Miyakogusa Predicted Gene
- Lj1g3v1721260.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1721260.1 tr|Q5XLI2|Q5XLI2_9POAL D-type cyclin OS=Saccharum
hybrid cultivar ROC16 GN=CycD4.1 PE=2 SV=1,45.54,4e-19,CYCLIN-D,NULL;
CYCLINE,NULL; Cyclin_N,Cyclin, N-terminal; Cyclin_C,Cyclin,
C-terminal; no descriptio,gene.g31859.t1.1
(226 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g103080.1 | carboxy-terminal domain cyclin | HC | chr3:474... 239 1e-63
Medtr5g015670.1 | carboxy-terminal domain cyclin | HC | chr5:546... 162 2e-40
Medtr4g095790.1 | amine-terminal domain cyclin | HC | chr4:39947... 115 3e-26
Medtr4g080990.1 | carboxy-terminal domain cyclin | HC | chr4:312... 102 2e-22
Medtr3g100710.2 | carboxy-terminal domain cyclin | HC | chr3:463... 98 5e-21
Medtr5g032550.1 | carboxy-terminal domain cyclin | HC | chr5:139... 96 2e-20
Medtr5g032550.2 | carboxy-terminal domain cyclin | HC | chr5:139... 94 8e-20
Medtr3g100710.1 | carboxy-terminal domain cyclin | HC | chr3:463... 93 3e-19
Medtr5g035360.1 | carboxy-terminal domain cyclin | HC | chr5:153... 91 7e-19
Medtr8g063120.1 | carboxy-terminal domain cyclin | HC | chr8:264... 89 2e-18
Medtr2g011500.1 | carboxy-terminal domain cyclin | HC | chr2:280... 87 9e-18
Medtr8g063120.2 | carboxy-terminal domain cyclin | HC | chr8:264... 86 3e-17
Medtr8g068950.1 | carboxy-terminal domain cyclin | LC | chr8:288... 79 3e-15
Medtr4g094942.1 | carboxy-terminal domain cyclin | HC | chr4:393... 79 4e-15
Medtr1g107535.1 | carboxy-terminal domain cyclin | HC | chr1:488... 78 7e-15
Medtr5g065830.1 | carboxy-terminal domain cyclin | LC | chr5:277... 76 3e-14
Medtr2g089490.1 | carboxy-terminal domain cyclin | HC | chr2:378... 74 1e-13
Medtr3g102310.1 | carboxy-terminal domain cyclin | HC | chr3:471... 71 7e-13
Medtr2g089490.2 | carboxy-terminal domain cyclin | HC | chr2:378... 69 3e-12
Medtr8g074000.1 | carboxy-terminal domain cyclin | HC | chr8:312... 52 5e-07
Medtr3g088405.1 | carboxy-terminal domain cyclin | HC | chr3:401... 49 4e-06
Medtr7g089080.1 | cyclin | HC | chr7:34806771-34800306 | 20130731 49 4e-06
>Medtr3g103080.1 | carboxy-terminal domain cyclin | HC |
chr3:47495355-47493059 | 20130731
Length = 320
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/257 (56%), Positives = 172/257 (66%), Gaps = 37/257 (14%)
Query: 1 MDAINWILKSEN----------------------------KFWAIRLLSIACLSLAAKME 32
++AINWILK K WA+RLLSIACLSLAAKME
Sbjct: 68 LNAINWILKKREALDFHFETAYLSVTYLDRFLSKHFIDGEKDWAMRLLSIACLSLAAKME 127
Query: 33 ECNVPGLSEFHWED-YSFQGKVIQNMELLVLTTLEWNMDIVTPFAFLHYFVTKLCSESPP 91
ECNVP LS+F ED Y F+GKVIQ MEL VL++L+WNM I+TPF+FL YF+ K +ESP
Sbjct: 128 ECNVPELSQFQLEDDYVFEGKVIQKMELFVLSSLDWNMGIITPFSFLSYFIKKFSNESP- 186
Query: 92 SPIFSKTIQ-LIVATMKEVNLMDHKPSVIAAAATLVALDQKLTIEAVKLKMSSIPQLQLI 150
SPI S T+ + M+E NLMDHKPSV+AAAATLVA DQKLTIE V+LKM+SI Q L+
Sbjct: 187 SPIISNTMHPIFTVVMEEFNLMDHKPSVVAAAATLVAFDQKLTIEDVRLKMNSISQHPLL 246
Query: 151 EPNDVFGCYILIQRLYEEEKTRGD-KLLHTPNSSPFRSRPIDMTESSQATSSKRRRLTF- 208
+P+DVF CY LIQRLYEE+ R + K L TPNSS RSRPID +KRRRL+F
Sbjct: 247 QPDDVFACYSLIQRLYEEKIKREEHKHLCTPNSSVIRSRPIDYA----VAMTKRRRLSFI 302
Query: 209 DDEQSHDGKGLDQESPK 225
DDE D KG QE+PK
Sbjct: 303 DDEDGGDKKGPHQENPK 319
>Medtr5g015670.1 | carboxy-terminal domain cyclin | HC |
chr5:5464504-5462357 | 20130731
Length = 353
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 135/218 (61%), Gaps = 14/218 (6%)
Query: 11 ENKFWAIRLLSIACLSLAAKMEECNVPGLSEFHWEDYSFQGKVIQNMELLVLTTLEWNMD 70
E+K WAI+LLS+ACLS+AAKMEE +VP LSE+ E Y F+ KVI+NMELL+L+TLEW M
Sbjct: 142 ESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIE-YRFENKVIKNMELLILSTLEWKMG 200
Query: 71 IVTPFAFLHYFVTKLCSESPPSPIFSKTIQLIVATMKEVNLMDHKPSVIAAAATLVALDQ 130
+ TPFA+LHYF TK C+ S I +K Q IV +K+ NLM+ +PS IA+A+ L A D
Sbjct: 201 LPTPFAYLHYFFTKFCNGSRSETIITKATQHIVTMVKDFNLMNQRPSTIASASILAAFDS 260
Query: 131 KLTIEAVKLKMSSIPQLQLIEPNDVFGCYILIQRLYEEEKTRGDKLLHTPN----SSPFR 186
LT + + L++S + +E VF CY +IQ EK R DK+ TP+ S+
Sbjct: 261 TLTKKEIDLRISLVSSCGNLESEHVFSCYNVIQ-----EKIR-DKVNKTPSSDLLSTESN 314
Query: 187 SRPIDMTESSQATSSKRRRLTFDDEQSHD---GKGLDQ 221
S + + A +R+L++++ D G+ L Q
Sbjct: 315 STCVVVENKFNACVGVKRKLSYEEMNIEDFPPGQKLRQ 352
>Medtr4g095790.1 | amine-terminal domain cyclin | HC |
chr4:39947133-39948589 | 20130731
Length = 320
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 12/204 (5%)
Query: 17 IRLLSIACLSLAAKMEECN-----VPGLSEFHWEDYSFQGKVIQNMELLVLTTLEWNMDI 71
I+LL ACLSLAAKM E + ++E E + I+ ME+ V +TLEW +
Sbjct: 113 IQLLYAACLSLAAKMTEERDLSLLLKCITEIDQEGGFIVKQCIRQMEVEVFSTLEWELTT 172
Query: 72 VTPFAFLHYFVTKLCSESPPSPIFSKTIQLIVATMKEVNLMDHKPSVIAAAATL-VALDQ 130
VTPF FLHYFV C ES P+ S+ ++ ++ +K+VNLMD +PSVIA AATL V D
Sbjct: 173 VTPFDFLHYFVYLFCPESSSEPLISQAVEHVLDILKDVNLMDLRPSVIALAATLMVTFDA 232
Query: 131 KLTIEAVKLKMSSIPQLQL-IEPNDVFGCYILIQRLYEEEKTRGDKLLHTPNSSPFRSRP 189
LT E + L + I LQL ++ VF CY L++ E+ K +G KL + ++ +
Sbjct: 233 TLTREIMDLHIGDIL-LQLNLDTEGVFYCYHLMK---EKSKEKG-KLNTSVSTLTSQWSY 287
Query: 190 IDMTESSQATSSKRRRLTFDDEQS 213
+ + S ++S RR+ FD++++
Sbjct: 288 TSVLDHSVSSSIARRKFGFDNKEN 311
>Medtr4g080990.1 | carboxy-terminal domain cyclin | HC |
chr4:31294716-31295744 | 20130731
Length = 342
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 120/210 (57%), Gaps = 19/210 (9%)
Query: 11 ENKFWAIRLLSIACLSLAAKMEECNVPGLSEFHWED--YSFQGKVIQNMELLVLTTLEWN 68
E + W+++LL++ACLSLAAK++E +VP + E + + F+ K IQ +ELLVLTTL+W
Sbjct: 131 ERRDWSMQLLAVACLSLAAKVDETDVPRILELQIGESKFVFEAKTIQKIELLVLTTLKWR 190
Query: 69 MDIVTPFAFLHYFVTKLCSE--SPPSPIFSKTIQLIVATMKEVNLMDHKPSVIAAAATLV 126
M +TPF+F+ YF++K+ + S + I + QLI +T+K + ++ KPS IAAA
Sbjct: 191 MQAITPFSFIEYFLSKINDDKSSLNNSIILQCTQLISSTIKSPDFLEFKPSEIAAAVATY 250
Query: 127 ALDQKLTIEAVKLKMSSIPQLQLIEPNDVFGCYILIQRLY-----EEEKTRGDKLLHTP- 180
+++ I++ K +S++ +Q IE + C +Q + + + +L +P
Sbjct: 251 VVEEFQAIDSSK-SISTL--IQYIEKERLLKCVEKVQEMCIFTAKDSNASSVSSVLQSPM 307
Query: 181 ---NSSPFRSRPIDMTESSQATSSKRRRLT 207
++ FR + D ++ +KRR+L
Sbjct: 308 GMFDTLRFRYKCDD---NNAGVDAKRRKLN 334
>Medtr3g100710.2 | carboxy-terminal domain cyclin | HC |
chr3:46343463-46340451 | 20130731
Length = 333
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 102/168 (60%), Gaps = 8/168 (4%)
Query: 2 DAINWILKSENKFWAIRLLSIACLSLAAKMEECNVPGLSEFHWED--YSFQGKVIQNMEL 59
+ I+WI K + + W ++LL++ACLSLAAK+EE VP + + + F+ K IQ MEL
Sbjct: 99 EVIDWIQK-KGRAWTMQLLAVACLSLAAKVEETAVPQPLDLQIGESKFVFEAKTIQRMEL 157
Query: 60 LVLTTLEWNMDIVTPFAFLHYFVTKLCSESP--PSPIFSKTIQLIVATMKEVNLMDHKPS 117
LVL+TL+W M +TPF+F+ F++K+ + S S++ QLI +T+K ++ ++ KPS
Sbjct: 158 LVLSTLKWRMQAITPFSFIECFLSKIKDDDKSSLSSSISRSTQLISSTIKGLDFLEFKPS 217
Query: 118 VIAAAATLVALDQKLTIEAVKLKMSSIPQLQLIEPNDVFGCYILIQRL 165
IAAA + + I++ K +S++ +Q +E + C +Q +
Sbjct: 218 EIAAAVATCVVGETQAIDSSK-SISTL--IQYVEKGRLLKCVGKVQEM 262
>Medtr5g032550.1 | carboxy-terminal domain cyclin | HC |
chr5:13982616-13985265 | 20130731
Length = 346
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 91/154 (59%), Gaps = 8/154 (5%)
Query: 15 WAIRLLSIACLSLAAKMEECNVPGLSEFHWED--YSFQGKVIQNMELLVLTTLEWNMDIV 72
W ++LL++AC SLAAKMEE VP + + + FQ K IQ MEL++L++L W M +
Sbjct: 135 WTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRMELMILSSLGWKMRAL 194
Query: 73 TPFAFLHYFVTKL-CSESPPSPIFSKTIQLIVATMKEVNLMDHKPSVIAAAATLVALDQK 131
TP +F+ YF+ K+ C + P + ++++QLI+ +K ++ ++ + S IAAA ++L +
Sbjct: 195 TPCSFIDYFLAKISCEKYPDKSLIARSVQLILNIIKGIDFLEFRSSEIAAAVA-ISLKEL 253
Query: 132 LTIEAVKLKMSSIPQLQLIEPNDVFGCYILIQRL 165
T E K +I +++ V C LI+ L
Sbjct: 254 PTQEVDK----AITDFFIVDKERVLKCVELIRDL 283
>Medtr5g032550.2 | carboxy-terminal domain cyclin | HC |
chr5:13982619-13985265 | 20130731
Length = 272
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Query: 15 WAIRLLSIACLSLAAKMEECNVPGLSEFHWED--YSFQGKVIQNMELLVLTTLEWNMDIV 72
W ++LL++AC SLAAKMEE VP + + + FQ K IQ MEL++L++L W M +
Sbjct: 135 WTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRMELMILSSLGWKMRAL 194
Query: 73 TPFAFLHYFVTKL-CSESPPSPIFSKTIQLIVATMKEVNLMDHKPSVIAAAATL 125
TP +F+ YF+ K+ C + P + ++++QLI+ +K ++ ++ + S IAAA +
Sbjct: 195 TPCSFIDYFLAKISCEKYPDKSLIARSVQLILNIIKGIDFLEFRSSEIAAAVAI 248
>Medtr3g100710.1 | carboxy-terminal domain cyclin | HC |
chr3:46343463-46340451 | 20130731
Length = 362
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 96/159 (60%), Gaps = 7/159 (4%)
Query: 11 ENKFWAIRLLSIACLSLAAKMEECNVPGLSEFHWED--YSFQGKVIQNMELLVLTTLEWN 68
+ + W ++LL++ACLSLAAK+EE VP + + + F+ K IQ MELLVL+TL+W
Sbjct: 136 KGRAWTMQLLAVACLSLAAKVEETAVPQPLDLQIGESKFVFEAKTIQRMELLVLSTLKWR 195
Query: 69 MDIVTPFAFLHYFVTKLCSESP--PSPIFSKTIQLIVATMKEVNLMDHKPSVIAAAATLV 126
M +TPF+F+ F++K+ + S S++ QLI +T+K ++ ++ KPS IAAA
Sbjct: 196 MQAITPFSFIECFLSKIKDDDKSSLSSSISRSTQLISSTIKGLDFLEFKPSEIAAAVATC 255
Query: 127 ALDQKLTIEAVKLKMSSIPQLQLIEPNDVFGCYILIQRL 165
+ + I++ K +S++ +Q +E + C +Q +
Sbjct: 256 VVGETQAIDSSK-SISTL--IQYVEKGRLLKCVGKVQEM 291
>Medtr5g035360.1 | carboxy-terminal domain cyclin | HC |
chr5:15376779-15381259 | 20130731
Length = 334
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 95/173 (54%), Gaps = 28/173 (16%)
Query: 15 WAIRLLSIACLSLAAKMEECNVPGLSEFHWED--YSFQGKVIQNMELLVLTTLEWNMDIV 72
W ++LLS+ACLSLAAKMEE VP L + E Y F+ I+ MELLVL+ L+W + V
Sbjct: 120 WPLQLLSVACLSLAAKMEETLVPSLLDLQVEGVKYMFEPITIRRMELLVLSVLDWRLRSV 179
Query: 73 TPFAFLHYFVTKLCSESPPSP-IFSKTIQLIVATMKEVNLMDHKPSVIAAAATLVALDQK 131
TPF+FL +F KL S S + + S+ Q+I++ ++E +++ + PS IAAAA L A ++
Sbjct: 180 TPFSFLSFFACKLDSTSTFTGFLISRATQIILSKIQEASILAYWPSCIAAAAILYAANE- 238
Query: 132 LTIEAVKLKMSSIPQLQLIEP------------NDVFGCYILIQRLYEEEKTR 172
IP L+EP + GCY L+Q L + R
Sbjct: 239 ------------IPNWSLVEPEHAESWCEGLRKEKIIGCYQLMQELVIDNNQR 279
>Medtr8g063120.1 | carboxy-terminal domain cyclin | HC |
chr8:26438234-26434719 | 20130731
Length = 355
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 93/178 (52%), Gaps = 28/178 (15%)
Query: 11 ENKFWAIRLLSIACLSLAAKMEECNVPGLSEFHWED--YSFQGKVIQNMELLVLTTLEWN 68
E+ W ++LLS+ACLSLAAKMEE VP L +F E Y FQ + I MELLVLT L+W
Sbjct: 133 ESNGWPLQLLSVACLSLAAKMEEPLVPSLLDFQIEGAKYIFQPRTILRMELLVLTILDWR 192
Query: 69 MDIVTPFAFLHYFVTKLCSESPPSP-IFSKTIQLIVATMKEVNLMDHKPSVIAAAATLVA 127
+ +TP +FL +F KL S + I S+ ++I++ +++ + + ++PS IAAAA L A
Sbjct: 193 LRSITPLSFLSFFACKLDSTGTFTHFIISRATEIILSNIQDASFLTYRPSCIAAAAILSA 252
Query: 128 LDQKLTIEAVKLKMSSIPQLQLIEP------------NDVFGCYILIQRLYEEEKTRG 173
++ IP + P + GCY LIQ + R
Sbjct: 253 ANE-------------IPNWSFVNPEHAESWCEGLSKEKIIGCYELIQEIVSSNNQRN 297
>Medtr2g011500.1 | carboxy-terminal domain cyclin | HC |
chr2:2803180-2800861 | 20130731
Length = 306
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 92/159 (57%), Gaps = 4/159 (2%)
Query: 11 ENKFWAIRLLSIACLSLAAKMEECNVPGLSEFHWEDYSFQGKVIQNMELLVLTTLEWNMD 70
+ K W IRL+ I+CLSLA+KM+ ++P S+ E +F G+ IQ MEL++L L+W M
Sbjct: 123 QGKPWLIRLIVISCLSLASKMKNTHLP-FSKLQKEGCNFNGETIQKMELVILGALDWRMR 181
Query: 71 IVTPFAFLHYFVTKLCSESPPSPIFSKTIQLIVATMKEVNLMDHKPSVIAAAATLVALDQ 130
+TPF FL++F++ ++ + + ++I ++ +++KPS + AAA+L+
Sbjct: 182 SITPFPFLNFFIS--LAQIKDRSLKDRAAEIIFNVHNDIKFLEYKPSTV-AAASLIYASY 238
Query: 131 KLTIEAVKLKMSSIPQLQLIEPNDVFGCYILIQRLYEEE 169
+L + + ++I + I+ + + C ++Q ++ E
Sbjct: 239 ELFPQQYYILRATITTSEYIDQDTLAKCIDMMQDIWRNE 277
>Medtr8g063120.2 | carboxy-terminal domain cyclin | HC |
chr8:26438234-26434719 | 20130731
Length = 283
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
Query: 11 ENKFWAIRLLSIACLSLAAKMEECNVPGLSEFHWED--YSFQGKVIQNMELLVLTTLEWN 68
E+ W ++LLS+ACLSLAAKMEE VP L +F E Y FQ + I MELLVLT L+W
Sbjct: 133 ESNGWPLQLLSVACLSLAAKMEEPLVPSLLDFQIEGAKYIFQPRTILRMELLVLTILDWR 192
Query: 69 MDIVTPFAFLHYFVTKLCSESPPSP-IFSKTIQLIVATMKEVNLMDHKPS 117
+ +TP +FL +F KL S + I S+ ++I++ +++ + + ++PS
Sbjct: 193 LRSITPLSFLSFFACKLDSTGTFTHFIISRATEIILSNIQDASFLTYRPS 242
>Medtr8g068950.1 | carboxy-terminal domain cyclin | LC |
chr8:28849604-28851600 | 20130731
Length = 374
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Query: 14 FWAIRLLSIACLSLAAKMEECN-VPGLSEFHWED--YSFQGKVIQNMELLVLTTLEWNMD 70
W+ +LL++ACLS+AAK+EE +P +F + + F+ K I MELL+L L W M
Sbjct: 150 LWSEKLLALACLSIAAKLEEGKKLPKSIDFKLGELVFVFETKGITTMELLILDHLNWEMQ 209
Query: 71 IVTPFAFLHYFVTKLCSES--PPSPIFSKTIQLIVATMKEVNLMDHKPSVIAAAATLVAL 128
TP +F+ YF++K+ SE P +I LI+ K ++ ++ KPS I AAAT + +
Sbjct: 210 SSTPCSFVDYFLSKITSEQQFPSGSSMLNSIDLILKMPKYIDFLEFKPSEI-AAATAICV 268
Query: 129 DQKLTIEAVKLKMSSIPQLQLIEPNDVFGCYILIQRL 165
++L + + + ++E + C L++ L
Sbjct: 269 SKELETNGID---EVLTRFAIVEKDKTLKCLELMKNL 302
>Medtr4g094942.1 | carboxy-terminal domain cyclin | HC |
chr4:39336584-39338672 | 20130731
Length = 359
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 5/159 (3%)
Query: 11 ENKFWAIRLLSIACLSLAAKMEECNVPGLSEFHWED--YSFQGKVIQNMELLVLTTLEWN 68
++K W +L ++ACLSLAAKMEE +VP L +F E+ + F+ K IQ MELLVL+TL+W
Sbjct: 121 KDKPWMTQLTAVACLSLAAKMEETHVPLLLDFQVEESRFVFEAKTIQRMELLVLSTLKWR 180
Query: 69 MDIVTPFAFLHYFVTKLCSESPPSPIFSKTIQ--LIVATMKEVNLMDHKPSVIAAAATLV 126
M VTP +F + V +L +S F + L+ + +M + PS +AAA +
Sbjct: 181 MLPVTPISFFEHIVRRLGLKSRLHWEFMWRCEKVLLHVIVDSRVMMSYLPSTLAAATMIH 240
Query: 127 ALDQKLTIEAVKLKMSSIPQLQLIEPNDVFGCYILIQRL 165
+ + A + + + L I V CY L+ +L
Sbjct: 241 VIKEIEPFNATEY-IEQLLGLLKISEEQVNQCYKLMLKL 278
>Medtr1g107535.1 | carboxy-terminal domain cyclin | HC |
chr1:48851792-48849419 | 20130731
Length = 384
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 15 WAIRLLSIACLSLAAKMEECNVPGLSEFHWED--YSFQGKVIQNMELLVLTTLEWNMDIV 72
W I+L+++ C+SLAAK+EE VP L + +D Y F+ K IQ MELL+L+TL+W M V
Sbjct: 150 WMIQLVAVTCISLAAKVEETQVPLLLDLQVQDTKYVFEAKTIQRMELLILSTLKWKMHPV 209
Query: 73 TPFAFLHYFVTKLCSESPPSPIFSKTIQ-LIVATMKEVNLMDHKPSVIAAAATLVALDQ 130
T +FL + + +L ++ F + + L+++ + + + PSV+A A L +DQ
Sbjct: 210 TTHSFLDHIIRRLGLKTNLHWEFLRRCENLLLSVLLDSRFVGCVPSVLATATMLHVIDQ 268
>Medtr5g065830.1 | carboxy-terminal domain cyclin | LC |
chr5:27701765-27698581 | 20130731
Length = 352
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 88/154 (57%), Gaps = 4/154 (2%)
Query: 15 WAIRLLSIACLSLAAKMEECNVPGLSEFHWED--YSFQGKVIQNMELLVLTTLEWNMDIV 72
W+I+LL+ CL LAAK++E VP + ++ Y F K ++ ELL+L+TL W M +
Sbjct: 131 WSIQLLAFCCLYLAAKIDEVVVPRSVDMQMDEKKYLFDKKTLRTTELLILSTLNWRMQAI 190
Query: 73 TPFAFLHYFVTKLCSESPP-SPIFSKTIQLIVATMKEVNLMDHKPSVIAAAATLVALDQK 131
TPF+++ +F+ K+ + P ++ +LI++T++ ++ + +PS IAAA ++ +
Sbjct: 191 TPFSYIDFFLNKVNGDQVPIGDSILQSFRLIMSTVRGLDFIQFRPSEIAAAVAVLVSVEG 250
Query: 132 LTIEAVKLKMSSIPQLQLIEPNDVFGCYILIQRL 165
+ K S+ ++ +E V C +IQ+L
Sbjct: 251 ENLIVQTEKALSL-LIEYVEKEKVMKCIEMIQQL 283
>Medtr2g089490.1 | carboxy-terminal domain cyclin | HC |
chr2:37834166-37831665 | 20130731
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 15 WAIRLLSIACLSLAAKM-----EECNVPGLSEFHWEDYSFQGKVIQNMELLVLTTLEWNM 69
WA +LL++ C SLA KM +V L + F+ + I+ ME LVL L+W M
Sbjct: 92 WANKLLAVTCFSLAVKMLKTEYSATDVQALMNHGDGGFIFETQTIKRMEALVLGALQWRM 151
Query: 70 DIVTPFAFLHYFVTKLCSESPPSPIF-SKTIQLIVATMKEVNLMDHKPSVIAAAATLVAL 128
+TPF+F+ YF + + + ++I+ + K+V +M+ KPS++AA++ L +
Sbjct: 152 RSITPFSFIPYFTNLFMLDDITLKVLKDRASEIILKSQKDVKVMEFKPSIVAASSLLYSS 211
Query: 129 DQKLTIEAVKLKMSSIPQLQLIEPNDVFGCYILIQRLYEEE 169
+ + + I + V CY +IQ + +EE
Sbjct: 212 HELFPFQ-YPCFLGIISNCSYVNKESVMECYNVIQDIAKEE 251
>Medtr3g102310.1 | carboxy-terminal domain cyclin | HC |
chr3:47150613-47152390 | 20130731
Length = 348
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 17/120 (14%)
Query: 15 WAIRLLSIACLSLAAKMEECNVPGLSEFHWED--YSFQGKVIQNMELLVLTTLEWNMDIV 72
W +L ++ACLSLAAKMEE +VP L + E+ Y F+ K I+ ME+L+L+TL W M+
Sbjct: 128 WMTQLAAVACLSLAAKMEETHVPLLLDLQVEESRYLFEAKTIKKMEILILSTLGWKMNPA 187
Query: 73 TPFAFLHYFVTKL-------CSESPPSPIFSKTIQ--LIVATMKEVNLMDHKPSVIAAAA 123
TP +F+ + + +L C E F K + L+ + M + PSV+A A
Sbjct: 188 TPLSFIDFIIRRLGLKDHLICWE------FLKRCEGVLLSVIRSDSKFMSYLPSVLATAT 241
>Medtr2g089490.2 | carboxy-terminal domain cyclin | HC |
chr2:37834166-37831680 | 20130731
Length = 299
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 15 WAIRLLSIACLSLAAKM-----EECNVPGLSEFHWEDYSFQGKVIQNMELLVLTTLEWNM 69
WA +LL++ C SLA KM +V L + F+ + I+ ME LVL L+W M
Sbjct: 92 WANKLLAVTCFSLAVKMLKTEYSATDVQALMNHGDGGFIFETQTIKRMEALVLGALQWRM 151
Query: 70 DIVTPFAFLHYFVTKLCSESPPSPIF-SKTIQLIVATMKEVNLMDHKPSVIAAAATLVA 127
+TPF+F+ YF + + + ++I+ + K+V +M+ KPS++AA++ L +
Sbjct: 152 RSITPFSFIPYFTNLFMLDDITLKVLKDRASEIILKSQKDVKVMEFKPSIVAASSLLYS 210
>Medtr8g074000.1 | carboxy-terminal domain cyclin | HC |
chr8:31292669-31296642 | 20130731
Length = 434
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 17 IRLLSIACLSLAAKMEECNVPGLSEF-HWEDYSFQGKVIQNMELLVLTTLEWNMDIVTPF 75
++L+ + + LA K EE +VP +S+ H D ++ K I ME +L TL++NM + T +
Sbjct: 251 LQLVGLVAMLLACKYEEVSVPVVSDLIHIADRAYTRKDILEMEKSMLNTLQYNMSLPTAY 310
Query: 76 AFLHYFVTKLCSESPPSPIFSKTIQLIVATMKEVNLMDHK-----PSVIAAAATLVA 127
F+ F+ ++ K ++L+ + E++L++++ PS++AAAA A
Sbjct: 311 VFMRRFLKAAQAD--------KKLELVAFFLVELSLVEYEMLKFPPSLVAAAAVYTA 359
>Medtr3g088405.1 | carboxy-terminal domain cyclin | HC |
chr3:40170176-40175369 | 20130731
Length = 510
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 64/115 (55%), Gaps = 5/115 (4%)
Query: 17 IRLLSIACLSLAAKMEECNVPGLSEFHW-EDYSFQGKVIQNMELLVLTTLEWNMDIVTPF 75
++LL + C+ +AAK EE P + EF + D ++ + + ME VL L++ M T
Sbjct: 319 LQLLGVTCMMIAAKYEEICAPKVEEFCYVTDNTYSKEQVLEMESSVLNFLKFEMTAPTIR 378
Query: 76 AFLHYFVTKLCSESPPSPIFS-KTIQLIVA--TMKEVNLMDHKPSVIAAAATLVA 127
FL F+T + ++ P+ + + VA ++ E +++ + PS+IAA+AT +A
Sbjct: 379 CFLRRFIT-VAQQTCEIPLMQLEYLADYVADLSLLEYDMLKYTPSLIAASATFLA 432
>Medtr7g089080.1 | cyclin | HC | chr7:34806771-34800306 | 20130731
Length = 1318
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 3 AINWILKSENKFWAIRLLSIACLSLAAKMEECNVPGLSEF-HWEDYSFQGKVIQNMELLV 61
A+N + + E ++L+ I+ + +A+K EE P +++F D ++ + I ME +
Sbjct: 264 AVNLVSRRE-----LQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYSHEQILIMEKTI 318
Query: 62 LTTLEWNMDIVTPFAFLHYFVTKLCSESPPSPIFSKTIQLIVATMKEVNLMDHK-----P 116
L LEW + + TPF FL F+ + PS ++++ + E+ +M + P
Sbjct: 319 LGKLEWTLTVPTPFVFLVRFIKAASVSAVPSD--QGDLEMMAHFLSELGMMHYATLRYCP 376
Query: 117 SVIAAAATLVA 127
S++AA+A A
Sbjct: 377 SMLAASAVYAA 387