Miyakogusa Predicted Gene
- Lj1g3v1697850.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1697850.1 Non Characterized Hit- tr|J3PC71|J3PC71_GAGT3
Uncharacterized protein OS=Gaeumannomyces graminis
var,33.17,5e-19,MRG,MRG domain; seg,NULL; MORTALITY FACTOR 4-LIKE
PROTEIN,MRG,CUFF.27687.1
(222 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g102460.1 | chromatin-binding protein | HC | chr3:47218316... 293 9e-80
Medtr3g102460.2 | chromatin-binding protein | HC | chr3:47218371... 292 1e-79
Medtr3g102460.4 | chromatin-binding protein | HC | chr3:47218316... 231 5e-61
Medtr3g102460.3 | chromatin-binding protein | HC | chr3:47218371... 230 8e-61
Medtr4g094988.1 | chromatin-binding protein | HC | chr4:39447669... 186 2e-47
>Medtr3g102460.1 | chromatin-binding protein | HC |
chr3:47218316-47214003 | 20130731
Length = 314
Score = 293 bits (750), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 149/219 (68%), Positives = 167/219 (76%), Gaps = 3/219 (1%)
Query: 1 MSTKQALDEKHGNDKNAKVPRASQAKSKGFNVGRGRKRKNESLAKVKSEVDPDKVFNIQI 60
M K ALDEK+GNDKNA+ PR S SK NV R RKRKN+SL K K V PDK+ NIQI
Sbjct: 91 MRIKLALDEKYGNDKNARKPRGS---SKSSNVARSRKRKNDSLVKEKLAVLPDKLVNIQI 147
Query: 61 PPTLKKQLVDDCEFITNLGKLVKLPRTPSVSDIVKNYFDYKLKKCGSIPDSTEEIMKGLC 120
P TLKKQLVDD EFIT+LGKLVKLPRTP+V+DI K YFDY+LKK GSI DS EEIMKGL
Sbjct: 148 PLTLKKQLVDDFEFITHLGKLVKLPRTPNVNDIFKTYFDYRLKKSGSIADSVEEIMKGLS 207
Query: 121 FYFDNALPNMLLYKNEREQYKEACPNDILPSTIYGAEHXXXXXXXXXXXXXXXSIESQTL 180
YFD ALP MLLY NER+QY+EACPNDI+PS IYGAEH +IE TL
Sbjct: 208 CYFDKALPVMLLYNNERQQYQEACPNDIVPSAIYGAEHLLRLFVKLPELLFHANIEGDTL 267
Query: 181 KELQAQLLDFLRFLQRNQSKFFLSTYHVQEDTENSTNKQ 219
ELQAQ+LDFLRFL++NQ FFLS+YHVQED ENS++KQ
Sbjct: 268 IELQAQVLDFLRFLRKNQRAFFLSSYHVQEDVENSSDKQ 306
>Medtr3g102460.2 | chromatin-binding protein | HC |
chr3:47218371-47213977 | 20130731
Length = 277
Score = 292 bits (748), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/219 (68%), Positives = 167/219 (76%), Gaps = 3/219 (1%)
Query: 1 MSTKQALDEKHGNDKNAKVPRASQAKSKGFNVGRGRKRKNESLAKVKSEVDPDKVFNIQI 60
M K ALDEK+GNDKNA+ PR S SK NV R RKRKN+SL K K V PDK+ NIQI
Sbjct: 54 MRIKLALDEKYGNDKNARKPRGS---SKSSNVARSRKRKNDSLVKEKLAVLPDKLVNIQI 110
Query: 61 PPTLKKQLVDDCEFITNLGKLVKLPRTPSVSDIVKNYFDYKLKKCGSIPDSTEEIMKGLC 120
P TLKKQLVDD EFIT+LGKLVKLPRTP+V+DI K YFDY+LKK GSI DS EEIMKGL
Sbjct: 111 PLTLKKQLVDDFEFITHLGKLVKLPRTPNVNDIFKTYFDYRLKKSGSIADSVEEIMKGLS 170
Query: 121 FYFDNALPNMLLYKNEREQYKEACPNDILPSTIYGAEHXXXXXXXXXXXXXXXSIESQTL 180
YFD ALP MLLY NER+QY+EACPNDI+PS IYGAEH +IE TL
Sbjct: 171 CYFDKALPVMLLYNNERQQYQEACPNDIVPSAIYGAEHLLRLFVKLPELLFHANIEGDTL 230
Query: 181 KELQAQLLDFLRFLQRNQSKFFLSTYHVQEDTENSTNKQ 219
ELQAQ+LDFLRFL++NQ FFLS+YHVQED ENS++KQ
Sbjct: 231 IELQAQVLDFLRFLRKNQRAFFLSSYHVQEDVENSSDKQ 269
>Medtr3g102460.4 | chromatin-binding protein | HC |
chr3:47218316-47214786 | 20130731
Length = 282
Score = 231 bits (588), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 116/158 (73%), Positives = 127/158 (80%), Gaps = 3/158 (1%)
Query: 1 MSTKQALDEKHGNDKNAKVPRASQAKSKGFNVGRGRKRKNESLAKVKSEVDPDKVFNIQI 60
M K ALDEK+GNDKNA+ PR S SK NV R RKRKN+SL K K V PDK+ NIQI
Sbjct: 91 MRIKLALDEKYGNDKNARKPRGS---SKSSNVARSRKRKNDSLVKEKLAVLPDKLVNIQI 147
Query: 61 PPTLKKQLVDDCEFITNLGKLVKLPRTPSVSDIVKNYFDYKLKKCGSIPDSTEEIMKGLC 120
P TLKKQLVDD EFIT+LGKLVKLPRTP+V+DI K YFDY+LKK GSI DS EEIMKGL
Sbjct: 148 PLTLKKQLVDDFEFITHLGKLVKLPRTPNVNDIFKTYFDYRLKKSGSIADSVEEIMKGLS 207
Query: 121 FYFDNALPNMLLYKNEREQYKEACPNDILPSTIYGAEH 158
YFD ALP MLLY NER+QY+EACPNDI+PS IYGAEH
Sbjct: 208 CYFDKALPVMLLYNNERQQYQEACPNDIVPSAIYGAEH 245
>Medtr3g102460.3 | chromatin-binding protein | HC |
chr3:47218371-47213972 | 20130731
Length = 245
Score = 230 bits (587), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/158 (73%), Positives = 127/158 (80%), Gaps = 3/158 (1%)
Query: 1 MSTKQALDEKHGNDKNAKVPRASQAKSKGFNVGRGRKRKNESLAKVKSEVDPDKVFNIQI 60
M K ALDEK+GNDKNA+ PR S SK NV R RKRKN+SL K K V PDK+ NIQI
Sbjct: 54 MRIKLALDEKYGNDKNARKPRGS---SKSSNVARSRKRKNDSLVKEKLAVLPDKLVNIQI 110
Query: 61 PPTLKKQLVDDCEFITNLGKLVKLPRTPSVSDIVKNYFDYKLKKCGSIPDSTEEIMKGLC 120
P TLKKQLVDD EFIT+LGKLVKLPRTP+V+DI K YFDY+LKK GSI DS EEIMKGL
Sbjct: 111 PLTLKKQLVDDFEFITHLGKLVKLPRTPNVNDIFKTYFDYRLKKSGSIADSVEEIMKGLS 170
Query: 121 FYFDNALPNMLLYKNEREQYKEACPNDILPSTIYGAEH 158
YFD ALP MLLY NER+QY+EACPNDI+PS IYGAEH
Sbjct: 171 CYFDKALPVMLLYNNERQQYQEACPNDIVPSAIYGAEH 208
>Medtr4g094988.1 | chromatin-binding protein | HC |
chr4:39447669-39441563 | 20130731
Length = 319
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 136/215 (63%), Gaps = 13/215 (6%)
Query: 4 KQALDEKHGNDKNAKVPRASQAKSKGF-----------NVG-RGRKRKNESLAKVKSEVD 51
++ALD+K G DKN K R++Q K+K N+ +G+KRK +S + K +
Sbjct: 91 QRALDKKQGVDKNVKSGRSAQVKAKSSADAKVEKEDIKNIASKGKKRKIDSGVE-KGSGN 149
Query: 52 PDKVFNIQIPPTLKKQLVDDCEFITNLGKLVKLPRTPSVSDIVKNYFDYKLKKCGSIPDS 111
+K+F IQIP LKKQLVDD +F+ KLVKLPR+P+V +I+ Y +YK KK DS
Sbjct: 150 DEKLFKIQIPAPLKKQLVDDWDFVNQQDKLVKLPRSPTVDEILTKYLEYKSKKDSVEADS 209
Query: 112 TEEIMKGLCFYFDNALPNMLLYKNEREQYKEACPNDILPSTIYGAEHXXXXXXXXXXXXX 171
T EI+KG+ YFD ALP ML+YK ER+Q EA +++ PSTIYGAEH
Sbjct: 210 TGEILKGIRLYFDKALPMMLVYKKERKQCNEAVVDNVSPSTIYGAEHLLRLFVKLPELLS 269
Query: 172 XXSIESQTLKELQAQLLDFLRFLQRNQSKFFLSTY 206
+IE +TL LQ +LLDFLRFLQ+NQS FFLS Y
Sbjct: 270 YVNIEEETLSRLQQKLLDFLRFLQKNQSTFFLSAY 304