Miyakogusa Predicted Gene

Lj1g3v1605280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1605280.1 Non Characterized Hit- tr|I3S152|I3S152_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,37.69,3e-17,
,CUFF.27569.1
         (367 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g111540.1 | transmembrane protein, putative | HC | chr3:52...   531   e-151
Medtr3g077500.1 | transmembrane protein, putative | HC | chr3:34...   155   6e-38

>Medtr3g111540.1 | transmembrane protein, putative | HC |
           chr3:52121922-52125125 | 20130731
          Length = 354

 Score =  531 bits (1367), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 259/372 (69%), Positives = 305/372 (81%), Gaps = 23/372 (6%)

Query: 1   MELKTLCCALPSQPL-----RSQTIGIHSPFKYQRQRFGFGNSSKCLKWVIKEPSLFGLS 55
           MEL+ LCCALPSQPL     RSQ  G  + F+YQ+Q+FGF  SSK  K VIKEPSL GL+
Sbjct: 1   MELQALCCALPSQPLQFSKLRSQAFGTQALFRYQKQKFGFEKSSKSFKQVIKEPSLLGLN 60

Query: 56  KFQRPIVHASESSVNGSLEVHPGESSSVPVVDVNGGLEVLPSRSSGVPVDAYNGVEPFRG 115
           KFQR ++HAS+S+VNG+LEV   +SSSVP   VN G               Y+G+EPF G
Sbjct: 61  KFQRTLIHASDSTVNGALEVELKQSSSVP---VNVG---------------YSGLEPFHG 102

Query: 116 KSGSVSFCGLTHQLVEEGKLESAPFNEEESSYFWLLGPAAFLSCLILPQFFVGNVVEAFF 175
           KSGSVSF GLTHQ VEEGKL SAPF +EESSY W+L P AF+S LILPQFFVG VV AFF
Sbjct: 103 KSGSVSFYGLTHQSVEEGKLVSAPFKQEESSYLWVLAPVAFISSLILPQFFVGTVVAAFF 162

Query: 176 NDMILVDIVSSFTFEALFYIGLATFLHVVDRVQKPYLQFSSKRWGLITGLRGYLSSAFLT 235
           ND+IL DIV+SF+ EALFY+GLATFL V DRVQ+PYLQ+SSKRWGLITGL+GY++SAFLT
Sbjct: 163 NDLILKDIVTSFSSEALFYVGLATFLQVADRVQRPYLQYSSKRWGLITGLKGYITSAFLT 222

Query: 236 MGLKVVVPLLLLYAAWSVARLAVIVAVAPFLAGCVIQFAFEKYLDKRGSACWPLVPIIFE 295
            GLK+ VPLLLLY  WSV R+A +VA+APFL GC  QFAFE++LD+RGS+CWPLVPIIFE
Sbjct: 223 TGLKIAVPLLLLYVTWSVVRMAAVVAIAPFLVGCAAQFAFERHLDRRGSSCWPLVPIIFE 282

Query: 296 VYRLYQLTKAAHFVERLMFSLKGLPATPEILERSGALFAMIVSFQVLGIVCLWSLMTFLV 355
           VYRLYQLTKAA+F E+LM+S+KGLPA+PE+LERSGALF M+V FQ+LGIVC+WSLMTFL+
Sbjct: 283 VYRLYQLTKAANFSEKLMYSMKGLPASPEVLERSGALFGMMVIFQLLGIVCIWSLMTFLL 342

Query: 356 RLFPSRPVADHY 367
           RLFPSRPVA++Y
Sbjct: 343 RLFPSRPVAENY 354


>Medtr3g077500.1 | transmembrane protein, putative | HC |
           chr3:34811954-34816546 | 20130731
          Length = 376

 Score =  155 bits (392), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 168/323 (52%), Gaps = 19/323 (5%)

Query: 43  KWVIKEPSLFGLSKFQRP----IVHASESSVNGSLEVHPGESSSVPVVDVNGGLEVLPSR 98
           K++ + P L G  +FQ+      V + + S N  LE+     + VP  + N   ++ P+ 
Sbjct: 62  KFINRRPQLKG--RFQKQQNALFVVSEDQSQNNELEI----PAPVPENNNNIAQDISPAS 115

Query: 99  SSGVPVDAYNGVEPFRGKSGSVSFCGLTHQLVEEGKLESAPFNEEESSYFWLLGPAAFLS 158
           +    +   +G      K G +SF    ++   E  L ++     +++  W +GPA  ++
Sbjct: 116 NPSFHLSGSDG------KPGFISFYNRPYRRDSEILLLNS--ERSQNNILWFVGPAVLVA 167

Query: 159 CLILPQFFVGNVVEAFFNDMILVDIVSSFTFEALFYIGLATFLHVVDRVQKP-YLQFSSK 217
             I P  ++  ++   F D +L D +  F  EA+FY G+A FL ++D +++P  L  ++K
Sbjct: 168 SFIFPSLYLRKLLSIIFEDSLLTDFLILFFTEAIFYGGVAVFLFLLDHLRRPIQLDTATK 227

Query: 218 RWGLITGLRGYLSSAFLTMGLKVVVPLLLLYAAWSVARLAVIVAVAPFLAGCVIQFAFEK 277
               +    G   S+  T+ L +V+P++ +   W     A    +AP+L G V+QFAFE+
Sbjct: 228 NTDTLPPQLGQKISSVATLVLSLVIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQ 287

Query: 278 YLDKRGSACWPLVPIIFEVYRLYQLTKAAHFVERLMFSLKGLPATPEILERSGALFAMIV 337
           Y   R S  W  +P+IF+VYRL+QL +AA  V  L F+++G   T   +  + +L  ++ 
Sbjct: 288 YARYRKSPSWSAIPLIFQVYRLHQLNRAAQLVTALSFTVRGAELTSHNMAINSSLGTLLN 347

Query: 338 SFQVLGIVCLWSLMTFLVRLFPS 360
             Q LG++C+WSL +FL+R  PS
Sbjct: 348 VLQFLGVICIWSLSSFLMRFIPS 370