Miyakogusa Predicted Gene

Lj1g3v1697850.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1697850.1 Non Characterized Hit- tr|J3PC71|J3PC71_GAGT3
Uncharacterized protein OS=Gaeumannomyces graminis
var,33.17,5e-19,MRG,MRG domain; seg,NULL; MORTALITY FACTOR 4-LIKE
PROTEIN,MRG,CUFF.27687.1
         (222 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g102460.1 | chromatin-binding protein | HC | chr3:47218316...   293   9e-80
Medtr3g102460.2 | chromatin-binding protein | HC | chr3:47218371...   292   1e-79
Medtr3g102460.4 | chromatin-binding protein | HC | chr3:47218316...   231   5e-61
Medtr3g102460.3 | chromatin-binding protein | HC | chr3:47218371...   230   8e-61
Medtr4g094988.1 | chromatin-binding protein | HC | chr4:39447669...   186   2e-47

>Medtr3g102460.1 | chromatin-binding protein | HC |
           chr3:47218316-47214003 | 20130731
          Length = 314

 Score =  293 bits (750), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 149/219 (68%), Positives = 167/219 (76%), Gaps = 3/219 (1%)

Query: 1   MSTKQALDEKHGNDKNAKVPRASQAKSKGFNVGRGRKRKNESLAKVKSEVDPDKVFNIQI 60
           M  K ALDEK+GNDKNA+ PR S   SK  NV R RKRKN+SL K K  V PDK+ NIQI
Sbjct: 91  MRIKLALDEKYGNDKNARKPRGS---SKSSNVARSRKRKNDSLVKEKLAVLPDKLVNIQI 147

Query: 61  PPTLKKQLVDDCEFITNLGKLVKLPRTPSVSDIVKNYFDYKLKKCGSIPDSTEEIMKGLC 120
           P TLKKQLVDD EFIT+LGKLVKLPRTP+V+DI K YFDY+LKK GSI DS EEIMKGL 
Sbjct: 148 PLTLKKQLVDDFEFITHLGKLVKLPRTPNVNDIFKTYFDYRLKKSGSIADSVEEIMKGLS 207

Query: 121 FYFDNALPNMLLYKNEREQYKEACPNDILPSTIYGAEHXXXXXXXXXXXXXXXSIESQTL 180
            YFD ALP MLLY NER+QY+EACPNDI+PS IYGAEH               +IE  TL
Sbjct: 208 CYFDKALPVMLLYNNERQQYQEACPNDIVPSAIYGAEHLLRLFVKLPELLFHANIEGDTL 267

Query: 181 KELQAQLLDFLRFLQRNQSKFFLSTYHVQEDTENSTNKQ 219
            ELQAQ+LDFLRFL++NQ  FFLS+YHVQED ENS++KQ
Sbjct: 268 IELQAQVLDFLRFLRKNQRAFFLSSYHVQEDVENSSDKQ 306


>Medtr3g102460.2 | chromatin-binding protein | HC |
           chr3:47218371-47213977 | 20130731
          Length = 277

 Score =  292 bits (748), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 149/219 (68%), Positives = 167/219 (76%), Gaps = 3/219 (1%)

Query: 1   MSTKQALDEKHGNDKNAKVPRASQAKSKGFNVGRGRKRKNESLAKVKSEVDPDKVFNIQI 60
           M  K ALDEK+GNDKNA+ PR S   SK  NV R RKRKN+SL K K  V PDK+ NIQI
Sbjct: 54  MRIKLALDEKYGNDKNARKPRGS---SKSSNVARSRKRKNDSLVKEKLAVLPDKLVNIQI 110

Query: 61  PPTLKKQLVDDCEFITNLGKLVKLPRTPSVSDIVKNYFDYKLKKCGSIPDSTEEIMKGLC 120
           P TLKKQLVDD EFIT+LGKLVKLPRTP+V+DI K YFDY+LKK GSI DS EEIMKGL 
Sbjct: 111 PLTLKKQLVDDFEFITHLGKLVKLPRTPNVNDIFKTYFDYRLKKSGSIADSVEEIMKGLS 170

Query: 121 FYFDNALPNMLLYKNEREQYKEACPNDILPSTIYGAEHXXXXXXXXXXXXXXXSIESQTL 180
            YFD ALP MLLY NER+QY+EACPNDI+PS IYGAEH               +IE  TL
Sbjct: 171 CYFDKALPVMLLYNNERQQYQEACPNDIVPSAIYGAEHLLRLFVKLPELLFHANIEGDTL 230

Query: 181 KELQAQLLDFLRFLQRNQSKFFLSTYHVQEDTENSTNKQ 219
            ELQAQ+LDFLRFL++NQ  FFLS+YHVQED ENS++KQ
Sbjct: 231 IELQAQVLDFLRFLRKNQRAFFLSSYHVQEDVENSSDKQ 269


>Medtr3g102460.4 | chromatin-binding protein | HC |
           chr3:47218316-47214786 | 20130731
          Length = 282

 Score =  231 bits (588), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 116/158 (73%), Positives = 127/158 (80%), Gaps = 3/158 (1%)

Query: 1   MSTKQALDEKHGNDKNAKVPRASQAKSKGFNVGRGRKRKNESLAKVKSEVDPDKVFNIQI 60
           M  K ALDEK+GNDKNA+ PR S   SK  NV R RKRKN+SL K K  V PDK+ NIQI
Sbjct: 91  MRIKLALDEKYGNDKNARKPRGS---SKSSNVARSRKRKNDSLVKEKLAVLPDKLVNIQI 147

Query: 61  PPTLKKQLVDDCEFITNLGKLVKLPRTPSVSDIVKNYFDYKLKKCGSIPDSTEEIMKGLC 120
           P TLKKQLVDD EFIT+LGKLVKLPRTP+V+DI K YFDY+LKK GSI DS EEIMKGL 
Sbjct: 148 PLTLKKQLVDDFEFITHLGKLVKLPRTPNVNDIFKTYFDYRLKKSGSIADSVEEIMKGLS 207

Query: 121 FYFDNALPNMLLYKNEREQYKEACPNDILPSTIYGAEH 158
            YFD ALP MLLY NER+QY+EACPNDI+PS IYGAEH
Sbjct: 208 CYFDKALPVMLLYNNERQQYQEACPNDIVPSAIYGAEH 245


>Medtr3g102460.3 | chromatin-binding protein | HC |
           chr3:47218371-47213972 | 20130731
          Length = 245

 Score =  230 bits (587), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 116/158 (73%), Positives = 127/158 (80%), Gaps = 3/158 (1%)

Query: 1   MSTKQALDEKHGNDKNAKVPRASQAKSKGFNVGRGRKRKNESLAKVKSEVDPDKVFNIQI 60
           M  K ALDEK+GNDKNA+ PR S   SK  NV R RKRKN+SL K K  V PDK+ NIQI
Sbjct: 54  MRIKLALDEKYGNDKNARKPRGS---SKSSNVARSRKRKNDSLVKEKLAVLPDKLVNIQI 110

Query: 61  PPTLKKQLVDDCEFITNLGKLVKLPRTPSVSDIVKNYFDYKLKKCGSIPDSTEEIMKGLC 120
           P TLKKQLVDD EFIT+LGKLVKLPRTP+V+DI K YFDY+LKK GSI DS EEIMKGL 
Sbjct: 111 PLTLKKQLVDDFEFITHLGKLVKLPRTPNVNDIFKTYFDYRLKKSGSIADSVEEIMKGLS 170

Query: 121 FYFDNALPNMLLYKNEREQYKEACPNDILPSTIYGAEH 158
            YFD ALP MLLY NER+QY+EACPNDI+PS IYGAEH
Sbjct: 171 CYFDKALPVMLLYNNERQQYQEACPNDIVPSAIYGAEH 208


>Medtr4g094988.1 | chromatin-binding protein | HC |
           chr4:39447669-39441563 | 20130731
          Length = 319

 Score =  186 bits (471), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/215 (48%), Positives = 136/215 (63%), Gaps = 13/215 (6%)

Query: 4   KQALDEKHGNDKNAKVPRASQAKSKGF-----------NVG-RGRKRKNESLAKVKSEVD 51
           ++ALD+K G DKN K  R++Q K+K             N+  +G+KRK +S  + K   +
Sbjct: 91  QRALDKKQGVDKNVKSGRSAQVKAKSSADAKVEKEDIKNIASKGKKRKIDSGVE-KGSGN 149

Query: 52  PDKVFNIQIPPTLKKQLVDDCEFITNLGKLVKLPRTPSVSDIVKNYFDYKLKKCGSIPDS 111
            +K+F IQIP  LKKQLVDD +F+    KLVKLPR+P+V +I+  Y +YK KK     DS
Sbjct: 150 DEKLFKIQIPAPLKKQLVDDWDFVNQQDKLVKLPRSPTVDEILTKYLEYKSKKDSVEADS 209

Query: 112 TEEIMKGLCFYFDNALPNMLLYKNEREQYKEACPNDILPSTIYGAEHXXXXXXXXXXXXX 171
           T EI+KG+  YFD ALP ML+YK ER+Q  EA  +++ PSTIYGAEH             
Sbjct: 210 TGEILKGIRLYFDKALPMMLVYKKERKQCNEAVVDNVSPSTIYGAEHLLRLFVKLPELLS 269

Query: 172 XXSIESQTLKELQAQLLDFLRFLQRNQSKFFLSTY 206
             +IE +TL  LQ +LLDFLRFLQ+NQS FFLS Y
Sbjct: 270 YVNIEEETLSRLQQKLLDFLRFLQKNQSTFFLSAY 304