Miyakogusa Predicted Gene

Lj1g3v1603220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1603220.1 tr|B7FSI5|B7FSI5_PHATC Lipoate-protein ligase
(Fragment) OS=Phaeodactylum tricornutum (strain CCAP
1,51.69,2e-19,lipB: lipoyl(octanoyl) transferase,Octanoyltransferase;
BPL_LplA_LipB,Biotin/lipoate A/B protein lig,CUFF.27563.1
         (165 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g111580.1 | biotin/lipoate A/B protein ligase family prote...   237   3e-63
Medtr1g106190.1 | biotin/lipoate A/B protein ligase family prote...    69   2e-12
Medtr1g106190.2 | biotin/lipoate A/B protein ligase family prote...    69   2e-12

>Medtr3g111580.1 | biotin/lipoate A/B protein ligase family protein
           | HC | chr3:52140562-52139439 | 20130731
          Length = 227

 Score =  237 bits (605), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 109/137 (79%), Positives = 124/137 (90%), Gaps = 1/137 (0%)

Query: 29  TINAQRTRTCELLDFHHELIPYEVAWSLQKDIVREKKAQIENEGDCSDTLIILQHPSVYT 88
           T   Q  R+CEL+DFH + IPYEVAWSLQKDIV++KK+QI+NEGDC+DTLI+LQHPSV+T
Sbjct: 41  TKTVQCLRSCELIDFHQQFIPYEVAWSLQKDIVKQKKSQIQNEGDCNDTLIVLQHPSVFT 100

Query: 89  LGSGSTTQQNLKFDIENPPFHIHRTERGGEVTYHGPGQLVMYPIINLRRHKMDLHWYLRT 148
           LG+ S+   NL FDI+NPPFHIHRTERGGEVTYHGPGQLVMYPIINLR+HKMDLHWY+R 
Sbjct: 101 LGTASSND-NLNFDIQNPPFHIHRTERGGEVTYHGPGQLVMYPIINLRKHKMDLHWYMRK 159

Query: 149 LEEVVIRVLSSTFSIQA 165
           LEEVVIRVLSSTFSIQA
Sbjct: 160 LEEVVIRVLSSTFSIQA 176


>Medtr1g106190.1 | biotin/lipoate A/B protein ligase family protein
           | HC | chr1:48057653-48059112 | 20130731
          Length = 235

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 8/121 (6%)

Query: 47  LIPYEVAWSLQKDIVREKKAQIENEGDCSDTLIILQHPSVYTLGSGSTTQQNL--KFDIE 104
           ++ Y  A  LQ+ +V ++K+         DTL+ LQHP  YT+G   T    L  + ++E
Sbjct: 14  VVNYLDALKLQEKLVLDRKSHKR-----CDTLLSLQHPPTYTVGKRQTVHNLLIPQSELE 68

Query: 105 NPPFHIHRTERGGEVTYHGPGQLVMYPIINLRRHKMDLHWYLRTLEEVVIRVLSSTFSIQ 164
                +H T+RGG++T+HGP Q ++YPII+LR   +    ++  +E  +I  L+  + ++
Sbjct: 69  QIGAELHYTQRGGDITFHGPHQAILYPIISLRDTGLGARKFVEKIESTMIE-LAGLYGVK 127

Query: 165 A 165
           A
Sbjct: 128 A 128


>Medtr1g106190.2 | biotin/lipoate A/B protein ligase family protein
           | HC | chr1:48056127-48059112 | 20130731
          Length = 235

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 8/121 (6%)

Query: 47  LIPYEVAWSLQKDIVREKKAQIENEGDCSDTLIILQHPSVYTLGSGSTTQQNL--KFDIE 104
           ++ Y  A  LQ+ +V ++K+         DTL+ LQHP  YT+G   T    L  + ++E
Sbjct: 14  VVNYLDALKLQEKLVLDRKSHKR-----CDTLLSLQHPPTYTVGKRQTVHNLLIPQSELE 68

Query: 105 NPPFHIHRTERGGEVTYHGPGQLVMYPIINLRRHKMDLHWYLRTLEEVVIRVLSSTFSIQ 164
                +H T+RGG++T+HGP Q ++YPII+LR   +    ++  +E  +I  L+  + ++
Sbjct: 69  QIGAELHYTQRGGDITFHGPHQAILYPIISLRDTGLGARKFVEKIESTMIE-LAGLYGVK 127

Query: 165 A 165
           A
Sbjct: 128 A 128