Miyakogusa Predicted Gene

Lj1g3v1650280.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1650280.1 tr|G7J6E4|G7J6E4_MEDTR THO complex subunit-like
protein OS=Medicago truncatula GN=MTR_3g101790 PE=4 ,81.41,0,FMS
INTERACTING PROTEIN,NULL; coiled-coil,NULL; FimP,THO complex, subunit
5; seg,NULL,CUFF.27667.1
         (806 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g101790.1 | THO complex, protein | HC | chr3:46887729-4688...  1206   0.0  

>Medtr3g101790.1 | THO complex, protein | HC |
           chr3:46887729-46880341 | 20130731
          Length = 807

 Score = 1206 bits (3120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/807 (76%), Positives = 679/807 (84%), Gaps = 4/807 (0%)

Query: 1   MEDGEIEEGSIPMAEEDEPAFAHSPEQSKP-EESPYEMLLNSKAYVENIIAEILSIKKES 59
           MEDGEIEEGSI M E++E AF +S E SK  EESPYE+L NSK+ +E+II++ILSIKKE+
Sbjct: 1   MEDGEIEEGSIAMEEQNEQAFPNSSEDSKSDEESPYELLQNSKSSIESIISDILSIKKEA 60

Query: 60  KPKSHLRDLVTQMFLHFIILRQANRSILLEEDRVKMETERAKAPVDFTTLQLHNLMYEKT 119
           KPK  LRDLVTQMFLHFI LRQANRSIL+EEDRVKM+TERAKAPVDFTTLQLHNL+YEK+
Sbjct: 61  KPKQLLRDLVTQMFLHFITLRQANRSILIEEDRVKMQTERAKAPVDFTTLQLHNLVYEKS 120

Query: 120 HYLKAIKACKDFKSKYPDIDLVPEEEFFRDAPQDIKDSVMSKDSAHNLMLKRLNFELFQR 179
           HYLKAIKACKDFKSKYPDI+LVPEEEFFRDAP+DIKD V+SKDSAHNLMLKRLNFEL+QR
Sbjct: 121 HYLKAIKACKDFKSKYPDIELVPEEEFFRDAPKDIKDLVLSKDSAHNLMLKRLNFELYQR 180

Query: 180 KELCKLHEKLGQQKKALLETIGNRKKFLTSLPSHLKSLKKASLPVQNQLGLMHTKKLKQH 239
           KELCK H KL  QKK LLETI NRKKFLTSLPSHLKSLKKASLPVQNQLG+ HTKKLKQH
Sbjct: 181 KELCKHHAKLELQKKILLETIANRKKFLTSLPSHLKSLKKASLPVQNQLGITHTKKLKQH 240

Query: 240 QSAELLPPALYVIYSQLLAQKEAFTEPIDVEILGSLKDAQAFARIQAHKDTGISSGNDNS 299
            SAELLPPALYVIYSQLLAQKEAF EPID+EI+GSLKDAQAFAR QA+KDTGIS+  D+S
Sbjct: 241 HSAELLPPALYVIYSQLLAQKEAFAEPIDLEIVGSLKDAQAFARSQANKDTGISTVMDSS 300

Query: 300 KLEDDVPDEEEDGXXXXXXXXXXXXXESPDQGGIFQVHPLKIIIHVHEDETFDAKHAKLI 359
           KLEDDV D+EEDG             ESPDQGGIF+ HPLKIII+V+EDE+ D K AKLI
Sbjct: 301 KLEDDVHDDEEDGQRRRKRPRRVEVKESPDQGGIFKSHPLKIIINVYEDESSDPKPAKLI 360

Query: 360 TLRFEYLVKLNVVCVGTEGSDDGTDNDILCNLFPNDTGLELPHQSAKLFVGDAVTFNAQR 419
           TLRFEY+VKLN VCVG EGS+DG DNDILCNLFPNDTGLELPHQSAKLFV +A+ FN QR
Sbjct: 361 TLRFEYVVKLNTVCVGVEGSNDGPDNDILCNLFPNDTGLELPHQSAKLFVQNAMAFNTQR 420

Query: 420 ASRPYKWAQHLAGIDFLPEVSPLLLNDNSEATKSEDVISGLSLYRQQNRVQTILQRIRSR 479
            SRPYKWAQHLAGIDFLPEVSPLL  DNSEA KSEDV+SGL+LYRQQNRV T+LQRIRSR
Sbjct: 421 TSRPYKWAQHLAGIDFLPEVSPLLPADNSEAAKSEDVVSGLTLYRQQNRVHTVLQRIRSR 480

Query: 480 XXXXXXXXXXXXXXXXXXWPLLSCKSVPWALHTPLCNLDGWSPVRALPVPNEASSMAIIE 539
                             WPLLSCKSVPWALHTPLC LDGWSP+RALPVP+EASS AII+
Sbjct: 481 RKAQLALLEQLESLTKLEWPLLSCKSVPWALHTPLCKLDGWSPIRALPVPSEASSPAIID 540

Query: 540 IEKHTQEPMDVDVIERSGATKEELESLREDGELPTLLPNTSKFDRSKQVSLISKS--PPL 597
            E+H QE  DVDVIE SG TK EL+S+ EDGELPTLLP  +KFD SKQ SLISKS  P L
Sbjct: 541 KEEHVQESTDVDVIENSGVTKGELDSMTEDGELPTLLPKRTKFDHSKQASLISKSIIPSL 600

Query: 598 NKARSQSFKKVDDNSDFLLDTESDFDEPAHIEQEHENISSDYCARKSVSWIDSGVKEFVL 657
           NK RS SFKK DD+SDFLLDT+SDFDEPA +E EHE+  SDYCA KS+SW++SG KEFVL
Sbjct: 601 NKVRSLSFKKGDDSSDFLLDTDSDFDEPAQVESEHEHSVSDYCATKSLSWMESGAKEFVL 660

Query: 658 VLSRKTNAVERNVNLEAKIKVSMEYPLRPPLFALSLCCIPSGEKHDENDGLEWYNELRAM 717
           VLSRKTNA ERNVNLEAKIK+SMEYPLRPPLFALS C  PSGE H ENDGLEWYNELRA+
Sbjct: 661 VLSRKTNADERNVNLEAKIKISMEYPLRPPLFALSFCGRPSGEYHIENDGLEWYNELRAI 720

Query: 718 EAEVNLHILKVLPANEQNYVLAHQVSCLAMLFDYYLDEASPSPERTNCTSVIDVGLCKPV 777
           EAEVNLH+LK LP NE NYVLAHQVSCLAMLFDYYLD+ S S ERTNCT+++DVGLCKPV
Sbjct: 721 EAEVNLHMLKTLPVNEHNYVLAHQVSCLAMLFDYYLDDGS-SSERTNCTTLVDVGLCKPV 779

Query: 778 XXXXXXXXXXXXXXXKMISWKDMKFSS 804
                          K ISWKD KF+S
Sbjct: 780 SGGFLGRSFRGRDHRKTISWKDTKFTS 806