Miyakogusa Predicted Gene
- Lj1g3v1720090.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1720090.3 Non Characterized Hit- tr|I3SUF5|I3SUF5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,82.35,2e-18,Histidine-containing phosphotransfer domain, HPT
domain,Signal transduction histidine kinase, phosph,CUFF.27722.3
(88 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g089130.1 | histidine phosphotransfer protein | HC | chr1:... 80 3e-16
Medtr2g020770.2 | histidine phosphotransfer protein | HC | chr2:... 75 2e-14
Medtr2g020770.1 | histidine phosphotransfer protein | HC | chr2:... 75 2e-14
Medtr1g082290.1 | histidine phosphotransfer protein | HC | chr1:... 67 4e-12
Medtr7g114020.1 | histidine phosphotransfer protein | HC | chr7:... 63 8e-11
Medtr7g114020.2 | histidine phosphotransfer protein | HC | chr7:... 63 8e-11
Medtr2g103870.1 | histidine phosphotransfer protein | HC | chr2:... 50 6e-07
Medtr4g010160.1 | histidine phosphotransfer protein | HC | chr4:... 47 4e-06
Medtr2g100900.1 | histidine phosphotransfer protein | HC | chr2:... 47 4e-06
Medtr2g100880.1 | histidine phosphotransfer protein | HC | chr2:... 47 5e-06
>Medtr1g089130.1 | histidine phosphotransfer protein | HC |
chr1:40099179-40095805 | 20130731
Length = 149
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 40/51 (78%)
Query: 13 EQVLVDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGCAWC 63
EQV V+FKQ+DAH HQ +GSSASVG ARVKN+C FR CE QNLEGC C
Sbjct: 63 EQVPVNFKQIDAHAHQQKGSSASVGAARVKNVCGTFRNFCEAQNLEGCVRC 113
>Medtr2g020770.2 | histidine phosphotransfer protein | HC |
chr2:6971467-6968958 | 20130731
Length = 144
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 3 ICKELFTWRREQVLVDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGCAW 62
I K+L ++ +Q +DFK+VDAHVHQ++GSSAS+G RVKN C+ FR CE QN++ C
Sbjct: 56 ILKDL-SFAVDQQSIDFKKVDAHVHQFKGSSASIGAQRVKNSCVAFRNFCEEQNIDACRR 114
Query: 63 C 63
C
Sbjct: 115 C 115
>Medtr2g020770.1 | histidine phosphotransfer protein | HC |
chr2:6971467-6968954 | 20130731
Length = 153
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 3 ICKELFTWRREQVLVDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGCAW 62
I K+L ++ +Q +DFK+VDAHVHQ++GSSAS+G RVKN C+ FR CE QN++ C
Sbjct: 56 ILKDL-SFAVDQQSIDFKKVDAHVHQFKGSSASIGAQRVKNSCVAFRNFCEEQNIDACRR 114
Query: 63 C 63
C
Sbjct: 115 C 115
>Medtr1g082290.1 | histidine phosphotransfer protein | HC |
chr1:36582989-36581199 | 20130731
Length = 152
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 3 ICKELFTWRREQVLVDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGC 60
+ KEL T Q +DFK++DAHVHQ +GSS+S+G RV+ CI FR C QN+EGC
Sbjct: 57 LLKEL-TTSLSQEKIDFKRMDAHVHQLKGSSSSIGAQRVQKACISFRDFCTEQNVEGC 113
>Medtr7g114020.1 | histidine phosphotransfer protein | HC |
chr7:47026918-47029559 | 20130731
Length = 147
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 17 VDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGC 60
+DFK+VDA VHQ +GSS+S+G RV+ +CI F+ CE +N+EGC
Sbjct: 67 IDFKRVDALVHQLKGSSSSIGAQRVQRVCIAFKNYCEEKNIEGC 110
>Medtr7g114020.2 | histidine phosphotransfer protein | HC |
chr7:47026918-47029678 | 20130731
Length = 147
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 17 VDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGC 60
+DFK+VDA VHQ +GSS+S+G RV+ +CI F+ CE +N+EGC
Sbjct: 67 IDFKRVDALVHQLKGSSSSIGAQRVQRVCIAFKNYCEEKNIEGC 110
>Medtr2g103870.1 | histidine phosphotransfer protein | HC |
chr2:44734362-44732919 | 20130731
Length = 158
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 13 EQVLVDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGC 60
E+ D+K+++ H++Q+ GSS+S+G RV ++CI FR E N GC
Sbjct: 69 EREFSDYKKIEIHLNQFIGSSSSIGAKRVTSICIAFRAASEQDNRAGC 116
>Medtr4g010160.1 | histidine phosphotransfer protein | HC |
chr4:2259711-2261093 | 20130731
Length = 145
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 13 EQVLVDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGC 60
E+ +D+K++ ++Q+ GSS+S+G RV N+C+ FR E N GC
Sbjct: 57 EREFMDYKKLGIDLNQFMGSSSSIGAKRVTNVCVAFRVATEQNNRAGC 104
>Medtr2g100900.1 | histidine phosphotransfer protein | HC |
chr2:43407985-43406861 | 20130731
Length = 150
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 13 EQVLVDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGC 60
E+ +DF ++D +HQ++GSS+S+G +VK R+ C T N EGC
Sbjct: 65 ERSPLDFNKLDTIMHQFKGSSSSIGAKKVKAESTLIREYCRTGNAEGC 112
>Medtr2g100880.1 | histidine phosphotransfer protein | HC |
chr2:43395841-43394459 | 20130731
Length = 150
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 13 EQVLVDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGC 60
E+ +DF ++D +HQ++GSS+S+G +VK R+ C T N EGC
Sbjct: 65 ERSPLDFNKLDTIMHQFKGSSSSIGAKKVKAESTLIREYCRTGNAEGC 112