFF.27784.1
         (412 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g091020.1 | anaphase-promoting complex subunit 5 | HC | ch...   696   0.0  

>Medtr5g091020.1 | anaphase-promoting complex subunit 5 | HC |
           chr5:39660837-39673775 | 20130731
          Length = 922

 Score =  696 bits (1797), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/412 (84%), Positives = 363/412 (88%)

Query: 1   MKLSTCPVNVCKELRLSSHLISDFSSESSAMTIDGAFSTAWLRNLQKPTGSLVLCQENGS 60
           MKLSTCPVNV KELRLSSHLISDFS+ESSAMTIDGAFSTAWLRNLQKP GS + CQ++GS
Sbjct: 501 MKLSTCPVNVSKELRLSSHLISDFSTESSAMTIDGAFSTAWLRNLQKPNGSNIFCQDSGS 560

Query: 61  GSSSNVSQFCAQPTSIPGSVLQVLGSSCILRATAWELYGSSPLSRINVLVHATCFXXXXX 120
           G+SSN+ QFCAQPTSIPGSVLQVLGSS ILRATAWELYGS+P+SRIN LVHATCF     
Sbjct: 561 GNSSNIPQFCAQPTSIPGSVLQVLGSSYILRATAWELYGSTPMSRINALVHATCFADASS 620

Query: 121 XXXXXLAYVKLIQHLAVFKGYKEAFSALKVAEEKFLFVSKSXXXXXXXXXXXXXXXXRGR 180
                LAYVKLIQHLAVFKGYKEAFSALK+AEEKFL VSKS                 GR
Sbjct: 621 SSDAALAYVKLIQHLAVFKGYKEAFSALKIAEEKFLSVSKSQIILLKLQLLHEHALHGGR 680

Query: 181 LKLAQKLCDELSVLASPVTGVDMELKTEASLRHARTLLAAKQFREAAAVAHSLFCMCYKY 240
           LKLAQKLCDEL  LASPVTGVDME+KTEASLRHARTLLAAKQFREAA+VAHSLFCMCYKY
Sbjct: 681 LKLAQKLCDELGALASPVTGVDMEIKTEASLRHARTLLAAKQFREAASVAHSLFCMCYKY 740

Query: 241 NLQVQNASVLLLLAEIHKKSGNAVLGIPYALASLSFCTSFNLDLLKASATLTLAELWLSL 300
           NLQV NASVLLLLAEIHKKSGNAVLGIPYALASLSFC SFNLDLLKASATLTLAELWLSL
Sbjct: 741 NLQVHNASVLLLLAEIHKKSGNAVLGIPYALASLSFCISFNLDLLKASATLTLAELWLSL 800

Query: 301 GSNHATRALNLVHGAFPMILGHGGLELCSRAYIVEAKCYLCDTNFNIFEDHNIVIDSLRQ 360
           GS+HATRALNLV GAFP+ILGHGGLEL SRAYIVEAKCYLCDTNFN+ ED+N VIDSL+Q
Sbjct: 801 GSSHATRALNLVRGAFPIILGHGGLELRSRAYIVEAKCYLCDTNFNVGEDYNFVIDSLKQ 860

Query: 361 ASEELQLLEFHELAAEAFYLMAMVYDKLGQFEEREEAAASFQKHTLALTNPQ 412
           ASEELQ LEFHELAAEAFYLMAMVYDKLGQ EEREEAA SFQKH LAL N Q
Sbjct: 861 ASEELQPLEFHELAAEAFYLMAMVYDKLGQLEEREEAATSFQKHILALNNLQ 912