Miyakogusa Predicted Gene

Lj1g3v1755650.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1755650.1 tr|A8HQX6|A8HQX6_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_146614 PE=4
SV=1,31.92,0.0000000000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.27762.1
         (348 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g103320.1 | phloem A10-like protein | HC | chr3:47656882-4...   432   e-121
Medtr5g015150.1 | phloem A10-like protein | HC | chr5:5212723-52...   274   7e-74

>Medtr3g103320.1 | phloem A10-like protein | HC |
           chr3:47656882-47658609 | 20130731
          Length = 397

 Score =  432 bits (1110), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 223/355 (62%), Positives = 271/355 (76%), Gaps = 21/355 (5%)

Query: 1   MVSNSADTVSLLSHDLNHFLTSDSDEIPNSLKQLSKIAASKEFLETLSRVSESVTLGIVL 60
           + SNSA+TVS++S+DLN FL SDSDEIPNSLKQLSKIA S EF  T+SRVS+S+T GI++
Sbjct: 57  LASNSAETVSIVSNDLNKFLKSDSDEIPNSLKQLSKIAMSDEFSITISRVSKSLTQGILM 116

Query: 61  GC---KSQFNSSGEGSSFSDKVAEKLMSKAGTXXXXXXXXXXARNFVLAFFSDADSVGVR 117
           G    +       E S+FSD+V +KL S+AGT          ARN VL F S  ++V   
Sbjct: 117 GYGEFEKPLEIGAEKSNFSDRVLDKLTSEAGTGFVSVVVGSFARNLVLGFRSKLENVDSG 176

Query: 118 SNSDDVPRWVRVICDERCGKLIGDCVRTFVSTAVAVFLDKTMDVNTYDDLFAGLSNPKHH 177
           S SD V  +V VICDE+CGK+IGDCV+TFV+TAVAVFLDKTMDVNTYD++FAG++NPKHH
Sbjct: 177 SKSDGVSGFVSVICDEKCGKVIGDCVQTFVATAVAVFLDKTMDVNTYDEIFAGMTNPKHH 236

Query: 178 DKVKGILVSVCNGAVESFVRTSHQVLTNPXXXXXXXXXXXXXVVGKIDGPGLIEDGCLKP 237
           +KVKGILVS+CNGAVE+ V+TSHQVLTNP               GK D     E+G LKP
Sbjct: 237 EKVKGILVSLCNGAVETLVKTSHQVLTNPK--------------GKSDLSSPRENGLLKP 282

Query: 238 EALLQQLR----VSGVGDSGWIEQIRSALSVPANRRFVIDVTGRVTLETVRSFVEFLLWR 293
           EA LQ+ R    V GVGDSGW+EQ++S LSVPAN+RFV DVTGRVT ET RSFVEF+LWR
Sbjct: 283 EAYLQKFRNGGSVDGVGDSGWLEQVKSTLSVPANQRFVFDVTGRVTFETARSFVEFMLWR 342

Query: 294 MSDGLKSTLSKVREEVVDRGHEVVRYVGAKSSVILTLCLALYLHILGGSRIIMPA 348
           +S+GLK  ++KV ++VVD+G +VVRYVGAKSSVI+TLCLALYLHILGGSRI++ A
Sbjct: 343 ISEGLKRGVNKVHDDVVDKGMQVVRYVGAKSSVIITLCLALYLHILGGSRILVAA 397


>Medtr5g015150.1 | phloem A10-like protein | HC |
           chr5:5212723-5211099 | 20130731
          Length = 413

 Score =  274 bits (701), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 154/369 (41%), Positives = 229/369 (62%), Gaps = 40/369 (10%)

Query: 2   VSNSADTVSLLSHDLNHFLTSDSDEIPNSLKQLSKIAASKEFLETLSRVSESVTLGIVLG 61
           VS SADT+ +++ D+ +FL SDSD +PNSL Q++K++ SK+F ++L  V+ +VT+G+V G
Sbjct: 63  VSESADTIGIVTKDVKNFLQSDSDHVPNSLNQIAKLSRSKQFSDSLVSVTRAVTVGVVNG 122

Query: 62  CKS--QFNSSGEGSSFSDKVAEKLMSKAGTXXXXXXXXXXARNFVLAFFSDADSVGVR-- 117
            +S  + + +  GS+ +D+V +KL + AG+          ARN VL F+SDA   GV+  
Sbjct: 123 YQSMNRVDENQSGSNVADQVFDKLFTPAGSGFASVVVGSFARNIVLGFYSDA---GVKFS 179

Query: 118 --------------SNSDDVPRWVRVICDERCGKLIGDCVRTFVSTAVAVFLDKTMDVNT 163
                         SN+  VP+WV V+C ++CG+LIG+ V+ FVST VAV+LDKTM +NT
Sbjct: 180 GGSDSSSGESGCSDSNAPGVPKWVDVVCSDKCGELIGNFVQLFVSTLVAVYLDKTMHINT 239

Query: 164 YDDLFAGLSNPKHHDKVKGILVSVCNGAVESFVRTSHQVL--TNPXXXXXXXXXXXXXVV 221
           YD+ F+GL+NPKH  +V+ +LV VCNGA+ES V+TSH+V   +NP               
Sbjct: 240 YDEFFSGLTNPKHETRVREMLVDVCNGAIESLVKTSHEVFNTSNPNDSSGSGSYFDA--- 296

Query: 222 GKIDGPGL--IEDGCLKPEALLQQLRVSGVGDSGWIEQIRSALSVPANRRFVIDVTGRVT 279
               G  L  +E  C++ E  +      G    GW+ ++ S L++P+NRR V+DVTGRVT
Sbjct: 297 ----GETLSSVETSCVESERDVCDEEDKG----GWVSKVSSTLAIPSNRRLVLDVTGRVT 348

Query: 280 LETVRSFVEFLLWRMSDGLKSTLSKVREEVVDRGHEVVRYVGAKSSVILTLCLALYLHIL 339
            ETVRSF+EF+L  +   ++     V +EVV    E++RY  AK SVI+ +CL L LHI+
Sbjct: 349 FETVRSFMEFILQTLCGSVRRCAHNVHKEVV----EIMRYAAAKFSVIVAICLVLCLHIM 404

Query: 340 GGSRIIMPA 348
             +  ++PA
Sbjct: 405 DCNWALVPA 413