Miyakogusa Predicted Gene
- Lj1g3v1756720.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1756720.1 tr|B9GNM5|B9GNM5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_754889 PE=4
SV=1,54.02,2e-18,seg,NULL; GB DEF: CW7 PROTEIN (AT1G59520),NULL;
FAMILY NOT NAMED,NULL; DUF2045,Protein of unknown fu,CUFF.27773.1
(392 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g103350.1 | CW7 protein, putative | HC | chr3:47678305-476... 656 0.0
Medtr3g103350.2 | CW7 protein, putative | HC | chr3:47678314-476... 574 e-164
Medtr3g103350.3 | CW7 protein, putative | HC | chr3:47678314-476... 499 e-141
>Medtr3g103350.1 | CW7 protein, putative | HC |
chr3:47678305-47686095 | 20130731
Length = 394
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/394 (81%), Positives = 338/394 (85%), Gaps = 3/394 (0%)
Query: 2 LLGDGGETPSRYELLSMVKKHSNLIGKTVVEEQDAADVEMDMRFWHDVFDLYFVRGKESR 61
+LGDGGETPSRYELL MVKKHSNLIGKTVVEEQDA DVEMDM+FWHDVFDLYFVRGKESR
Sbjct: 1 MLGDGGETPSRYELLCMVKKHSNLIGKTVVEEQDAPDVEMDMKFWHDVFDLYFVRGKESR 60
Query: 62 GRQDDDLVFFVRKLGS---GSYNDSETVDPYFVRRWAPELSNLVDETSVDVDWRRSFYLN 118
GRQDDDLVFFVRKL S GS ND E+VDPYFVRRWAPELSNLVDETS+DVDWRRSFYLN
Sbjct: 61 GRQDDDLVFFVRKLVSRVSGSNNDPESVDPYFVRRWAPELSNLVDETSIDVDWRRSFYLN 120
Query: 119 LIAHTSFSVTVAICSHQVLQKHQVAQDAPLSPIYKVVKTVYASPSRVNFQLDSKKEVETS 178
LIAHTSFSVTVAICS QVLQ HQ +D LSPIYKVVKTVYASPSRVNFQLDS KEVET+
Sbjct: 121 LIAHTSFSVTVAICSQQVLQNHQAGRDTSLSPIYKVVKTVYASPSRVNFQLDSTKEVETT 180
Query: 179 PAYPDICFAIDDFDSTFDAVVLSEKDHCYCVVLNAHDGAAFPSQKVSNDCSTSDNSSPEV 238
PAYPDICFAIDDFDSTFDAVVL+E+DHCYCVVLNAHDGAAFPS KVSNDCSTSD+SSPEV
Sbjct: 181 PAYPDICFAIDDFDSTFDAVVLTERDHCYCVVLNAHDGAAFPSDKVSNDCSTSDDSSPEV 240
Query: 239 CTSSTKRKDTKLTLFSGFVSYQMVRDAYDAGKSRFGSLLSGGNYPGKTDRIYMRGPGGRG 298
CTSST +KDTKLTLFSGFVSYQMVRDAYDAGKSRFGSLLS G++PGKTDRIYM+GPGGRG
Sbjct: 241 CTSSTTKKDTKLTLFSGFVSYQMVRDAYDAGKSRFGSLLSVGHFPGKTDRIYMKGPGGRG 300
Query: 299 EVEVAVSGVTXXXXXXXXXXXXVISKKGFGLGVIXXXXXXXXXXXXXXXXXXXXXXXXNF 358
EVEVAVSGV V+S KGFGLGVI NF
Sbjct: 301 EVEVAVSGVADQSQQDSGPHSPVVSNKGFGLGVIVRRAATVASVAARHAYAAASSSSSNF 360
Query: 359 DEMIPLKCSLMSISLPWEHIAHDLLFKGAPPVNM 392
DEMIPLKCSLMSISLPWE+IA+DLLFKGAPPVNM
Sbjct: 361 DEMIPLKCSLMSISLPWEYIAYDLLFKGAPPVNM 394
>Medtr3g103350.2 | CW7 protein, putative | HC |
chr3:47678314-47686095 | 20130731
Length = 313
Score = 574 bits (1479), Expect = e-164, Method: Compositional matrix adjust.
Identities = 278/309 (89%), Positives = 291/309 (94%), Gaps = 3/309 (0%)
Query: 2 LLGDGGETPSRYELLSMVKKHSNLIGKTVVEEQDAADVEMDMRFWHDVFDLYFVRGKESR 61
+LGDGGETPSRYELL MVKKHSNLIGKTVVEEQDA DVEMDM+FWHDVFDLYFVRGKESR
Sbjct: 1 MLGDGGETPSRYELLCMVKKHSNLIGKTVVEEQDAPDVEMDMKFWHDVFDLYFVRGKESR 60
Query: 62 GRQDDDLVFFVRKLGS---GSYNDSETVDPYFVRRWAPELSNLVDETSVDVDWRRSFYLN 118
GRQDDDLVFFVRKL S GS ND E+VDPYFVRRWAPELSNLVDETS+DVDWRRSFYLN
Sbjct: 61 GRQDDDLVFFVRKLVSRVSGSNNDPESVDPYFVRRWAPELSNLVDETSIDVDWRRSFYLN 120
Query: 119 LIAHTSFSVTVAICSHQVLQKHQVAQDAPLSPIYKVVKTVYASPSRVNFQLDSKKEVETS 178
LIAHTSFSVTVAICS QVLQ HQ +D LSPIYKVVKTVYASPSRVNFQLDS KEVET+
Sbjct: 121 LIAHTSFSVTVAICSQQVLQNHQAGRDTSLSPIYKVVKTVYASPSRVNFQLDSTKEVETT 180
Query: 179 PAYPDICFAIDDFDSTFDAVVLSEKDHCYCVVLNAHDGAAFPSQKVSNDCSTSDNSSPEV 238
PAYPDICFAIDDFDSTFDAVVL+E+DHCYCVVLNAHDGAAFPS KVSNDCSTSD+SSPEV
Sbjct: 181 PAYPDICFAIDDFDSTFDAVVLTERDHCYCVVLNAHDGAAFPSDKVSNDCSTSDDSSPEV 240
Query: 239 CTSSTKRKDTKLTLFSGFVSYQMVRDAYDAGKSRFGSLLSGGNYPGKTDRIYMRGPGGRG 298
CTSST +KDTKLTLFSGFVSYQMVRDAYDAGKSRFGSLLS G++PGKTDRIYM+GPGGRG
Sbjct: 241 CTSSTTKKDTKLTLFSGFVSYQMVRDAYDAGKSRFGSLLSVGHFPGKTDRIYMKGPGGRG 300
Query: 299 EVEVAVSGV 307
EVEVAVSGV
Sbjct: 301 EVEVAVSGV 309
>Medtr3g103350.3 | CW7 protein, putative | HC |
chr3:47678314-47683899 | 20130731
Length = 284
Score = 499 bits (1286), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/270 (89%), Positives = 252/270 (93%), Gaps = 3/270 (1%)
Query: 2 LLGDGGETPSRYELLSMVKKHSNLIGKTVVEEQDAADVEMDMRFWHDVFDLYFVRGKESR 61
+LGDGGETPSRYELL MVKKHSNLIGKTVVEEQDA DVEMDM+FWHDVFDLYFVRGKESR
Sbjct: 1 MLGDGGETPSRYELLCMVKKHSNLIGKTVVEEQDAPDVEMDMKFWHDVFDLYFVRGKESR 60
Query: 62 GRQDDDLVFFVRKLGS---GSYNDSETVDPYFVRRWAPELSNLVDETSVDVDWRRSFYLN 118
GRQDDDLVFFVRKL S GS ND E+VDPYFVRRWAPELSNLVDETS+DVDWRRSFYLN
Sbjct: 61 GRQDDDLVFFVRKLVSRVSGSNNDPESVDPYFVRRWAPELSNLVDETSIDVDWRRSFYLN 120
Query: 119 LIAHTSFSVTVAICSHQVLQKHQVAQDAPLSPIYKVVKTVYASPSRVNFQLDSKKEVETS 178
LIAHTSFSVTVAICS QVLQ HQ +D LSPIYKVVKTVYASPSRVNFQLDS KEVET+
Sbjct: 121 LIAHTSFSVTVAICSQQVLQNHQAGRDTSLSPIYKVVKTVYASPSRVNFQLDSTKEVETT 180
Query: 179 PAYPDICFAIDDFDSTFDAVVLSEKDHCYCVVLNAHDGAAFPSQKVSNDCSTSDNSSPEV 238
PAYPDICFAIDDFDSTFDAVVL+E+DHCYCVVLNAHDGAAFPS KVSNDCSTSD+SSPEV
Sbjct: 181 PAYPDICFAIDDFDSTFDAVVLTERDHCYCVVLNAHDGAAFPSDKVSNDCSTSDDSSPEV 240
Query: 239 CTSSTKRKDTKLTLFSGFVSYQMVRDAYDA 268
CTSST +KDTKLTLFSGFVSYQMVRDAYD
Sbjct: 241 CTSSTTKKDTKLTLFSGFVSYQMVRDAYDG 270