Miyakogusa Predicted Gene

Lj1g3v1603210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1603210.1 Non Characterized Hit- tr|I1M8H4|I1M8H4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,97.73,5e-18,SUBFAMILY
NOT NAMED,NULL; SEC3/SYNTAXIN-RELATED,NULL; Sec3,Exocyst complex,
component Exoc1,CUFF.27562.1
         (258 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g111590.1 | exocyst complex component SEC3B | HC | chr3:52...   458   e-129
Medtr1g021680.1 | exocyst complex component SEC3B | HC | chr1:65...   451   e-127
Medtr3g082900.1 | exocyst complex component sec3A | HC | chr3:37...   101   6e-22

>Medtr3g111590.1 | exocyst complex component SEC3B | HC |
           chr3:52159615-52142380 | 20130731
          Length = 878

 Score =  458 bits (1178), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 223/259 (86%), Positives = 236/259 (91%), Gaps = 6/259 (2%)

Query: 1   MLTIFIPLLVDESSFCAHFMCFEVPTLDANKSGYKDDANDDDLGIEDIDENDS--KSGKN 58
           MLT+FIPL+VDESSF AHFMCFEVP LD NKSG+ DD   DDLGI DIDENDS  KSG +
Sbjct: 512 MLTVFIPLMVDESSFFAHFMCFEVPMLDVNKSGHNDD---DDLGIADIDENDSNSKSGIS 568

Query: 59  SAELAALNESLQDLLDGIQEDFYAVVDWAFNLDPLCCISMHGTTERYLSGQKNDAAGFVR 118
           SAELAALNESLQDLLDGIQEDFYAVVDWA  +DPLCCISMHG TERYLSGQK DAA FVR
Sbjct: 569 SAELAALNESLQDLLDGIQEDFYAVVDWACKIDPLCCISMHGITERYLSGQKADAARFVR 628

Query: 119 LLLGDLESRISMQFSRYVDEACHQIERSERNVRQTGVLPYIPRFATLATRMEQYITGQSR 178
           LLLG+LESRISM F R+VDEACH IERSERNVRQ+ VLPYIPRFATLAT+MEQYI GQSR
Sbjct: 629 LLLGELESRISMLFIRFVDEACHNIERSERNVRQS-VLPYIPRFATLATKMEQYIAGQSR 687

Query: 179 DLVDQAYTKFVSIMFVTLEKLSQTDPKYADIFLIENYAAFQNSLYDLANVVPTLAKFYHQ 238
           DLVDQAY KFVSIMFVTLEKL+Q +PKYADIFLIENYAAFQNSLYDLANVVPTLAKFYHQ
Sbjct: 688 DLVDQAYMKFVSIMFVTLEKLAQVEPKYADIFLIENYAAFQNSLYDLANVVPTLAKFYHQ 747

Query: 239 ASEAYEQACTRHISMIIYY 257
           ASEAYEQ+C+RHISMIIYY
Sbjct: 748 ASEAYEQSCSRHISMIIYY 766


>Medtr1g021680.1 | exocyst complex component SEC3B | HC |
           chr1:6557770-6543295 | 20130731
          Length = 884

 Score =  451 bits (1160), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 226/263 (85%), Positives = 236/263 (89%), Gaps = 10/263 (3%)

Query: 1   MLTIFIPLLVDESSFCAHFMCFEVPTL-------DANKSGYKDDANDDDLGIEDIDENDS 53
           MLTIFIPLLVDESSF AHFMCFEVPTL       + NK+GY DD +     I DIDENDS
Sbjct: 513 MLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVVNGNKAGYDDDDDLG---IMDIDENDS 569

Query: 54  KSGKNSAELAALNESLQDLLDGIQEDFYAVVDWAFNLDPLCCISMHGTTERYLSGQKNDA 113
           KSGKNSAELAALNESLQDLLDGIQEDFYAVVDWA+ +DPL CISMHG TERYLSGQK DA
Sbjct: 570 KSGKNSAELAALNESLQDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADA 629

Query: 114 AGFVRLLLGDLESRISMQFSRYVDEACHQIERSERNVRQTGVLPYIPRFATLATRMEQYI 173
           AGFVRLLLGDLESRISMQFSR+VDEACHQIER+ERNVRQ GVL YIPRFA LATRMEQYI
Sbjct: 630 AGFVRLLLGDLESRISMQFSRFVDEACHQIERNERNVRQMGVLSYIPRFAILATRMEQYI 689

Query: 174 TGQSRDLVDQAYTKFVSIMFVTLEKLSQTDPKYADIFLIENYAAFQNSLYDLANVVPTLA 233
            GQSRDLVDQAYTKFVS+MF TLEK+SQTDPKYADIFL ENYAAFQNSLYDLAN+VPTLA
Sbjct: 690 QGQSRDLVDQAYTKFVSVMFTTLEKISQTDPKYADIFLFENYAAFQNSLYDLANIVPTLA 749

Query: 234 KFYHQASEAYEQACTRHISMIIY 256
           KFYHQASEAYEQACTRHISMIIY
Sbjct: 750 KFYHQASEAYEQACTRHISMIIY 772


>Medtr3g082900.1 | exocyst complex component sec3A | HC |
           chr3:37420183-37420460 | 20130731
          Length = 63

 Score =  101 bits (252), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 50/64 (78%), Positives = 54/64 (84%), Gaps = 1/64 (1%)

Query: 98  MHGTTERYLSGQKNDAAGFVRLLLGDLESRISMQFSRYVDEACHQIERSERNVRQTGVLP 157
           MHG TE YLSGQK DAA FV LLLG+LES+IS+ F R+VDEACH IERSERNVRQ  VLP
Sbjct: 1   MHGITEHYLSGQKADAARFVLLLLGELESQISILFIRFVDEACHNIERSERNVRQC-VLP 59

Query: 158 YIPR 161
           YIPR
Sbjct: 60  YIPR 63